Etheostoma spectabile (orangethroat darter): 116701842
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Entry
116701842 CDS
T08457
Name
(RefSeq) uncharacterized protein LOC116701842
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04020
Calcium signaling pathway
esp04080
Neuroactive ligand-receptor interaction
esp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116701842
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116701842
04082 Neuroactive ligand signaling
116701842
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116701842
Ion channels [BR:
esp04040
]
Ligand-gated channels
Glutamate (ionotropic)
116701842
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
DUF8168_N
Motif
Other DBs
NCBI-GeneID:
116701842
NCBI-ProteinID:
XP_032391739
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All DBs
Position
14:23863665..24118394
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AA seq
2005 aa
AA seq
DB search
MVAPRPALSLLLAVLACTGPVRPSPPLLLRPQERERDSGGVNIAVVHSGSSLLPETPVVG
GTGIGETGTGSGQGQGPGPGNGPGGGGGGVGGGGVGGGGGGGGGGGRGVTDTASLEGAAA
MAFFSSSFSTSLSMAALVGETVMTPSGQANVIYLAVNEISPGSLLLQLCELLATTPLQGL
VFEEERPPPPNRAPLAPMLEFVSAQTGVPVVAVGGGASLGREPQESGSIYLQFTCSTSLQ
LEVIFEVLEEYDWTSFSVVTTRHHGYEDFLAMVEGMTDGSFIGWEKKSVVILNVTDDPGG
ARTKRLLKDNEAQVRLLYCSLEEAELVFRAALAAGQAGSSHMWFAVGPALSGLGLEGLPK
ALFAIRPQGWRDEPRRRIAKGVSVLTHGAMALRRDLGTNSRSQYAGNCQSDANQTHRVPD
RIRYFSNISLGGRDYSFNSDGYLSKPLLDVISYTNGRGWEEVGWWENGHLRLRYHPWSRY
GPFLKPLEDSQHLRVVTLEERPFVIVEPADPGTSSCIRDSVPCRMPVNTSLVVDGTGPTK
HCCKGFCIDVLKRLAKIVGFTYDLYLVTNGRHGKNIDGEWNGMVGEVVSNRADMAIGSLT
INEERSEVVEFSVPFVETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLSVVAVTV
FIFEFFSPVGYNRSLQSAKKSGGSKFTIGKSVWLLWALVFNNSVPVENPRGTTSKIMVLV
WAFFAVIFLAXXXXNLAAFMIQEEYIDTVSGLSDKKFQQPAEQYPPLRFGTVPNGSTEEN
IRSNYPNMHQYMIRNNQKGVEEAIENLKTGKLDAFIYDAAVLNYMARKDEGCKVMTIGSG
KVFATTGYGIALHKNSRWKRPLDLALLQLVGDDEIDMLERLWLSGICHNDKIEVMSSKLD
IDNMAGVFYMLLVAMGLSLLVFAWEHLVYWKLRHCVKRSGGMDFLLALSRGMYSCCQFED
ETAPGGSKSSLPQYHTMTTMSTMPAGSQHLVTATVNNTAAIAMVQQQQKHHHQQQQQGPT
YTTMLPGSPPTIGHSAMALGPSNSPLLEGPMPCSTFLPRHDRRLAVVDRWNRSKPEKVMS
GGSGGGVGVGGIAGGITELQVPQYQPNLGQHWSLQVAGGAGGGGDTSLDEYKRYYGPIDP
EGLGVTSDQQTGGPQQTPKANPRGPKASGISRPPSKGLQQGPQQGPGHLISKPPPLMPCS
PRRPPFWRRGSLTQARKKSLGGPLYENILPLGRRGGGRYGASDGGGRRGRRPPPPPLPVP
LSTPTHTPTTPSSPCRFYSSCSSASSSSSSSTSTSSSSSSSVSLSRSNSPFSCSSDSSYN
SSLSFRYRAGDRDFTVDDDYDSDLLTEESSLLLGSRKKIRSRRMSSRSLPCSPPPPPIPP
RKPRPQKDFGRERTGSQLAQLQEWWASWGERERARGGTTSRGDGTVSRLDKRHHKERERE
RKRRKKGRKKKKREERERERERKRRKAKKRKKDDKVKKRERKRSVQEGGDAEKREELKSG
IADYPSYPPLRRESFRKKSESSIRSYGWNISGEEERKEREEKERDDGEESRGKERETRRR
NSKHYHSSGAKPSTSVKFWGGVNPSSVTIPSAFLPLLPVSSKRRKSKSSDRDAVGMEGER
RPLLGRDGRGEIHSKEGLSFHKWGSEVECEGEDSELERRKAGRGKRRGGGRTMSDDERER
DKVVGIYSDDDGSSGEFGKFERYWEDREGRAVGGIGGGGWFFSTYPSREKAGSINSRDDL
FLERGERWGTAESGWGSGGGRGGERGWGSGSQWPPPPLTPPPPRRYWSVDKLHMQDEKKS
KRKSKEKGRGHAACSSCHSPRHHPHSHSSKWARVTSQSQEELYQQSQSFGGPLKPKQESS
SSSKPDRSQNPSKSGSQSNLSIQQRTQRTERDRDRGRQSSPPPNIIPNLPPPLPALPAPP
SSSHPIHVPPPTSSSSVSSPSVVSSTPGAPQPSSMASASAKLQYQRLRSVPQPQRFPQSP
HLPLKAKSLCSRRGSAHFSSVESEV
NT seq
6018 nt
NT seq
+upstream
nt +downstream
nt
atggtggccccaaggcccgccctctcactgctgttggctgtcctggcctgcacggggcct
gtgcgcccctcgccccccctactgctgcggccccaggagagagagagggactcgggtggg
gtcaacatcgctgtggtccactcgggctcctccctgcttccggagacgccggtggtggga
ggcacggggataggcgagacggggacggggtcagggcaggggcaggggcccggtccgggg
aacggcccggggggaggtggtggaggagttggaggtggtggagtaggtggcggaggtgga
ggaggcggaggaggaggaaggggagtaacggatacagcttcgttggaaggagcagctgcg
atggcctttttttcctcctccttttcaacatccctgtcgatggcggcgctggtgggggag
acggtcatgacgccgtcggggcaggccaacgtcatctacctggctgtgaatgagatcagc
ccgggcagcctgctgctgcagctgtgtgagctgctggctacaacaccattgcagggtttg
gtgttcgaggaggagcgaccgccgccgccaaaccgtgcccccctggcccccatgctggag
tttgtctccgcccagacgggggttcccgtggttgccgtagggggaggggccagcctggga
cgagagccacaggaaagtggctcaatctacctccagttcacctgctccacctccctccag
ctcgaggtcatcttcgaggtgcttgaagagtacgactggacctccttctctgtggtgacc
acgcgtcaccacggctacgaggacttcctggccatggtggagggaatgacggacggctcg
ttcatcggctgggaaaagaagagcgtggtgattcttaacgtgactgatgaccctggcgga
gcccggacgaaacggctgctcaaagacaacgaagcccaggtccgtctgctgtactgctcc
ctggaggaggcggagctggtgtttcgggcagccttggcggcgggtcaggccgggtccagt
cacatgtggtttgccgtgggaccggcgctgtctggtttgggcctggaggggctgcccaag
gccttgttcgccatccggccgcagggctggagggacgagccacgaaggcgcattgccaaa
ggcgtctcggtgctcacccacggggcgatggctctacggagggacctggggaccaacagc
cgctcgcagtacgccggcaactgccagagtgacgccaaccagacccaccgagtgccagac
agaatcaggtacttcagcaacatatccctcggtgggcgggattattccttcaacagtgac
ggctacctgtccaaaccgctgctggatgtcatctcctacaccaatgggaggggctgggag
gaggtcggctggtgggagaacggccacctgcgactgcgttaccacccctggtctcgttac
ggccccttcctgaagcctctggaagactcccagcacctccgagtggttaccttggaggag
aggccctttgtcatcgtggagccggctgacccgggcaccagctcctgcatccgggactct
gtaccctgtcgcatgcccgtcaataccagcttggtggtggacggcaccgggcccacgaag
cactgctgcaaggggttctgcatcgacgtcctcaagcgactggcgaagattgtgggtttc
acctacgacctctacctggtgaccaatgggaggcacgggaagaacatcgatggggagtgg
aacggcatggtcggagaggtggtatccaacagggctgacatggccatcggttctctcacc
attaatgaggagaggtcagaggtcgtggagttctccgttccgttcgtggagaccggcatc
agcgtcatggtttctcgcagcaatggcaccgtgtcgccctctgctttccttgagccctac
agcccggcggtgtgggtgatgatgtttgtgatgtgcctgtcggtggtggctgtcaccgtc
ttcatctttgagttcttcagccccgtgggatacaaccgcagcctgcagagcgccaagaag
tcaggtggatctaagttcaccatagggaagtccgtctggctgctgtgggcgctggtcttc
aacaactctgtgcctgtggagaatcccagaggaaccaccagcaagatcatggtgttggtg
tgggccttcttcgctgtcatcttcctggccnnnnnnnnnnccaacctggctgccttcatg
atccaggaggagtacattgacacggtgtcggggctgtcagataagaagttccagcagccg
gcggagcagtacccgccgctgcgtttcggtacggtaccaaacggcagcacagaggagaac
atccgctccaactatcccaacatgcaccagtacatgatccgcaacaaccagaagggagtg
gaggaggccattgagaacctcaagactggaaaactggatgccttcatttatgacgctgcg
gtgctgaactatatggccagaaaggacgagggctgcaaggtgatgaccatcggctctggt
aaggtgtttgccacgacgggctatggcatcgccttgcacaagaactcccgctggaaacgg
cccctggacctggctctgctgcagctggttggagacgatgagattgatatgttggagcgt
ctctggctgtcgggtatctgccacaatgataagattgaggtgatgagcagtaagctggac
atagacaacatggcaggggtcttctacatgctgctggtggccatgggcctcagcctcctg
gtctttgcctgggagcatctggtgtactggaaactacggcactgtgtgaagcgatctggc
gggatggacttcctcctggctctcagcagggggatgtacagttgctgccagtttgaggat
gagacggcaccgggtggtagtaaaagctccttgccccaataccacaccatgaccaccatg
agcaccatgcctgctggatcccaacacctcgttacagccacagtaaataacacggctgcc
attgccatggtgcaacagcagcaaaagcaccaccaccaacaacaacaacaagggccaacc
tataccaccatgttacctggatcgccaccaactataggacactcagcaatggctctggga
ccctccaacagccccttactggaaggccccatgccttgctccaccttcctgccacgccat
gaccgcagacttgctgttgttgatcgctggaacaggtcaaagccagagaaagtcatgagc
ggaggcagtggtggaggagtgggtgttggggggatagcaggaggaatcactgaacttcag
gtcccacagtatcagccgaaccttggacagcactggagcctgcaagtggcaggtggagca
gggggagggggtgacacaagtctagatgaatataagcgctactatgggcctatagatcca
gaggggctaggagttacctctgaccaacagacagggggtccccagcagactcccaaagct
aatccacgaggccccaaagcctcagggatctcacgaccaccttctaaaggcctccaacaa
ggcccccaacaaggcccagggcacttaatctccaagccacctccactgatgccatgttca
ccacgaaggcctcctttctggcgacggggaagcctcactcaggcaaggaaaaaaagctta
ggaggtcccctgtatgagaatatactccctctggggagacgaggaggtgggaggtatgga
gcaagcgatggaggtggaagaagagggcgacgtcctccacctcctcctctgcctgttccc
ctgtccaccccaacacacactcctaccacaccatcctccccatgccgtttctactcctcc
tgctccagtgcctcatcctcttcctcttcctctacatcaacctcctcctcttcttcgtcc
tctgtctcactgtctcggtcaaattccccattttcttgctccagtgacagctcctacaac
tcctcgttgagtttccggtatcgcgcaggggaccgagactttacggttgatgacgactat
gactccgatctgctcacagaggagtctagcctcctcttagggtcacggaagaagattcgt
tcacgtcgcatgtcatcgcgctcgctgccgtgtagcccgccacctccaccaatcccgccc
aggaagccccgccctcaaaaagattttggcagagagagaacaggcagccagctggcccag
ttacaggagtggtgggcatcatggggagagagagaacgagcgaggggaggaacaacgagt
cggggagatggaacagttagtagactggacaagagacaccacaaagagagggaacgggaa
aggaaaaggaggaagaaggggcgaaagaagaagaagagggaggagagggagagagaaagg
gagcgaaagcggcgcaaagcaaagaagaggaagaaagacgataaggtgaagaagagagag
cggaagaggtcagtgcaggagggaggagatgctgaaaaaagggaggaactgaaatcaggg
atcgcagattacccttcatacccacccctgaggcgagagtcttttcggaaaaagagtgaa
agctcgatccgaagctatggatggaacatctcaggtgaagaggagaggaaggaaagagaa
gagaaagagagggatgatggggaagagagcagagggaaagaaagagaaaccagacgaagg
aacagcaagcactatcatagctcgggcgctaagccttcaacgtctgttaagttctgggga
ggggtcaacccatcctcagtcaccattccatctgcctttctgcccttgttgcctgtctcc
tctaaaaggaggaagagtaaaagttcagacagggatgctgtaggaatggaaggcgagagg
aggccattgctaggacgcgatggaagaggtgagattcactccaaggaggggttgtctttc
cacaagtgggggtctgaagtagagtgtgagggagaagattctgagctggagaggaggaaa
gcaggtcgtggaaagaggcgtggaggaggaaggacaatgtccgatgacgagcgggaacgt
gataaggtagttgggatatattctgatgatgacggttcttcgggagagtttggaaagttc
gagaggtattgggaggatcgtgaaggcagggcagtgggagggattggcgggggtggttgg
tttttcagcacctacccctccagggagaaagctggcagcatcaacagtagagatgatctg
ttcctggagcgaggagagaggtgggggacagccgaaagtggatgggggtctggtggaggt
cgtggaggagagagaggttggggatcgggatcgcagtggcccccgcctcctctcacacca
ccacctcctcgacgatactggtccgtggacaaactccacatgcaggatgagaagaagagt
aaacgcaagtcaaaggaaaagggcagagggcacgctgcttgttcctcctgtcattccccc
cggcaccatccacactcccattcttccaaatgggcccgcgtaacctcgcaaagccaggaa
gagctgtaccagcaaagccagagttttggtgggcccctgaagcccaaacaggaatcctcg
tcgtcctccaaacctgatcgctcacagaatccatccaaatctggcagccagtcaaacctc
agtatccagcagcggacccagagaacagagagggatcgagatcgaggacgacaatcgtct
ccacctccgaacatcataccaaacttgccacccccgcttcctgcccttccagctcctccg
tcctcatctcaccctatccatgttcctccccctacctcttcctcttctgtatcctctccc
tctgtggtctcctccaccccaggggcaccccagccctcctccatggcttcggcaagtgcc
aaactacagtaccagaggttgcgctctgtaccccagccgcagaggttccctcagtctcct
catttacccctcaaagccaagagcctttgctcacgaaggggctcagcccatttctctagt
gtggagagcgaagtctga
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