Etheostoma spectabile (orangethroat darter): 116702783
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Entry
116702783 CDS
T08457
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116702783 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116702783 (vps35)
Membrane trafficking [BR:
esp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
116702783 (vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
116702783
NCBI-ProteinID:
XP_032393110
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All DBs
Position
15:complement(21534041..21586898)
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AA seq
798 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVR
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQPEGTEEMTGDIND
SIDFVLLNFAEMNKLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVDKY
KQIVLSGVLEQVVNCRDSLAQEYLMECIIQVFPDEFHLQTLNPFLRSCAELHQHVNVKNI
IIALIDRLALFAHREDGPGIPSEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLA
IKCYPDRVDYVDKVLESTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLQL
KHFPPLFEYFDYESRKSMSCYVLSNTLDYNTTILEQEQVDAILSLVSTLIQDQPDQPADD
PDPEDFAEEQSLVGRFIHLLHSEDPDQQYLILNTARKHFGAGGNLRIRYTLPPLVFAAYQ
LAFRYKENSSLDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFEN
HETVAYEFMSQAFSLYEDEISDSKAQLSAITLIIGTFERMRCFSEENHEPLRTQCALAAS
KLLKKPDQCRAVSICAHLFWSGRSTEKNGEEIRDGKRVMECLKKALKIANQCMDPSLQVQ
LFIEILNRYICFYERENDAVTVQVLNQLIQKIREDLPNLEASEETEQINKHFHNTLEHLR
LQRESPESEGPAYEGLVL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccacacagcagtctccccaggatgaacaggagaagcttctcgatgaagctgtg
caggctgtcaaggtccagtccttccagatgaaacgatgcctggacaagaataagctgatg
gatgctctgaagcacgcctctaacatgctgggtgagctgaggacctccatgctttctcca
aagagctactacgagctctatatggctatatctgacgaactccactacctagaagtttat
ctgactgatgagtttgccaaaggacgtaaggtggcagatctctatgagctggtccagtat
gcaggcaacatcattcccagactctatctgctaatcacagtgggtgtggtgtacgttcgc
tccttcccccagtctcgtaaagacattcttaaggacctggttgagatgtgtcgtggtgtc
cagcacccactcaggggcctcttcctcagaaactacctgttgcagtgtacccgcaacata
ctgccagatgatggagagcagccagagggaacagaggagatgaccggcgacatcaatgac
tccatcgactttgtccttctgaactttgccgaaatgaacaagttatgggttcgaatgcag
catcagggtcacagccgagaccgggagaagagagaaaaggaacgacaagagctcaggatt
ctggtgggcaccaacctagttcgcctcagccagctggagggtgtcaacgtagacaagtac
aaacagattgtactttcaggagtgctggagcaggttgtgaactgcagagactcgttggct
caggagtatctaatggagtgcatcattcaggtttttccagatgagttccaccttcagacc
ctgaaccctttcctacgttcctgtgctgagctccatcaacatgtcaatgtcaagaacatc
atcattgctctcattgacagacttgctctgtttgctcatcgagaagatggccctggcatt
ccatctgagatcaaactgtttgacatcttctctcaacaagtggccactgttattcaatct
cgccaggacatgccatcagaggacgtggtctctttgcaggtctctctcatcaacttggcc
attaaatgctaccctgaccgtgtggactatgtagataaggtcctggagagcactgtggag
atattcaacaagctcaacttggaacacatagcgaccagcagcgccgtgtcaaaggaacta
accagactgttgaagatcccagtggatacctacaacaacatcctgactgtgctgcaactc
aagcacttcccaccactctttgagtactttgactacgagtcacgcaagagcatgagttgc
tatgtgctgagcaacacactggactacaacaccaccattctggaacaggaacaggtggac
gccatcttgagcttggtgtccacactgatacaggaccagccagaccaaccagctgatgac
cctgaccctgaggactttgctgaggagcagagccttgtgggtcgtttcatccatctgctc
cattccgaagatccggatcaacagtatcttattctgaacacagcccgaaaacactttggt
gctggtgggaacctaaggattcgctacacacttcctcctctggtgtttgctgcctaccag
ctggccttcagatacaaggagaactcctcattggatgacaagtgggaaaagaagtgtcag
aagatcttttccttcgcccaccagaccattagtgcacttatcaaggcggagcttgccgag
ctgcctcttcgactcttcctccagggtgcgctagctgcaggggagattggttttgagaac
cacgagactgttgcttatgagttcatgtcacaggccttctctctgtacgaagatgagatt
agtgactctaaagcccagttgtcagccatcacactgatcattggtacctttgagcgaatg
cgatgtttcagcgaggaaaaccatgagccgctgaggactcagtgtgcactggctgcctcc
aaactgctgaagaagcctgaccagtgccgagccgtcagtatctgcgcccatctcttttgg
tcaggtcgcagcactgaaaaaaatggtgaagagatccgcgatggtaagcgggtgatggag
tgtctaaagaaagccctgaagattgccaaccagtgtatggacccatcgctgcaagtccag
cttttcattgaaatcctcaacagatacatctgcttctatgagagagaaaacgatgcggtg
actgtccaggtattaaaccagctcattcagaagatcagagaagaccttcccaacctggag
gcgagtgaggaaactgagcagatcaacaaacacttccacaacacactggagcatcttcgc
ctgcagagggagtcccccgagtctgagggccccgcctatgagggcctggtcctttaa
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