Etheostoma spectabile (orangethroat darter): 116701693
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Entry
116701693 CDS
T08457
Symbol
sema6d
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
esp
Etheostoma spectabile (orangethroat darter)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
116701693
NCBI-ProteinID:
XP_032391478
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Position
1:16966115..16986839
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AA seq
1110 aa
AA seq
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MGQRAALLLSELLLLLLTASRTLLAVSFPEDTAPLDVVDAHFSRRYPVFRGRPSGNESQH
RLDFQLMTKIQDTLFIAGRDQVYLVSLRESYRNEIIPYRKLTWRSGQADRDMCAIKGKHR
DECHNFIKVLVPRNDDLVFICGTNGFNPMCRYYRLDNLEFDGEEINGLARCPFDSKQTNV
ALFAEGKLYSATVADFQASDSVIYRSMGDGSALRTIKYDSKWLKEPHFLHAAEYGNYVYF
FYREIAVEHSNLGKVVYSRVARICKNDVGGSQRVLESHWTSFVKARLNCSVPGESFFYFD
VLQSITDIIDINGVPSVVGVFTTQMNSIPGSAVCAFSMADIEKVFWGRFKEQKTPDSVWT
PFPEERLPKPRPGCCAGHGPAASLKSSIEFPDDTLQFIKSHPLMDTAVPSIGDEPWFTKT
RVRYRLTALAVDNEAGPHKNYTVVFIGAESGVVLKVLAKTSSVSLNDSLLLEEIEVFNRA
KCLSNHEDDKRVLSLHVDKEAHSLYVAFSSCVIRIPLSRCERHSSCHKSCIASRDPYCGW
KPHGACERIQPGVLTGYEQDIEFGNTAHLGDCQAFLGTTSAPDYKSFGDPTSDMEFSSTP
VTVHPSEPLKPPVLIPTQSPSSGPGPELYGSGFVLQDDPATSHSLDSIPGGQEGVWDIQA
GETNQMVHMNILITCVFAAFLMGALLAGLIVFCYRDSFLRKPRHVHKDAESAPSGSDSTG
SFVKLNGLFDSPVKEYQTNIDSPKLYTNLLSNSKDLNSPNGDTKTMILRDGCQPPELAAL
PTPESTPVLQQKSLQPIKNQWERAHGKASGPRKESNSSAKNPQFLPSSSSAPPTSNSNHP
PLALGHSHIPSAVVLPNATHDRSNLDNGDDTLPHSSERKLKNPDSKGSRKDQKRSVDARN
TLNDLLKHLNDSVANPKAILQEGSGPRPRQQLTLEPMEELTELPPKVPSREASLYSPSSS
LPRHSPTKRVDVPMPTTPTTPTGSLSMGGTLERQRGGYQLHRSASHRQSLSTSPNGVTMG
VSVSRQHSMNRGGYMPPKPPSRLDSQGGVMGAGLHSAHPSSIPRQTYSGYGSLPRTGLKR
TPSLKPDVPPKPNGFSPQTPQMRVVNKYSY
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgggccagagagctgcgcttctgctcagtgagctgctgctgctgctgctgacagcgtca
cgcactctcctcgcagtcagcttccccgaggacaccgcacccctcgatgtcgttgacgca
cacttttcacggcggtaccctgtgttcagaggcaggccctctggcaacgagtcacagcat
cgccttgactttcagctgatgaccaagatacaggacactctgttcatcgctggcagagat
caggtgtacctggtcagtctgagagaatcctacaggaatgagatcattccttaccggaag
ctgacatggcgatcgggccaagctgacagagacatgtgtgctatcaagggaaaacacaga
gacgagtgccacaactttatcaaagtgctggttcccagaaacgatgaccttgtgttcatc
tgtggtaccaacggcttcaaccccatgtgcagatactacaggctggataacctcgagttt
gatggggaggagatcaatggactggcacgatgcccatttgactccaagcaaaccaacgtt
gcccttttcgctgaggggaagctgtattcggcaactgtagccgacttccaggccagtgat
tctgtcatctatcgcagtatgggtgatggatcagccctaaggaccatcaaatatgactcc
aaatggctgaaagaacctcatttcctgcacgcagcagagtacgggaattatgtgtacttt
ttttaccgagagattgcagtggagcacagcaatctgggcaaggttgtatattcccgtgtg
gcgcggatctgtaagaatgatgtcggtgggtcacagcgggtgctggagagtcactggaca
tcttttgtaaaggcaaggctgaattgttcagtaccaggggagtccttcttctacttcgat
gtgcttcagtcaatcactgatatcatcgacatcaacggagttccttcggtggtgggtgtg
ttcaccacgcagatgaacagtatcccagggtcagctgtttgcgccttctccatggccgac
atagagaaagtattctggggtcggttcaaagagcagaagactcctgactctgtgtggact
ccatttccagaggagaggctgcccaaacctcgacccgggtgctgtgcaggtcatggtcca
gctgcatcgttaaagagctccatcgagttcccggacgataccctgcagttcatcaagtcc
caccccctcatggacacagctgtgccgtctattggggatgagccttggttcaccaagact
cgcgtcaggtaccgactgacagcgctggctgtggacaatgaagcaggacctcacaagaac
tacaccgtggtgttcatcggggctgagtcaggggttgtcctcaaggttttggccaagact
tcctctgtgtctctgaacgacagcctgcttctggaggagatagaggtcttcaacagggcc
aagtgcctgtccaaccacgaggatgacaagcgtgtcctctcgctgcacgtggacaaagag
gcacacagcttgtatgttgccttttcaagctgtgtcatccgtattcccctgagtcgctgt
gaacggcattcttcctgccacaagtcttgcattgcatcaagggatccttactgcggctgg
aagcctcatggggcatgtgagaggatacagcctggtgttttgactggatatgagcaggac
attgagtttggaaacactgcccacctgggagactgtcaggcgtttttgggcactacatca
gcgccagattacaaatcatttggcgaccctacctctgacatggagttttcatcaacgcca
gtcactgtccaccccagtgagcccctaaagcccccagtactcatacccactcagagcccc
agctctgggcctggtccagagctctacggctcaggctttgtgctgcaggatgacccagcc
acctcccattctttagactctatcccaggggggcaagagggtgtgtgggatatccaagca
ggtgagaccaaccagatggtccacatgaacatcctcatcacttgcgtgtttgctgctttt
ctcatgggtgctctcctggctggtctgattgttttctgctaccgagactcattcctccgt
aagcctaggcatgtccacaaggatgcagagtctgcaccttctggctcagactccactgga
agctttgtcaagctcaacggcctctttgacagccctgtcaaggagtaccagaccaacatt
gattctcccaagctctacaccaatctgctgagcaacagcaaagacctgaattcacccaac
ggagacaccaaaactatgatcctgcgggatggctgtcagccccctgagctggctgccctg
cctacacctgagtccactccagtgcttcagcagaaaagcctgcagcccatcaaaaaccag
tgggagagggctcatggaaaggccagcgggcctcgtaaggagtccaactcatcagccaag
aatcctcagttccttccttcttcttcttctgctcctcctacctccaactccaaccaccct
cccctcgctttgggtcactcccacatccctagtgcggttgtcctgcccaatgccacacat
gaccgatctaaccttgacaatggagatgatacattgccacattcatctgagaggaagctg
aagaaccccgattctaagggaagtaggaaagaccagaaaaggtctgtggatgccagaaat
accctaaatgaccttttaaaacacctaaatgactcagtggccaaccccaaggcaattctt
caagagggatcagggcctcgcccaaggcaacagctcacactggagcccatggaggaacta
acagaattaccccccaaggtgcccagccgtgaggcttccctgtactctccctcctcatcc
ctgccaaggcacagccccaccaagagggtagatgtgcccatgcctacaactcccacaaca
ccaacgggcagtctgagcatggggggcaccctggagagacaaagaggggggtatcaactc
caccggagtgcctctcacaggcaatccctatccacctcaccaaatggggtaaccatgggg
gtgtctgtgtctcgacaacatagtatgaacagagggggttacatgcccccaaagcccccc
tccagactcgactcccaaggcggagtgatgggggcaggattgcactcagcccacccatcc
tctataccccgacagacatatagtgggtatggctcactccctcgcacagggcttaaacgg
accccatcactaaaaccagatgtgccccctaaacccaatgggttttcaccacagactcca
cagatgcgagtggtcaataagtacagttattaa
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