Etheostoma spectabile (orangethroat darter): 116702504
Help
Entry
116702504 CDS
T08457
Symbol
tbl3
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116702504 (tbl3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
esp03009
]
116702504 (tbl3)
Ribosome biogenesis [BR:
esp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
116702504 (tbl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Utp13
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_SCAP
NBCH_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_HPS5
Cytochrom_D1
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
116702504
NCBI-ProteinID:
XP_032392628
LinkDB
All DBs
Position
15:complement(7583599..7600070)
Genome browser
AA seq
937 aa
AA seq
DB search
MANTNLQFKTNYVVESKIEPFYKGGKVQISKDENYIFCTCGSRVNVLEISTGKIVHSVEH
DDQEDITSFTLSCDDEMLVTASRALLLKQWDWRQAQCTRSWRAIHTVPVASMTFDSTSTL
LATGGCDGTIKLWDVVKQYCTHNLKGSSGIVHLVQFHPDISRLQLFSSSLDCGIRLWDLR
SSRCVCVLQSHYSAVTSLSFSPDGSTMVSSGRDKICTVWDLKTQKAKRTVPVYEAVEGVV
LLPEDKDLSEIGVKSKDLHFITAGSKGVLRVWEASTARCVYTQTLPSSLTAASEVEEERD
DDPRSLTFLLHLPASSRLATVTAEHNIVLYQLPGLTTQQQFVGYNDEVLDVKFLGKGDSH
IVVATNSSQLKVFELLTNSCQILYGHTDTVLSLDVFKKGFLFASCAKDRSVRVWQMDSDR
GQVHCVAQGSNHANAVGSITCSRMKASFIVSGSQDCTVKVWDLPADLSTTGAGVHQLTPR
ATEKAHDKDVNSVAVSPNDKLLASGSQDRTAKLWSLAGEGNVALLGVFRGHRRGVWAVCF
SPVDQVLATSSADGTTKLWSLQDFSCLKTFEGHDASVLKVIFVSRGTQLLTSGSDGLVKL
WTIKTNECVKTLDAHQDKVWGLHVSRKDDKVVTGSADSNITVWVDVTEVELAEEQAKQED
LILKQQELSNLLHEKKYLKALGLAISLDKPHTVLTVIKAIRQVENSGELLEKTVLKLRVD
QKESLLRYCTVWNTNARNCQDAQAVLHVLLTHLPPEELLQYQGARTHLEGLIPYTERHMQ
RIGNLLQASMFLNYMWQKMRVAGAPSSMDQDEEMDTTPLAKPFFMIDKEKGMVSSDDEKR
DGDDSDGGQDEDPNGPVKEAKVEDDDDDDDNEVSSTKKASASGEQVENGDSTKTNGNHHS
ESEESSAEEASEEEDQTTVKVKFLPVSSTPQGQTFAS
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataccaaccttcaattcaaaacaaattatgttgtcgaaagcaagattgaacct
ttttacaaaggaggaaaagtgcagattagcaaagatgaaaattacatcttttgcacttgt
ggatctcgtgtcaacgttttggagatcagcacagggaagatcgttcacagtgtggagcat
gatgatcaagaggacattacatcttttacactcagctgtgatgatgagatgctggtaaca
gctagtagagctctgctgctaaagcagtgggactggaggcaagctcagtgtactcgctcc
tggagggccattcatactgttcctgtagccagtatgacctttgactctacttctacactc
ctggccacaggtggctgtgatggcactataaagctttgggatgtggtgaagcagtactgc
acccacaaccttaaaggctcatctggcattgtgcacctggtccagttccacccagacatc
agcaggctacagctcttctcctcctctttagactgtggcattcggctgtgggacctgcgc
tccagccggtgtgtgtgtgtgctgcagagccactacagcgctgtcacctcgctcagcttc
agtcccgatggtagcaccatggtcagttctggcagggacaagatctgtacagtgtgggac
ttgaagactcagaaagccaagagaactgtgccagtctacgaggctgtggagggtgttgtg
ctgctgcctgaggataaggacttgtctgagattggagtgaagagcaaagacttgcatttc
atcactgctggaagcaaaggtgtattacgagtatgggaggccagcacggcgcgttgtgtc
tacacccagaccctcccctcttccctcaccgctgcctctgaggtggaggaggagagggac
gacgacccccgcagtcttacgtttctccttcatctgcccgcctcctccagactggccaca
gtcacagcagaacacaacattgtgctctaccagctgcctggtctcaccacacagcagcag
tttgtgggatacaatgatgaagtgctggacgtgaagtttcttggtaaaggggacagccac
attgtggtggccaccaacagcagccaactgaaggtgtttgagctgctcaccaacagctgc
cagatcctctacggacacacagatactgtactctcattggacgtcttcaaaaagggtttt
ctctttgcaagctgtgcgaaggacaggtcagtgcgtgtgtggcagatggacagtgaccgt
ggacaggtgcactgtgtggctcaaggctccaaccatgctaatgctgtgggctccatcacc
tgctccagaatgaaagcatctttcatagtgtccggcagtcaggactgtactgtgaaggtg
tgggatctaccagcagacttatctacgacaggggcgggcgtacatcagctgaccccccgc
gccacagaaaaggcacatgataaggatgtaaacagcgtggcagtctcacccaatgacaaa
ctgctggcttcaggctcccaggaccgcacggccaagctgtggtcactggcgggggagggg
aacgtggccctgctgggggtctttaggggccaccgtcgtggtgtctgggccgtctgcttc
tctcctgttgaccaggtgttggccacgtcctccgcagacggcaccaccaagctgtggagc
ctgcaagacttcagctgtctgaagacctttgagggtcacgatgcatcggttttgaaggtc
atctttgtgagccgaggcactcagctgctcaccagtggctcagatgggttagtaaagctg
tggaccataaagaccaacgagtgtgtaaagacgctggacgcccaccaggacaaagtgtgg
ggtctccatgtcagccgcaaagacgacaaggtggtgactggttcagcagactctaacatc
accgtgtgggtggatgtgactgaagtagagctggcagaggagcaggccaagcaggaggat
ctgatactaaagcagcaggagttgtccaatctgctccatgagaagaaatacctgaaggcc
ctgggtcttgcaatatcactggacaagcctcacactgtgctcactgtgatcaaagcaatc
cgtcaggtggagaatagtggcgagctgttggagaagacggtactaaaactcagagtggat
cagaaagagtcgctcctgcgctactgtactgtgtggaacaccaacgccagaaactgtcag
gatgcccaggccgtcctccacgtgctcctcacacacctgccgcctgaggagctgctgcag
tatcagggtgcccgaacccacctcgagggactcatcccatacacagagagacacatgcag
aggattggcaatctattgcaggcgtctatgtttttaaactacatgtggcagaagatgaga
gtggccggagcaccatccagcatggaccaagacgaagaaatggataccactcctcttgca
aagcctttctttatgattgacaaagagaaaggaatggttagcagcgatgatgagaaacga
gatggagatgacagcgacggcggacaagatgaagatccaaatggcccagttaaagaagca
aaggtggaggacgacgacgatgacgacgacaatgaggtcagttctaccaagaaagcctct
gctagcggcgagcaagtagaaaatggtgatagcaccaaaacaaatggcaaccaccactct
gagagtgaggaaagctcagcagaggaagcatcggaagaagaggatcaaacaacggtaaag
gtgaaatttctcccagtttcttccactccacaaggccagacttttgccagctga
DBGET
integrated database retrieval system
