Etheostoma spectabile (orangethroat darter): 116702211
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Entry
116702211 CDS
T08457
Name
(RefSeq) histone-binding protein RBBP4-like isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03082
ATP-dependent chromatin remodeling
esp03083
Polycomb repressive complex
esp04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116702211
03083 Polycomb repressive complex
116702211
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
116702211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
esp03036
]
116702211
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
116702211
Histone modification proteins
HAT complexes
HATB complex
116702211
HDAC complexes
Sin3A-HDAC complex
116702211
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
116702211
PRC2.2
116702211
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
116702211
Heterochromatin formation proteins
Other heterochromatin formation proteins
116702211
Chromatin remodeling factors
NuRD complex
116702211
NuRF complex
116702211
NuRF complex (fruit fly)
116702211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
eIF2A
MIOS_WD40
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
116702211
NCBI-ProteinID:
XP_032392276
LinkDB
All DBs
Position
14:10795169..10814544
Genome browser
AA seq
425 aa
AA seq
DB search
MADKEAGAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVSRPEGK
DYSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFEASHYDSEKGEFGGFGSVSGKIEIEI
KINHEGEVNRARYMPQNPCIIATKTPTSEVLVFDYTKHPSKPDASGECHPDLRLRGHQKE
GYGLSWNPNLSGSLLSASDDHTICLWDISAVPKEGKIVEAKTIFTGHTAVVEDVSWHLLH
ESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILASGSADKTVA
LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSTD
PEATA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaagaagcaggagcatttgacgatgcggtggaggagagggtgataaatgag
gaatacaagatctggaagaaaaacactccattcctctatgacctggttatgacccatgct
ttagagtggcccagcctcactgctcagtggctgcctgacgtctccaggccagaggggaag
gattacagtgtgcaccggctggtgttgggcacccacacgtctgatgagcaaaatcacctg
gtcattgccagcgttcagctacccaacgatgacgcccagtttgaagcctcacattatgac
agtgaaaaaggagagtttggaggcttcggctcagtaagcggcaagatcgagatagaaatc
aagatcaaccatgaaggagaagtgaaccgggcccgctacatgccccagaacccctgcatc
atcgccaccaagacccccacctcagaagtgctggtgtttgactacaccaagcacccttcc
aagccagatgcctctggagagtgtcaccctgatctgcgtctcagaggccatcagaaagaa
ggctatggtctatcctggaatccaaatctgtccggctctctccttagtgcgtcagatgac
catacaatctgtttgtgggacataagtgctgtgccaaaggaggggaagatagtagaggca
aaaacgattttcactggccacactgctgtggtggaggacgtctcctggcacttgcttcac
gagtctctctttggatccgtagcagatgaccagaagctaatgatttgggacactcgttcg
aacaacacctccaaacccagccatgcagtagacgcccacacagcagaggtcaactgtttg
tcattcaacccttacagcgagttcatccttgcctctggctctgcagacaagactgtggct
ctttgggacttgaggaacttgaaactgaagctgcattctttcgagtcgcacaaggatgag
atcttccaggtccagtggtcccctcataatgagaccatactggcatccagtggaacagac
cgtcgcctcaacgtctgggacctcagtaaaattggagaagagcagtcaccagaagatgca
gaggatggcccccctgagctactgtttatccatggaggccacacagccaagatctcagac
ttctcctggaaccccaacgagccctgggtcatctgctcggtgtctgaagacaacattatg
caagtctggcaaatggctgagaacatctacaatgacgaagatccagagggttcgacagac
cctgaagccacagcgtaa
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