KEGG   Etheostoma spectabile (orangethroat darter): 116701943
Entry
116701943         CDS       T08457                                 
Symbol
sem1
Name
(RefSeq) 26S proteasome complex subunit SEM1
  KO
K10881  26 proteasome complex subunit DSS1
Organism
esp  Etheostoma spectabile (orangethroat darter)
Pathway
esp03050  Proteasome
esp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:esp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    116701943 (sem1)
  09124 Replication and repair
   03440 Homologous recombination
    116701943 (sem1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:esp03019]
    116701943 (sem1)
   04131 Membrane trafficking [BR:esp04131]
    116701943 (sem1)
   03051 Proteasome [BR:esp03051]
    116701943 (sem1)
   03400 DNA repair and recombination proteins [BR:esp03400]
    116701943 (sem1)
Messenger RNA biogenesis [BR:esp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     116701943 (sem1)
Membrane trafficking [BR:esp04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    116701943 (sem1)
Proteasome [BR:esp03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     116701943 (sem1)
DNA repair and recombination proteins [BR:esp03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     116701943 (sem1)
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 116701943
NCBI-ProteinID: XP_032391882
LinkDB
Position
14:complement(4848049..4850182)
AA seq 70 aa
MSDKKQTVDLGLLEEDDEFEEFPAEDWTGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAEM
EKHGYKMETS
NT seq 213 nt   +upstreamnt  +downstreamnt
atgtcagacaagaaacagacagtggaccttggcttactggaggaggatgatgagtttgaa
gaattcccagctgaagattggacggggctggatgaagatgaagacgctcatgtttgggaa
gacaactgggatgatgacaacgtagaggatgatttctcaaatcaactgagagctgaaatg
gaaaaacatggttacaagatggagacatcttag

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