Etheostoma spectabile (orangethroat darter): 116702833
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Entry
116702833 CDS
T08457
Name
(RefSeq) ATP-dependent RNA helicase DDX39A-like
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
esp03041
]
116702833
Enzymes [BR:
esp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116702833
Spliceosome [BR:
esp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
116702833
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
116702833
NCBI-ProteinID:
XP_032393209
LinkDB
All DBs
Position
15:24186399..24196879
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AA seq
427 aa
AA seq
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MAENDVDSELLDYEEDEEPQGAPESAVPAGKKEVKGSYVSIHSSGFRDFLLKPELLRAII
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMSSVKAAVFFGGMVIRKDEEVLKKNCPHIVVGTPGRILALIR
NKTLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFKITPHEKQVMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCI
ALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKTLNDVQDRFEVNVAELPDEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaatgatgttgatagcgagctgctcgactacgaagaagatgaagagccccaa
ggagcgcccgagagcgcggtccccgccggcaagaaggaggtcaagggttcctacgtgtcc
atccacagctccggcttcagagactttctgctcaaaccggagctgctccgggcaatcatc
gactgcgggtttgagcatccgtctgaagtccagcatgagtgcatcccacaagccatcctg
ggcatggacatcctgtgccaagccaagtctggtatggggaagacggctgtgtttgtgctg
gccacgctgcagcagattgaacctgtcgatggacaggtgtccgtgttggtcatgtgccac
acgcgagagctggccttccagatcagcaaagagtacgagcgtttctcaaagtacatgtcc
tcggtgaaggcggccgtgttcttcgggggcatggtcatcaggaaggacgaggaggtcctg
aagaagaactgtccccacatcgtggtggggacgcccggccgcatcctcgctctcatccgc
aacaagacgctcaatctgaagaacgtcaagcactttgtcctggatgagtgtgacaaaatg
ttggaacagctagacatgcggcgtgacgtgcaggagatcttcaagatcacgccccatgag
aagcaggtcatgatgttcagcgccacgctgagcaaagagatccgaccggtctgccgcaag
ttcatgcaggaccccatggaagtgtttgtggacgacgagaccaagctgacgctccacggc
ctgcagcagtactactgcaagctgaaggacagcgagaagaaccgcaagctctttgacctg
ctcgacgtgttggagttcaaccaggtggtgatctttgtcaagtccgtgcagcgctgcatc
gctctggcccagcttctggtggaacaaaacttccctgccatcgccatccacaggggaatg
gctcaggaggagaggctgtctcgctatcagcagtttaaggacttccagaggcggatcctg
gtggccactaacctctttggccgaggaatggacattgagcgcgtcaatatcgtcttcaac
tacgacatgccagaagattctgacacctatttgcacagggtcgcccgtgctggcaggttt
ggaaccaaaggcctggccatcaccttcgtgtcggacgagacggacgccaagacgctgaac
gacgttcaggaccggtttgaagtgaacgtggcggagctgccggacgagatcgacatctcc
tcttacatcgagcagtccagatga
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