Etheostoma spectabile (orangethroat darter): 116702871
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Entry
116702871 CDS
T08457
Symbol
shank1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
esp
Etheostoma spectabile (orangethroat darter)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
SH3_2
Ank_5
SAM_2
PDZ_6
PDZ
SH3_9
FERM_f0
SH3_1
Motif
Other DBs
NCBI-GeneID:
116702871
NCBI-ProteinID:
XP_032393271
LinkDB
All DBs
Position
15:16838652..16921533
Genome browser
AA seq
2455 aa
AA seq
DB search
MTMPFSPLSSDEEQQRMLGNNRHLYPGAEDEEEEEEEEEEEMEEEERDEDQEEEENGELE
GEEEDDEEEMVEEVRRGGLSRGSRGEGHRQSGKLAGRPTRDRQVRPGNPGHATNPYSSNP
GPTHQQPANHIQQQQQRRLKERSTGTVPSEDTHIAMMVFRIGIPDIKQTKCLRFNPDATV
WKAKQQVLCSLTESLRDVLNYGLFQPATDGHDAKFLEEERLLKEYPQSFEKGVPYLEFRY
KTRVYKQTNLDEKQLAKLHTKASLKKFMDYIQTSAVDKMVKFLDKGLDPNFQDPDTGETA
LSLAVQCEPGAGETIRVLVEGGAHIDFRAKDGLTPLHKAVRGHRHTALLVLLSLGASPDY
KDRRGLTPLYHTVLTGGDTSCCETLLFHRAKLGIRDENGWDETHQACQHGNSQHLEHLLF
YGADSSSQNASGNTALHICALYNKESCSRILLYRGANKDTKNSSGQTPFQVAVMSGHFEL
GEIIKNHRDTDVVPFVESPKYAPQRRESTRTLTIPNPHPFLRANSDSSMNLPDWMAVPNA
PGTNIVSVQGYKHTGTLRSSSSPRGARTRSPSRGRIGDKEDRSRQSRRQGPVPASAAGQT
AGQRRRLYSAVPGRVFVATRSNSAQGEREISFSKGDRVKVLSVGEGGYWEGTVRGRTGWF
PSDCVEEVMLRSQDNRSESRGERAKRLFRHYTVGSYDSFDAPSDYIIKEKTVLLQKKDSE
GFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVK
VGHRQVVNMIRQGGNSLMVKVVMVTRNPDMEEGSRKKIPQQSKRLSTPAIALRSKSMTSE
LEEMVERAATPWKKKSEFESSQVTEKKRTVYQMALNKLDEILAAAQQTISTNEAPGTRGQ
GPKRDRGRSFYGNEPNYGDHSGMGMMSSGLGLGYDRGQYTSGHGPPHGMLRQKSIGVPEE
ERQYLHPPAMKFARSLSVPGPDEIPPPPTTAPPDPPFSSAPPLGWRAKSSQQPSVSVSQS
TSTSAHYQPYSQSVHFTHGGRERAGGPSTGPSDGAVDNTTAYAHAAAHTAQSRTASRKVA
YTGESVGGGIGASGGAKGAGLRRGYSTAVPPSSIATVMPQQQQSTQSQPQRADRSAAGAG
AGGPKGGARRGKGPLVKQSKVEDLRMAQGTLGGKGSVEKSSIPIPTIIVKAPSTSSSGRS
SQGSSVEADAPASGETDEAKTPHGPPPSTPAPQPPSPPSIPAPPPPSLPSMRAQDNLDFT
SQFGAAIVGAARRDRERFHEARRKSASLFMSVEEDVSLGGVSDGITRTQVSQQQLNTQGE
SSSTRLRPSKSIDEGMFSGDTFIHHTRSMPPAFGLPEYSTPALDYQPKSVPTDLYTAAGR
QPAPSSTTTFIHPLTGKALDPTSPLGLALAARERALRDDSRLRRGTEHHFTRQMSSGMFP
SSTVTSQPVSSTAQSSSSSYLVTSSSLAATTATVGRPPSPRILRGVGSVWSEESGGGERE
REGGGAREGLRVRFSEDKTVHTHHYQSQPYQPTYKERERDRSRDRERELSRERERDKERE
GYMRRAEQAAANAAAAESSAQQASHSQQPRRPTFLRMESQTDAYILSLTPPSPPPTSTQQ
TANTTGSTGTAIMVLPPPAPSVDVDDEFVYADPLPPPLQFANSFDRGLSGYSQHGMRPNS
LTSRQQQVPPPPPPPPPPPPPPPPPQKESFVSGFPAHTPLPSPQAGDSTASSLTSYDSEV
ANLTQSATSPSQTSPNPPPPHSPSTLQPTSIAGPPPPPSVSPPPPPGSYHRPFSMSHPHH
LYNSSHTPGRSSPTPPPHTVAPPPAYRSHPAPSSTAATSAPLRGNASHATTASCAATTTS
AATTTNTSTQLYHERTHTTHTSSTAITGSRRTGEHHRPPPATKKGESQETVVDSGIEELD
SRSSSDHHLDSILASVRGDRLDRGERGGRMGGGTGESERGGDFLESYMSYLDGQTFEMQN
ATAAASTYPKTNRFREGGRTSDLHRQTSTAPASFHSHRRRDEQEEDEVEEGVDESGRDGY
GVRDMQNLGRPISPYFDRPRTPEMKPLWGEGQMAGDQSGSLLEGKKIYPPASSMKPSIIN
ELSSKLQQRTKDSWSSQRPLGRHRSRNRFSEDSASALSPPSGRSLSPSPISLSQPSLSPS
PTPASQYPNWGRSPSPQPQPPAACQPPRSHSPLSPTSYAPYPTSPKHRPVYRTKALEFQF
IPSRDSRKAESHMFQRRRAPSPLISPSERPKLGPPRPSSLPLLPTTPLYSAMYDLRGSIT
PPSPGNPLGDPYFSPSPPLFAPSGAPPPPNSTLVVSRSLSPTHFLSGTSSPPLHPHPPPT
CLSYPHLPPPSPTKPFASKPLPYWTKYDVADWLGYLNLGEHRERFLDNEIDGTHLPSLTK
DDYLDLGVTRVGHRMNIERALRTVMDRMSSSPFPISVLSPRDGQNERRRDDGSRS
NT seq
7368 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgccattcagtcccctgtccagcgacgaggagcaacaaaggatgctgggaaac
aatcgacatctctatccaggggcagaggacgaggaagaggaggaagaagaggaagaggaa
gaaatggaagaagaagagcgtgatgaggaccaggaggaggaggagaatggcgagctggag
ggggaagaggaagacgatgaggaagagatggtggaggaggtcaggcgaggaggcctatca
cggggcagcaggggtgagggacacaggcagtcagggaaattggccggaagacccaccagg
gacagacaggtccggccagggaaccctggacacgccacaaacccctattcgtccaatcct
ggacccacgcaccaacagccagccaatcacatacagcagcagcagcagcggaggctgaag
gagcgcagcacaggcactgtgccttctgaggacacccacattgccatgatggtctttcgc
atcggtatcccagacataaagcaaacgaaatgtttgcggtttaacccagatgccactgtg
tggaaggccaagcagcaggtgctctgctccctgaccgaatctctccgggacgtcctgaac
tacggtctgttccaacccgccacggacggccatgatgccaagttcctggaggaggagagg
ctgctcaaagagtacccacagtcctttgagaaaggggtaccatatttagagtttcgatac
aagaccagggtatacaaacagaccaatctggatgagaagcaactggccaaactgcacact
aaggctagcctgaagaaattcatggattatatccaaaccagcgctgtggacaagatggtc
aagttcttagacaaaggcctcgatcccaactttcaggaccctgacaccggcgagactgct
ctgtccctggcggtgcagtgtgagccaggtgcaggcgagaccatccgggtcctggtggag
ggaggggctcacattgacttccgcgccaaagatggactcacacctttacacaaagctgtg
cgaggccaccgccatacagccctgctggtcctgctgtctctgggtgcgtctccggactat
aaggaccggcgagggctgacgccgctctatcacactgtgctgacagggggggacacctcc
tgctgcgaaacactgcttttccaccgcgccaaactgggcatcagggacgagaacggctgg
gacgagacacatcaggcctgtcagcatggtaactcgcagcatctggagcacctccttttc
tacggagcagattcttcctcccagaatgcctctggaaacactgccttgcacatctgtgct
ttatacaacaaggaaagctgttcacgaattctgctctaccggggagcaaataaagacaca
aagaacagcagtgggcaaaccccctttcaggtggctgttatgtccggccattttgagctg
ggagaaattatcaaaaaccaccgggatacagatgtggttccctttgtggagtctccaaag
tacgcccctcagaggcgggagagcacccggacactgacgatacccaaccctcatcccttc
ctccgggccaacagtgacagcagcatgaacctgccagactggatggcggtgcctaacgcc
ccagggaccaatattgtctctgtgcagggctacaaacatacaggaaccctgcgcagctcc
agcagtcccagaggggcgaggacgcgttccccttcccggggaaggatcggagacaaggag
gacaggagcaggcagagtcggagacaagggcccgtccctgccagtgcagctggacaaacc
gcaggccagcggagacgcctctacagcgctgtcccgggacgagtctttgtagctactcga
tcaaactctgcccaaggcgagcgggaaatcagcttcagtaaaggagacagggtcaaagtg
ttgagtgttggcgagggcgggtactgggaggggacggtcagaggtcgcacaggctggttc
ccctctgactgtgtggaggaagtaatgcttcgaagccaagacaaccgatcagagagccgg
ggagaacgagccaaaaggctgttccgccattacactgtgggatcctatgacagctttgac
gctcccagtgactatataatcaaggagaagacagtgcttctgcagaaaaaagacagtgag
ggtttcggctttgtgttgagaggagcaaaagctcagactcctatcgaggagttcaccccc
accccggctttccctgccctgcagtacctggagtcagtggacgagggaggcgtcgcctgg
agagccggcctcaggatgggggatttcctgatagaggtcaatggtcaaaatgtggtgaag
gttggtcaccgacaggtcgtcaacatgatccgccaaggtggcaacagcctcatggtcaag
gttgtcatggtaacccgcaaccccgacatggaggagggttcgaggaagaaaatcccccag
cagagcaagaggctgagcactccggctatcgccctgcgttccaaatccatgacttcagaa
ttggaggagatggtggagagagctgctaccccttggaaaaaaaaatcagaattcgaatcc
tcacaagttacagagaagaagaggacagtctatcagatggctttgaataaactagatgaa
attcttgcagcagctcagcagacaatcagcaccaacgaggcgccggggacacggggacag
gggccaaaaagagacagggggcgaagtttctatggcaatgagccaaactacggggatcat
tccgggatggggatgatgtcgtctgggttgggcctcggctacgaccgtggccagtacacc
tcaggtcacggccctccgcacggtatgctgcggcagaaatccatcggggtgcccgaggag
gagagacagtacctgcatcctccagccatgaagtttgctcgcagtctgtcggtgcctggc
ccagacgaaatccctcctcctcccaccacagctccaccagacccaccattctcctctgct
ccgccactaggttggagagcgaagtcatcccagcagccctctgtctccgtttcacagtcc
acatccacctctgcgcactaccagccctactcccagtcagtgcacttcacacatgggggc
agggaaagggccggtggtcccagcactggtcccagtgatggagcagtggacaacacaacc
gcgtatgcacacgccgctgcccacactgctcaaagcaggactgcttcacggaaggttgcg
tatactggggagtctgttggaggtggcataggtgctagtggaggggccaagggtgcaggt
cttaggagaggctacagcaccgctgtccccccatccagcattgctactgtaatgccccag
caacaacagtctacccagagtcaaccccagcgagcagaccgcagtgcagctggggctgga
gcaggtggtcctaaaggaggggcccggagaggcaagggccccctggtgaagcaatccaag
gtagaagacctgcgcatggcccagggtacactgggaggaaaaggctcggtggagaaaagc
tccatccccataccaaccattatcgtcaaggccccttcaaccagcagcagtggacgcagc
agccagggcagcagtgtggaggccgacgctcctgcatcaggggagacagatgaagcaaaa
acgcctcatggtcctcctccctccactcctgctccacagcccccttctccgccttccatc
ccagcgccgccgcctccgtccttgccttctatgcgagcccaggataatctggacttcacc
agccagtttggggctgccattgttggcgcagctcgccgagacagggaacggtttcatgaa
gcccgcagaaagagtgcctcattgttcatgtctgttgaggaggatgtaagtcttggggga
gtgagtgatggaataacaaggactcaagtgtcacagcaacagcttaacacacagggtgaa
agttcatcaacacggctgcgcccgtccaagtctattgacgagggcatgttctctggggat
acctttatccatcacacccgcagtatgcctccagcctttggcctacctgagtactccaca
cctgccctggactatcagcctaagtctgtgcccactgacttgtacacagcagcaggcagg
cagccagcaccctccagtaccaccacattcattcaccctctaacaggaaaggctcttgac
cccacgtcgccactaggcctcgccctggctgccagagagcgtgctctaagggatgacagc
cgattaaggaggggaaccgagcaccactttacccgacagatgtcgagtgggatgtttcct
tcgtctactgtgacttctcagcctgtgtcgtcgaccgcccagtcctccagctcttcatac
ctggtcacctcatcttctctggccgctaccacagccactgttggacgcccaccctcaccc
agaatcctcagaggagttgggagtgtgtggagtgaggaaagtggtggaggagagagggag
cgggaaggaggaggggctcgtgaggggctaagagttcgcttctctgaggacaaaacggtc
cacacacaccattaccagtctcagccgtatcagccaacctacaaggagagggagcgagac
aggtcgagggatcgggagagggagctgtcaagagaaagagagagggacaaagagagagag
ggttacatgaggagggcagaacaggctgctgccaatgcggcagccgctgagagctctgct
cagcaggcgtcccattctcagcagcctcggaggcccacttttctcaggatggaaagtcaa
actgatgcctatatcttgtccctcacccctccctctcctccacctaccagtactcagcag
acagcaaacactactgggagcactgggactgctataatggttcttcctcccccggccccc
tcagttgatgtggatgatgagtttgtctacgcagaccctctcccccctccgttacagttt
gctaacagcttcgacaggggactatcagggtactcacaacacgggatgcgccccaacagc
ctgacatcccgccaacagcaggtcccacccccgccacctccacctcctcctccaccacca
ccccctccacccccccaaaaagaatcatttgtaagtgggtttcctgctcatacacccctg
ccctcacctcaggcaggggactccactgcctcgagcctcacatcttacgacagtgaggta
gctaacctgactcagtccgctacgtccccctcccaaacgtcgcccaacccccctccccct
cactctccctccactctgcagcccacctcgatagcgggacctccgcctcccccatcagtc
tcaccaccgccccctcccggatcttatcacagacccttctctatgtcccacccccaccac
ctctacaacagctctcacactcccgggcgctcctcccccacgccccccccgcacacagtt
gcgcctcccccggcctatcgtagtcacccagcgccctcctccactgctgccacctctgct
ccacttaggggcaatgcctcacacgccacgaccgctagctgtgccgctacaaccacttct
gctgccaccacaacaaacacctccactcagctctaccacgagcgcacacataccacacat
acatcatccaccgccatcactggcagtcgcaggacaggggagcaccatcgtcctcccccc
gctactaagaaaggagagtcccaagagacggtagtggactctgggattgaggaactggac
agccgcagcagcagtgaccaccacctcgacagcatcctggccagtgtccgtggagacagg
ctggaccgaggggagagaggaggacggatgggaggcgggacaggggaatcagaaagggga
ggagattttctggagtcttacatgagctacctggacggacaaacttttgagatgcagaat
gccacagcagcagcctccacctatccaaaaaccaacaggttcagagagggaggtcgcacc
agtgatctacacagacagaccagcactgctcctgcatccttccactcacacagacgaaga
gatgagcaggaagaggatgaggtcgaggaaggagtggatgaaagtggccgggacgggtat
ggagtaagggacatgcaaaatttgggacgccctatttcaccgtactttgatcgccctcgc
actcctgagatgaagcctctatggggcgaggggcagatggccggtgaccagtctgggtca
cttttagaggggaaaaagatttaccctcctgcatccagtatgaagcccagcatcataaat
gagctgagcagcaaactgcagcaaagaaccaaggacagctggagcagccagagaccacta
ggcagacacagaagcagaaacagattctcagaagactcagcctcagctttgagccccccc
tcaggtcgatccttgtcaccgtctccgatttcattatcgcaaccatcgttgtccccgtcc
ccaacccctgcctctcagtaccccaactggggacgatccccatctcctcaacctcaacct
ccagctgcctgtcagcctccacgttcacattccccattgtctccgacatcttatgcccca
taccccacttcccccaaacacagacctgtctaccggaccaaagccctagaattccagttc
atccccagtcgcgactcccgtaaagcagaatcacacatgttccagcgtaggcgagcaccc
agccccctcatctccccgtcagagaggccaaagctgggtcccccccggccatcatccctt
ccgctcctccccaccacacctctgtacagtgccatgtatgacctccgaggttcaatcacc
ccgccatcacctgggaaccctcttggagatccttacttctcgccctctcctcccctgttt
gccccctctggtgcccctcctcctccaaactctactttagttgtctctcgatccctctct
ccaactcacttcctgtccgggacctcttctccgcccctgcaccctcatcctccgcctaca
tgcctgagttatccccatcttccgcccccttcccctacaaagccttttgcctccaagccg
ctgccctactggaccaagtatgacgttgcagactggctaggatacctgaacttgggtgag
cacagagagcgtttcctggataacgagattgacggcacccacttgccctccttaactaag
gacgactatctggatttgggtgtgacacgtgtaggccaccgcatgaacatagaacgggcc
ctgaggaccgttatggacaggatgtccagcagtccattccccatctctgttctctcacct
cgggatggacagaatgagaggaggagggacgacgggagtcggagctga
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integrated database retrieval system
