Etheostoma spectabile (orangethroat darter): 116701494
Help
Entry
116701494 CDS
T08457
Symbol
sdc3
Name
(RefSeq) syndecan-3 isoform X1
KO
K16337
syndecan 3
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04514
Cell adhesion molecule (CAM) interaction
esp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116701494 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116701494 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
esp00535
]
116701494 (sdc3)
Proteoglycans [BR:
esp00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
116701494 (sdc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
LST2_mid
Trypan_PARP
GAP45
Motif
Other DBs
NCBI-GeneID:
116701494
NCBI-ProteinID:
XP_032391113
LinkDB
All DBs
Position
14:3040672..3070027
Genome browser
AA seq
471 aa
AA seq
DB search
MKLPWLLALTALLAHTATGQTWSPSIDDEGSARDEFYDDEDLYSGSGSGFPELSISPTSV
GVSLTTEEPLLLSTTQATGPAPSASPAVEPSPNPEDPTGPPLPTEADGESGVFWDREREH
EKEKELERERENEQERLRELEKEREKQLERERERERERERVREMEREREKERERERERER
EREREKERERQRERELERERELERIKATSQTTAVPRSPVAITVVTTNQATSPAESTAPSA
GWDDLSTTEEEEDVYLSPEPSTFFPGFDMETTTEEDTSTTTETTPEPTTAAPTTAAATTT
VKTRVPFRPRVPMTTDTLAVPTERTSRPQQPTATQEGNNEAGAAGPSGDFEIRDDRRNDL
GRGIMPVDPDLIGNTVDGGSSAAQLPQKNILERKEVLIAVLIGGLLAVVFADFLVIAVIV
GGVVGALFAAFLVMLLVYRMKKKDEGSYTLEEPKQATVTYQKPDKQEEFYA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgccttggctactggcgctcacagcgctgctcgctcataccgccacgggacag
acgtggtcgccgtctatcgatgacgaaggctcggcgagagacgagttctacgacgatgag
gacctttactcaggctccggctctggctttcctgagctcagtataagtccgacatctgtg
ggtgtgtccttgaccacagaagagcccctcctcctctccaccacccaagccaccggcccc
gccccctccgcctcacctgcagttgagccgagccccaacccggaggaccccactggcccc
ccgctgcccaccgaggccgatggagaaagtggtgtgttctgggatagagagagagagcat
gagaaggagaaagagttagagagggaaagagagaatgagcaagagaggctgagggaactg
gagaaggagagggagaaacagttggagagggagagagagagggaaagagagagggagcgg
gtccgagagatggagagagagagggaaaaggagagagaacgtgagagagagagggaacgt
gagagagagcgagagaaagagagagagaggcagagagagcgtgagcttgaaagagagaga
gagcttgagcgaatcaaggccacctcgcagaccaccgccgtcccacgatcccctgttgcc
attaccgtggtgaccaccaaccaggcaaccagccctgcagaaagtacagcgccctctgcc
ggttgggatgacctgagcaccacagaagaagaagaggatgtctacctgtcacctgaaccc
tcaacgtttttcccaggcttcgacatggaaaccaccacagaggaagacacatccaccaca
acagagactacccctgagcccacgacagctgcacccaccaccgccgccgctactactact
gtcaaaaccagggtccccttcaggcccagagttcccatgacaacagatactctggcggtg
ccaacagagagaactagccgcccacagcagcccacagctacacaggagggtaacaacgag
gcgggtgctgcaggaccgagtggagatttcgaaatccgtgatgatcggcgtaatgatctt
ggtcgaggtataatgccagtggatcctgatctgattggtaacacagtggatggagggagc
tctgccgcccagctgccacagaagaacatcctggagagaaaagaggtcttaatagctgtt
ctgattggtggactgctggcggtggttttcgctgatttcctggtcatcgcggtgatagtg
ggaggagtagtgggcgccttgtttgctgccttcctggtgatgttgctggtgtacaggatg
aagaagaaggacgagggcagctacacactagaggaacccaaacaggccaccgtcacctac
cagaaaccagacaagcaggaggagttttacgcataa
DBGET
integrated database retrieval system
