Etheostoma spectabile (orangethroat darter): 116702710
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Entry
116702710 CDS
T08457
Name
(RefSeq) THO complex subunit 4-like
KO
K12881
THO complex subunit 4
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03013
Nucleocytoplasmic transport
esp03015
mRNA surveillance pathway
esp03040
Spliceosome
esp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116702710
09122 Translation
03013 Nucleocytoplasmic transport
116702710
03015 mRNA surveillance pathway
116702710
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116702710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116702710
03041 Spliceosome [BR:
esp03041
]
116702710
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116702710
TREX complex
116702710
Spliceosome [BR:
esp03041
]
Complex C
Other components
EJC/TREX
116702710
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
116702710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
FYTT
RRM_3
Motif
Other DBs
NCBI-GeneID:
116702710
NCBI-ProteinID:
XP_032392970
LinkDB
All DBs
Position
2:4331698..4335412
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AA seq
259 aa
AA seq
DB search
MADKMSMSLDDIIKLNKKGGSGRSGGSSRTGGSSGRAGGSSRPMRNRQNNFNRERNNRST
PYTRPRELPDKWQHDMFEEHTGGRRGQSPGAERSVESSSGKLLVSNLDFGVSDSDIKELF
AEFGTLQKASVHYDRSGRSKGTADVHFETKAEALKAMKHYNGVPLDGRPMKIQQVSSDVD
TESRPSTQSSNRGFDRSRLGQAKVERDEWSKGGDRGERRQGGGRGGFRGRGRGGGNRPQL
SAEELDAQLDAYNAKMDTS
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagatgagtatgtctctggacgacattattaagctcaataagaaaggagga
agcggccgctcaggaggatcgtccaggaccggtggaagttcaggccgggccggtggatcg
tcgaggccgatgcggaatcgacagaataacttcaaccgtgagagaaacaacagatccaca
ccgtataccaggcccagagagttaccagacaaatggcagcatgacatgttcgaggagcac
actggtggacgcagaggtcaaagtccaggagcagaaagaagtgtagaaagtagtagtggc
aagctgctggtttccaatctggacttcggtgtctctgactcggatatcaaggagttgttt
gcagagttcgggacattacagaaagcatcagtgcactacgaccggtctggtcgcagtaaa
gggactgcagatgttcactttgagactaaggcggaagctcttaaagccatgaagcattat
aacggtgtccctcttgatggccgtcccatgaaaatccagcaagtgtcttcagatgttgac
acagagagtagaccatctacccagagttcaaacagaggttttgaccgcagcaggcttggg
caggccaaggttgaacgggatgaatggagtaaaggtggcgaccggggagaaaggaggcaa
ggtggcggcaggggaggtttcaggggtcggggaagaggaggtggaaacagaccccaactt
tctgcagaggagctggatgcccagttggatgcttataatgccaaaatggacaccagttag
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integrated database retrieval system
