Etheostoma spectabile (orangethroat darter): 116702295
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Entry
116702295 CDS
T08457
Symbol
rnf25
Name
(RefSeq) E3 ubiquitin-protein ligase RNF25 isoform X1
KO
K10640
E3 ubiquitin-protein ligase RNF25 [EC:
2.3.2.27
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116702295 (rnf25)
Enzymes [BR:
esp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116702295 (rnf25)
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116702295 (rnf25)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RWD
zf-RING_2
zf-RING_11
zf-RING_5
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
Trm112p
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
116702295
NCBI-ProteinID:
XP_032392339
LinkDB
All DBs
Position
15:complement(20537978..20543358)
Genome browser
AA seq
493 aa
AA seq
DB search
MFLASRANDCRPGNCFESVFSEIEVLQSIYLDELVVSRKEDGCWEVSLVLYPSTAEDSVS
QFVRLTLTLTLDQQYPSSSPAISIHHPRGLSDDKINSVQKCLQLEAQSCLGSPVLYQLIE
KAKEILTESNIPHGNCVICLYGFKEGETFSKTSCYHYFHSHCLGRYARHSERELHQREKE
LEEDKTRERTDYQELTVVCPVCREPLTYDVDQLLSSPAPQLPELDEAAIGSHFQQKWCEL
QKLLERQRSKGGIIDPEVESNRFFIHTNETPPAAENGNLDADVSPGPPVLSASNVSSYET
GVRAEQFGSGLSHCRGAQGQRRPNQARGPRRGGRSRPQHWRATPITQHLDKLSLSSDCTE
RPINAKAQGSHGQQMQVNAEFCQSKTGRGVHSEQEHTLVSPDQPVCQAALETECLKDAAN
SAGGHGHRGRRRGPHRSAPDTGAPGRYYWDGRASRGRGGPNNLYSRGGVPRRGHGRGFQH
KVVERERAREEVL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgttcttagctagtcgagctaacgattgccggccgggaaactgttttgaaagtgtgttc
tctgaaattgaagtgctgcagtctatctatctggatgaactggtggtcagcaggaaagaa
gacgggtgctgggaggtgagcctcgtcctgtacccgtccacagccgaggactctgtctcc
cagtttgtccgactcactctgactttgaccctcgatcaacagtatccctcgtcttctcca
gccatctccattcatcacccacgggggctttctgatgacaagatcaacagtgtccaaaag
tgtcttcagttggaggctcagtcgtgtctgggttcaccagtgttgtatcagctcattgag
aaagcgaaagaaatcctgactgaaagcaatattcctcatggaaactgtgtcatttgtctc
tatggctttaaggagggagagacgttctccaagacgagctgctaccactacttccactcc
cactgcctcggccgctacgcccgccactctgagagggagctccaccagagggagaaggag
ttggaggaggacaagaccagggagagaacagactatcaggagctgactgtggtgtgtccg
gtgtgtagagagcctctaacatatgatgtggatcagcttctgtcctcccccgccccccag
ctgcccgagctcgacgaagcagcgattggttcacattttcagcagaagtggtgtgaactc
cagaagcttttggaaagacagaggtctaaaggtgggatcattgacccagaggtggagtca
aatcgctttttcatccacaccaacgagactccacctgcggctgaaaacggaaacctggac
gcagacgtctcacctggacccccggtactgtctgcttctaatgtttcctcttacgaaact
ggtgtcagagcagagcagttcggttctggactgtcccactgcagaggcgctcagggccag
aggcgtccgaaccaggcgagggggccgaggagaggaggcagatccagaccacaacactgg
agagcgacccccatcacccagcacctggataagttgtctctgtcctcagactgcactgaa
agaccaataaatgccaaagctcagggtagccatggccaacagatgcaagtaaatgcagag
ttctgccagtctaagacaggcaggggtgtccactcagagcaagaacacaccctggtgtct
ccagaccagccagtgtgccaggcagccttggaaactgaatgtctaaaagatgctgcaaac
tctgcaggtggtcatggtcaccgtggaagaagaaggggtcctcacagatctgccccagac
actggggcccctggacgttattactgggacgggcgggcttcaagaggcaggggagggccc
aataacctgtacagcagaggaggggttccccgtcggggtcacggcaggggcttccaacac
aaggtggtggagcgagagagggctagagaggaggtgctatga
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