Etheostoma spectabile (orangethroat darter): 116701660
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Entry
116701660 CDS
T08457
Symbol
snx27
Name
(RefSeq) sorting nexin-27 isoform X1
KO
K17936
sorting nexin-27
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116701660 (snx27)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
esp04990
]
116701660 (snx27)
Membrane trafficking [BR:
esp04131
]
Protein recycling
Others
Others
116701660 (snx27)
Domain-containing proteins not elsewhere classified [BR:
esp04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
116701660 (snx27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
RA
SNX17-27-31_F1_FERM
RA_2
VirE3
SNX17-31_F2_FERM
PDZ_2
SNX17_FERM_C
TetR_C_26
USP7_C2
DarA_N
Motif
Other DBs
NCBI-GeneID:
116701660
NCBI-ProteinID:
XP_032391398
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All DBs
Position
14:14658326..14675431
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AA seq
570 aa
AA seq
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MADVGDDETRSTLPSASRNGPVVGSSAGTAGHNAACIMVTSGPRTVRIVKSESGYGFNVR
GQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGIAKGDRILAVNGVSVEGATHKQVV
DLIRAGEKELVLAVLSVPAQEADGLEGGEDVQPNYDYSDKQAVPISIPTYKHVEQHSERF
VVYNVYMSGRQLCSKRYREFAILHQNLKREFSNFNFPKLPGKWPFSLSEQQLDARRRGLE
EYLERVCSVRVIGESDIMQEFLSESDENYNGVTDVELRIALPDKTTISVRVRKNSTTDQV
YQALVIKVGMDSIMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLALRKW
LFSFQEEELLRDNPLALHYCFHQALEDVKKGFIKTEDKSYQLQKLAEQRKMATYLSLLRT
CEGYNEVAFPHCSCDSRRKGHVITAISIHHFKLHACTEDGTLENQVIAFEWAEMQRWDTD
EEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKQVEEEASDKDNKNCS
NNAQDQQYKCVDKQLQGMRMSEQPLEFRYR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtaggagacgatgaaactcggtcgactctcccttcggcatcccgtaacggt
ccagttgtcggttcgtctgcgggcaccgcgggccataacgcagcttgcataatggtaacg
tcaggtccgcggacggtgagaatcgtcaagtcggagtctggctacggtttcaacgttcgc
ggtcaagttagtgaaggaggacagcttcggagcatcaacggggaattgtacgctcctctt
cagcatgttagcgctgttttgcccggaggtgcggcagaccgagctgggatagcaaagggt
gacaggatcctagcggttaatggggtgagtgtggaaggtgccacccataagcaggtggtg
gacctgattcgtgcaggggagaaggagctggttctggctgtgctgtctgttccagcacag
gaggctgatggattggaaggaggagaagatgtccaacccaactatgactacagtgacaaa
caagcagtgcccatttccattcctacatacaaacatgtagagcagcactccgagaggttt
gtggtgtacaacgtgtatatgtccggtagacagctgtgctcaaagcgctaccgagagttt
gccatcctgcaccagaacctaaagagggaattctccaacttcaacttcccaaaacttcct
ggtaaatggcccttctccctgtctgaacagcagttggatgctcgccgtagaggactggag
gaatatcttgagcgagtttgctctgtgcgggtgattggggaaagtgacatcatgcaggag
tttctctctgaatcagatgagaactacaatggcgtgacagatgtagagctgcggatagcc
ctgccagacaagaccaccatttctgtcagagtccgcaagaacagcaccacagaccaggtg
taccaggcattagtgataaaggttggaatggacagtattatggcgagctactttgccctt
tttgaagtcatcaaccactcgttcgtgcggaagctggcgcctaatgagtttccacacaag
ctttatgtgcagaattacacctcggcagtgccggggacttgcttggcgctccgcaaatgg
ttgttcagcttccaggaggaggagttgctaagagacaacccactggcactgcactactgc
ttccaccaggcactggaagatgtgaagaagggattcataaaaacagaggacaaatcctac
cagctgcagaagctggcagagcagcgcaagatggccacgtacctgagtttgttgcggaca
tgtgaaggctacaatgaggtggcgttcccccactgctcctgtgactccaggaggaaggga
catgtcattacagctatcagcatccatcacttcaaactgcatgcttgtaccgaggacgga
acgctggagaaccaggtgatagcttttgagtgggcggagatgcagcgctgggacactgat
gaggaagggatggctttctgctttgaatacgccagaggagagaagaaacctcgctgggtc
aagatcttcactccatattttaactacatgcatgagtgctttgagcgggtcttttgtgag
ctgaagtggaggaaacaggttgaggaagaggcatctgacaaagacaacaaaaactgcagt
aacaatgcacaagaccagcaatacaagtgtgtggacaagcaactgcaaggcatgaggatg
agtgagcaacctttggagttcagatacagataa
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