Etheostoma spectabile (orangethroat darter): 116701511
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Entry
116701511 CDS
T08457
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116701511 (trim71)
04121 Ubiquitin system [BR:
esp04121
]
116701511 (trim71)
Enzymes [BR:
esp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116701511 (trim71)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116701511 (trim71)
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116701511 (trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
ANCHR-like_BBOX
SGL
TEN_NHL
zf-RING_5
zf-C3HC4
Ig_GEX2_N
zf-RING_2
Invasin_D3
Motif
Other DBs
NCBI-GeneID:
116701511
NCBI-ProteinID:
XP_032391140
LinkDB
All DBs
Position
14:complement(11288301..11325413)
Genome browser
AA seq
837 aa
AA seq
DB search
MLQMASFPDTDLQTCPLCKELCGSSAPISSSSSTSSSSSHTSSSSSQTNRRLHVLPCLHA
FCRQCLEGQRSPGDPLKLRCPTCDQKVCISEAGVDSLPSSNFLFSNLLDVVVSSEEHIQN
KNGHHHHHQRGGLGGGSSGFHHPNHGGLLHPNHLGEPQCSSCDEENPATSHCLDCQEYLC
DNCVRAHQRVRLTKDHFIERLGENLHLGRINVNNNPGQPGVSVSLAQSLQNNFALLSLFQ
DHMSFCQHHDNEVFLFFCESCSVPICRECSVGRHMGHTFIYLQDAVQDCRAITIQLLADA
QQGRQAVQLSMEKVQAMAEQVEIKAKVVQTEVKALVLKHKKALEERECELLWKVEKIRQV
KAKSLYLQVEKLHQSLTKLDSTIAAVSQVLDEGRHLDVLLARERMLTQIHELKALRSLLQ
AQEDDRFMFTPPDQALYIAIQSMGLISSGAFAPVTKAHGEGLKSALRGKPASFTVIGYDH
DGEPRLSGGDTVSAIVMSVPDNNLSAAEVTDHQNGSYTVSYLPKTEGEHLVSVLVCNQHI
QGSPFKVTVKSGRSYGSLGSQVSSFGCEGEGDGQLCRPWGISVDKEGYVVVADRSNNRIQ
IFKPCGAFHHKFGSLGSRPGQFDRPAGVACDSQRRIIVADKDNHRVQVFTFEGQFLLKFG
EKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRVQLFAHDGSFLNKYGFEGALWKHFDSPR
GVAFNHEDHLVVTDFNNHRLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQENRIIVA
DSRNHRVQVFEPNGNFLCKFGTQGSSFGHMDRPSGVAVTPDGVIVVVDFGNNRILKF
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagatggcttcgttcccagacacggacctgcagacctgcccgctctgcaaggag
ctgtgcggctcttctgctcctatttcttccagctcttctacctcttcatcttcctcacat
acctcatcctcctccagccagaccaacaggaggctccacgtcctgccctgcctccatgcc
ttctgcaggcagtgtctagagggccagcgcagtccaggggacccgctgaagctacggtgc
cccacctgtgaccagaaggtgtgcatctctgaggccggagtggactccctgccttcctcc
aacttcctcttcagcaatctgttggacgtggtggtgagctccgaggagcacattcagaac
aagaatggccaccaccaccaccaccaacgcggaggcttaggtggaggctcctctggcttc
catcaccctaatcatggaggccttctgcatcctaaccacctgggagagcctcagtgcagt
tcctgtgacgaggagaacccagccacctcccactgccttgactgccaggagtatctgtgt
gacaactgtgtgcgggcgcaccagagggtgcggctgaccaaggaccacttcatcgagcgc
ctgggagagaacctccaccttggccgcatcaatgtcaacaacaacccgggccagccaggg
gtttcggtgtctctcgcccagtccttgcagaacaactttgccctgctgtccctgttccag
gaccacatgagcttctgccaacaccatgataatgaggtgtttctgttcttctgtgaatcc
tgctcggtgcctatctgtagggagtgcagtgttggccggcacatgggccacacctttatt
tatctacaagatgccgtacaggactgcagggccatcaccatccagctgctggcagatgca
cagcagggacgtcaggctgtgcagctaagcatggagaaggtccaggccatggcagagcag
gtggagatcaaagccaaggtggtgcagactgaagtgaaggcccttgtgctcaaacacaag
aaagcgctggaggagagggagtgtgaactactgtggaaggtggagaaaatccgtcaggtg
aaggctaagtctctgtacctgcaggtggagaaactgcaccagagtctgaccaagttagac
agcaccatcgcggccgtcagccaggtgctggatgagggccgccacctcgacgtgctgctg
gccagagagcgaatgctcacccagatccatgaactcaaggctttgaggagcctgctgcag
gcgcaagaggatgaccgcttcatgttcactcctccagaccaggctctgtacatagctatc
cagtcaatgggcctaatcagcagtggagcctttgccccggtcaccaaagcccatggtgag
ggtctgaaaagtgcgctacgcggcaagcccgcatccttcactgtgattggatatgaccat
gatggcgagccacgtctttccggcggggacacggtgtctgcaatagtcatgtcggtccca
gacaataacctgtctgcagcggaggtaacggaccaccagaatggctcctacaccgtcagc
tacctgcctaaaactgagggggagcacctcgtgtcggtgttggtgtgtaaccagcacatc
cagggcagccccttcaaggtgaccgtgaagtcagggaggagctacggctccctgggctcc
caggtttcttccttcgggtgcgagggggagggagatggtcagctgtgtcgtccctggggc
atcagcgtggacaaggagggctacgtggtggtggccgatcgcagcaacaaccgcatccag
atcttcaagccttgcggtgccttccaccataagtttggctctctgggttctcggcctggt
cagtttgaccgtccagcgggggtcgcgtgtgacagtcagagacgaatcattgtggctgat
aaagacaatcaccgtgtgcaggtgtttacttttgagggccagttcctgctgaagtttggg
gaaaagggtactaagaatggacagtttaactatccctgggatgtggctgtgaactctgag
ggtaagatcctggtctcggacaccaggaaccaccgtgtgcagctcttcgcccacgacggc
tctttcctcaacaagtacggctttgaaggggccctgtggaaacactttgactctccccga
ggagtggcctttaatcacgaagaccacctggtggtgaccgacttcaacaaccacaggctc
cttgtcatccgaccggactgccagtcagctcgctttctgggctctgagggcaccgggaac
gggcagtttctgcgcccccagggcgtcgcggtggaccaggagaaccgtatcattgtggcc
gactcccgcaaccaccgagtccaagtgtttgagcccaatggaaacttcttatgcaaattt
ggcactcaagggagtagctttggacacatggatcgcccctccggtgtggcggtgacgcct
gacggggtcattgtagtggttgactttggaaataatcgcatcctcaagttctaa
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