Etheostoma spectabile (orangethroat darter): 116702093
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Entry
116702093 CDS
T08457
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03022
Basal transcription factors
esp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116702093 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
116702093 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116702093 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
esp03400
]
116702093 (gtf2h4)
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116702093 (gtf2h4)
DNA repair and recombination proteins [BR:
esp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116702093 (gtf2h4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
116702093
NCBI-ProteinID:
XP_032392133
LinkDB
All DBs
Position
14:7437993..7451284
Genome browser
AA seq
463 aa
AA seq
DB search
MKLRVHLQCKNLHEYLRELSPEILDRLYNHPATCLAVYRDLPSLAKNYVMRMLFLDQPLP
QAALALWVKIDSQKDHDECVSVLAGLRLWHSQQLQGGLQGYILNPVFKDNLRIALLGGGK
AWADEGSSLGPDRHARDIESLDRYAIERWEVILHFMVGSPCAAVSQDLAQLLVQAGLMKS
EAGEAPYITSAGFQFLLLDTASQLWYFTLQYLKTAQSRGMELVEILSFLFQLSFSTLGRD
YSVEGMSESLLTFLQHLREFGLVFQRKRKSRRYYPTRLAITLAAGVTTSSSSSSTLASPP
GTGDTGFIVVETNYRIYAYTNSELQIALVALFSEMLYRFPNVVVAQVTRESVQQAIANGI
TAQQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLRFSEGVLYNQFLSQVDFE
VLRDRAQGLGCLVWQDVAQRVMVVSPQGHSEVKRFWKRQKSST
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaagctacgtgtccatctgcagtgtaagaatctgcatgaatacctgcgagagctgagt
cctgaaatattggaccgactgtacaaccacccagcaacatgtctggctgtgtacagggac
ctcccctctctggccaagaactatgtgatgcgtatgctgttcctggaccagcctctcccg
caggcagcactggcattgtgggtgaaaatagacagtcagaaggatcatgacgagtgtgtc
tcggtgttggcaggactccgcctttggcacagtcagcagctgcagggtggtctgcagggc
tacattttaaatccagtgttcaaagacaacctgaggatagctctgctcggcgggggcaaa
gcgtgggcggatgagggcagctcactgggtcccgaccgccacgcgcgggacatcgagagt
ctggaccgctacgccatcgagcgctgggaggtcatcctgcatttcatggtgggttctccc
tgtgctgcggtcagtcaggacctggctcagctgctggtccaagcaggcctcatgaaaagt
gaagcaggagaggcgccctacatcacctcggcgggattccagttcctgctgctggacacg
gcctctcagctgtggtacttcaccctgcagtacctcaaaaccgctcagtccagagggatg
gaactggtggagatcctgtcattcttattccaactcagcttctccactcttggcagagac
tactcggtggagggcatgagtgagtcattactcaccttcctgcagcacctgcgggagttt
gggctggtgttccagaggaagagaaagtcgcggcggtattacccaaccaggctagccatc
actctggctgcaggagtcactaccagctcgtcctcgtcctctactctggcctccccccct
ggtactggagacaccggcttcattgtggtagaaaccaattatcgcatctacgcctacaca
aactcggagcttcagatcgctctggtggctctgttcagtgaaatgctctaccgcttcccc
aatgtagtggttgcccaggtaaccagggagtcggtgcagcaggccatcgccaacggcatc
acagcacagcagattatccacttcctgaggaccagagctcaccctgtcatgctcaaacag
actcccgtgctgcctccgaccatcacagatcagatccgcctgtgggagctagagagagat
cgactgcgcttctcagagggagtgctctacaaccagttcctctcccaggtcgacttcgaa
gtgctgcgagacagagctcagggtctgggctgtctggtgtggcaggacgtggctcagagg
gtgatggtggtgtcgccgcaggggcacagcgaggtcaagaggttctggaaacgacagaag
tccagtacgtaa
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