Etheostoma spectabile (orangethroat darter): 116702587
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Entry
116702587 CDS
T08457
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat domain phosphoinositide-interacting protein 1-like
KO
K17908
autophagy-related protein 18
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04136
Autophagy - other
esp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116702587
04136 Autophagy - other
116702587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116702587
03029 Mitochondrial biogenesis [BR:
esp03029
]
116702587
Membrane trafficking [BR:
esp04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
116702587
Mitochondrial biogenesis [BR:
esp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
116702587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_MABP1-WDR62_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_RSE1_2nd
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_HPS5
BCAS3_WD40
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
116702587
NCBI-ProteinID:
XP_032392785
LinkDB
All DBs
Position
15:33891868..33916106
Genome browser
AA seq
466 aa
AA seq
DB search
METGEGAGGPGGPSGPDGPGGPDGPGIQFGCASFNQDSTSLALGTKTSYKLFSLTMVEKL
DCIHESAETPDVYIVERLFSSSLVVVVSTTMPQRMNIYHFKKGTEICNYSYPNNILAVKL
NRQRLVVCLEESIYIHNIKDMKLLKTLLNTPSNPSGLCALSINHSNSYLAYPGSATIGEI
IVYDANNLNTVTMIPAHDSPLAALTFNASATRLASASERGTVIRVFSIPEGLRLFEFRRG
MKRYVNIALYPSGPEASSSCGVRNTETVHIFXLEQQGLSGGDEAATWTAYMGKVFSAASS
YLPAQVSGMMSQDRAFATVHLVTSGQRNVCTLAIIQKLPRVLVATADGQLFIYNVDPLDG
GECILAHKHRLFGFDEDQDEGPESEGSEVTGTAQACPSYAATAALPAAGPVTATLTGYSE
DGGAMKGEVIPEHEFAAGPVCLDDENEFPPINWCRDGTGGGQARRS
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggagaccggagagggtgccggcggacccggcgggcccagcggcccggacggaccgggc
ggaccggacggaccggggatccagttcggctgcgcctccttcaaccaggactccacgtca
ctggctttgggaaccaagaccagctacaagctgttttctctgaccatggtggaaaaactg
gactgcatccatgagagtgcagagactccagatgtctacatcgtggagcgtctgttctcc
agcagtctggtagtcgtggtgagcaccaccatgccgcagcgaatgaacatctaccacttt
aagaaggggacggagatctgtaactacagttatcccaacaacatcctggctgttaagctc
aacagacagaggctcgtggtgtgccttgaagagtccatttatatccacaacatcaaagac
atgaagctcctcaagactctgctcaacactccgtccaacccctcaggtctctgtgctctt
tctatcaaccattccaactcctacctggcgtaccccggcagtgccaccattggggagatc
atagtgtatgatgccaacaatttgaacacagtgaccatgatcccggctcacgacagtcct
ctggcagctctcaccttcaacgcctcggccaccagactcgccagcgcctcagagaggggc
accgtcatccgggtcttctccatccctgagggcctgcgtctgtttgagttccgccggggc
atgaagaggtatgtcaatatagctctttatccttcaggccctgaggccagttcctcttgt
ggcgtccgcaacacagagactgtacacatctttnaactagagcaacagggactaagtgga
ggggacgaggctgccacctggacggcctacatggggaaggtgttctccgcagccagcagc
tacctccctgctcaggtgtctggcatgatgagccaggaccgggcgtttgccaccgtgcac
ctcgtcacatcgggccagaggaacgtctgcaccctggccatcatccaaaagcttccacgg
gtcctggtggccacagctgacggacagctcttcatctacaacgtggatccacttgatgga
ggggagtgcattttagcccacaaacacaggctctttggttttgatgaagaccaggatgag
ggaccagagtcggaagggtcagaggtcacagggacagcgcaggcttgtccgtcctacgct
gcgaccgcggccctaccggccgctggtcccgtcaccgcgaccctcactggctactctgaa
gacggcggggcgatgaaaggcgaagtcattccggaacacgagttcgccgccggccccgtg
tgtctggacgacgagaacgagtttcctcccattaattggtgccgagacgggaccggaggt
ggccaggccaggcgctcgtga
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