Etheostoma spectabile (orangethroat darter): 116702549
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Entry
116702549 CDS
T08457
Name
(RefSeq) platelet endothelial cell adhesion molecule-like isoform X1
KO
K06471
platelet/endothelial cell adhesion molecule
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04148
Efferocytosis
esp04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116702549
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116702549
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
esp04090
]
116702549
00536 Glycosaminoglycan binding proteins [BR:
esp00536
]
116702549
04091 Lectins [BR:
esp04091
]
116702549
CD molecules [BR:
esp04090
]
Proteins
116702549
Glycosaminoglycan binding proteins [BR:
esp00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
116702549
Lectins [BR:
esp04091
]
I-type lectins (Siglecs)
116702549
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
I-set
Ig_C17orf99
Zwei_Ig_N
V-set
Big_3_5
DUF6941
Motif
Other DBs
NCBI-GeneID:
116702549
NCBI-ProteinID:
XP_032392706
LinkDB
All DBs
Position
2:4248427..4270374
Genome browser
AA seq
805 aa
AA seq
DB search
MVPLLLLTSTLLSSYFHAGRTVIAEQPFTIRGITLSIEPSADVTRNTNVTLRCKAAVSSS
GKEVLSREYTIYKDGNTIYTKTSSSSEDLLYPLPEVRVSNTGKYKCKISIEGKHVTSGAQ
KLTVTGLSKPVLRLNRGVVSEGEETTATCMARGETGSIFFYFYEDSKEIHEEQVKSNQAE
AKLRITSVGIHKIHCAYTVLVTPDSFKSEESNTVTVSVKELPITPVLEIFPQSKIYEGDK
LVIMCTFSNVLKRSEGIHLYLSQGNQLLSSGETTVNHSMVALAKDPGEFECRFEMGDVVK
FVSKKVSVTELFSVPTFTMSPAEVFQKEYMTLTCKSERFASERLNREELTYALDPSESPL
IPKSAGVFYGKALQYDFNYTCVARARGIVKHSETLTVRPKVSVSIPKISVVGRAVLGQPL
KILCVSDSGSLPINYTLLREYDPLSTTIVKQPFQPAIFTVPITKPDEINTYMCEARNNHR
EAPLSKRLNATVIVPLTQPIMTVIPDLPDISEGVHLYLICGVAGTPPVTFKWYRVGNEQP
LYTTTSNKNNTDYQVPEVSKQHSGTYYCEAVNHANNVVISDRVNIQVHMALWKKVVIGGF
CVLAVSGLVVVFLLCFKSNRGRETYSPPATQAVYLKLCVKTNLPPPTSSCSSSHLSSLIV
GKREAAAELSVKPSSPKSDDSLTVNLTHDTEVYKADSVRANRAAVSVWSERPPGAANDEE
SSVVSNEPDVEYTEVVHPRPVDPARVPLRKGTDTVYSELQNSPHGASDHHDYGSVEYAEL
NSEHPETNHYRPEVNGHQELPAPVD
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggtccccctactactgctcacgtccacgctcctgtccagctacttccatgcagggaga
acggtgatcgcagagcaaccattcacgatacgaggcatcaccctgtccatcgagcccagt
gctgatgtgactcggaacaccaatgtgactctgagatgcaaggccgccgtcagcagctct
gggaaggaggtgctgagtcgtgagtacactatatacaaggacggcaacacaatctacacc
aagacctccagcagctcggaggatcttctgtaccccctgcccgaggtcagagtctccaac
accggcaaatacaagtgcaagatcagcattgaggggaaacacgtgaccagcggagcccag
aaactcacagtaacaggcctgtcgaaaccagttctccgccttaacaggggtgtggtcagc
gaaggggaggagacaacggccacatgtatggcgcgcggtgagacaggctccattttcttt
tacttctacgaggactccaaagagatccacgaggagcaggtcaaatccaaccaggcagag
gccaagctgcgcatcactagtgtcggcattcacaaaattcactgtgcctacactgtcctt
gtaacgccagactccttcaagtcagaggaaagcaacactgtcactgtttcagtcaaagaa
cttcccatcacaccagttttggagattttcccccagtccaaaatttatgaaggagacaaa
ctggtcatcatgtgcaccttcagcaacgttctgaagcgctctgaagggatccacctgtac
ctgagccaggggaaccagcttctcagcagcggagaaaccacagtcaaccacagcatggtg
gcactggccaaggaccctggcgagttcgagtgcagatttgagatgggagatgtagtgaaa
tttgtctcaaagaaggtttcagtgactgagctgttctcagtgcccactttcaccatgtct
cctgctgaagtctttcaaaaggaatacatgacgctaacctgcaaaagtgagcgctttgcc
tctgaaagactcaacagggaagagttgacctacgctcttgatccatctgaaagcccacta
atccccaagagcgctggagtattttatggcaaagccctgcagtatgatttcaactatacc
tgtgtagctcgagccaggggcatcgtgaaacacagtgaaaccctgactgtacgtcctaaa
gtgtccgtctccattccaaagatctcggtggttggcagagcagtcctgggacagcccctc
aagatcctctgtgtgtcagacagtggcagcctgccaataaactacacccttctgagggag
tacgacccactgagcacaaccattgtcaagcagccctttcaaccagctatcttcacagtc
cccatcaccaagcctgacgaaatcaacacgtacatgtgcgaggcgaggaataatcacagg
gaagccccgctcagtaaaagactcaacgcaactgtcatagtacctctgacgcagccgatc
atgaccgtcatccccgacctaccagatatctccgagggagttcatctctacctcatatgt
ggtgttgccggcactccgcccgtcacctttaagtggtaccgtgttggcaacgaacagcca
ctgtataccaccacctccaacaagaacaacacagactaccaggtcccggaggtgtccaaa
cagcacagtggcacgtactactgcgaggcagtcaaccacgccaacaacgtcgtcatcagt
gacagggtcaacatacaggtgcacatggcgttgtggaagaaagtggtgatcggggggttc
tgtgtgctggcggtgtctgggttggtggtggtctttctgctgtgcttcaaatccaacaga
ggtagagagacctacagtcctccagcaactcaggccgtttatctcaaactgtgtgtaaaa
accaaccttcctccacctacttcctcctgctcttcttctcacctctcctctcttattgta
ggtaaaagagaagcagctgctgaattgtcagtaaagccttcgagccctaaatcagatgac
tctttaacagtgaatctaacccacgacacagaggtttataaagcagactcagtgagggca
aaccgagctgcagtcagtgtgtggagcgagcgaccacctggagcagccaatgacgaggag
agcagcgtggtgtccaacgagcctgatgtggagtacactgaggtggtgcatccccggccg
gtagatcctgccagagtcccactgagaaaaggcacagacacagtgtacagtgagctccaa
aactctccacatggtgcttctgaccatcatgactatggttcagtggagtacgctgagctc
aacagtgaacatccggagaccaatcactaccgtccagaagtcaacggccaccaggagctg
ccagcgcccgtggattag
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integrated database retrieval system
