Etheostoma spectabile (orangethroat darter): 116702885
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Entry
116702885 CDS
T08457
Symbol
tmc3
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
esp02000
]
116702885 (tmc3)
03037 Cilium and associated proteins [BR:
esp03037
]
116702885 (tmc3)
Transporters [BR:
esp02000
]
Other transporters
Pores ion channels [TC:
1
]
116702885 (tmc3)
Cilium and associated proteins [BR:
esp03037
]
Other cilia and associated proteins
Stereociliary proteins
116702885 (tmc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Orf78
Motif
Other DBs
NCBI-GeneID:
116702885
NCBI-ProteinID:
XP_032393297
LinkDB
All DBs
Position
15:complement(26344077..26385870)
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AA seq
1173 aa
AA seq
DB search
MSTVSESLVGSSRSLSAAKRHKSIRKNSRRIYSAYQEQGSSDDDDKEDERVDSNDPEEMF
QNIQYQKEIIANIRTRPWPMRRKLKVLKQAREIVLRYEGRLTRTRGYQTAGADLLKKLSR
VLYNIVVLFIPWEVRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFIVLPELLAG
APFGTTRSKTIPKEHLASAQDLDTIWSLGGYLQYSVLFYGYYGRLRKIGSAGYRLPLAYF
LVGMAVFAYSFIILLRKMAKNSRLSLASASDENFTFCWRVFCAWDYLIGNPEAAESKGAA
IVNNIREAIVEEQEKKKDTSLAVLISLRILANILVLLSLAGSIYIIYFVVDRSQKLEQEK
PELTLWEKNEVSVVVSLITMIAPSAFELVSQLEMYHPRTSLRFQLARVLVLYLGNLYSLI
IALLDKVNSMSSAVPVSPGNWSDSTSFLATISQPEVDSLSTLVSDISVSEHRNSTIATIA
TVLDVRNSSVSSSGGVSNQTALFEKNTRSQQDPCWETYVGQEMLKLSIIDMIFTVASILL
IDFIRGLVVRYLSDCCCWDLESKFPEYGEFKIAENVLHLIYNQGMIWMGAFFSPCLPAFN
VLKLIGLMYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIVRYRPS
QHCGPFSGQEKIYDIISETVANDFPLWFSKVMSYVTSPVVVLPALLLLFMLIYYLQAIAR
SLKFTNNQLRMQLQTERTEDKKKVFQLAAARLQAPEAVADKKPDEQESDITSQEASIHTP
SPRHNGSITNFHSPVRRGNSIRTITQSASRADLNRGRGAGSVRSPTVTILPKHRPEHVPN
RPPSFFGGPSGTCRSKSYHHMAYNPPARYSDKIHSDPLYRKTTRSIHPVEAAGIITAQSY
GGRRGPTTRYVIVNEHDPRKKLLRSATRIPRHYLMEEPAEILELYPRNFKRYPPRTAHRQ
PQPHQPQTSQPHLSEEEEEEDKGKGRKRMSLGKTHRPRSLSDLQQPAHFYIGNRGESHSS
MAKDSHTARGRCGAQEEDEEGEDVEMDWGGLESHSQSQASLRGADCLLMRSRRHIHSPGR
HCQSPAQTRHMEAYVKPKMRPKLETPLTESDSASLASSSDQQNSSTDQYIQVIHNKEHYL
KSDARQGKLAKKKSKTSFDQIATESNDLVFSNV
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagtgtctgagtctttggttggcagcagcagatctctgtctgcagccaagaga
cacaaaagtatcaggaagaactccagaaggatttattcagcctaccaggagcagggctcc
tccgatgatgacgataaagaggatgagcgggtggacagcaacgacccagaggagatgttc
cagaacattcagtaccagaaggagattatcgccaacattcggaccagaccctggcccatg
agacgcaagctcaaagtcttaaagcaggccagagagattgttctgaggtatgagggccga
ctcaccagaaccagaggttaccagaccgcaggagctgatctgctgaagaaactttcacgc
gtgctttacaacatcgtggttctgttcattccctgggaagtgaggatcaagaaaattgaa
agtcactttgggtcgggcgtggcctcctactttatcttcctgcgctggttgttcgggatc
aacatcgtcctcaccatcatgactggagccttcatcgtcctaccagagctgctggctgga
gctccgtttggaacgacgaggagtaaaactatccccaaggagcatctggcttcagcccag
gacctggacaccatctggtctcttgggggatacctgcagtactctgtcttattctatggc
tactatggcaggctgaggaagatcggcagcgcagggtaccggttgcccctcgcctacttc
ctggttgggatggctgtgtttgcctacagtttcatcattctgttaagaaaaatggcaaag
aactctcgcctgagcctggccagtgcctcggatgagaacttcacgttctgctggagagtt
ttctgtgcctgggattacctgataggaaacccggaggctgcagagagcaaaggagccgcc
atcgtcaacaacatcagggaagccattgttgaggagcaggaaaagaagaaggataccagt
ctggcagttctgatcagtctgcgtatcttagccaacatcctggtgctgctgtctctggcc
ggcagcatctacatcatctactttgtggtggaccgctcacagaaactggagcaggagaag
cccgagctgacgctgtgggagaagaacgaggtgagtgtggtggtttctctcatcaccatg
atcgctccgtctgcctttgagctggtgtctcagctggagatgtaccacccacggacctcg
ctgcgcttccagctggccagagtacttgttttataccttgggaatctctacagcctcatt
attgccctcctcgataaggtcaacagtatgagctctgctgtcccagtgagtccaggtaac
tggtctgactccacctccttcctggccaccatctctcagccggaggtagacagcctctcc
acgctggtttctgacatctccgtctccgagcatcgcaacagcaccatagcgaccattgcc
acggtgctggacgttaggaacagcagcgtgagcagctcagggggcgtctccaaccagaca
gctctgtttgagaagaacacccgctctcaacaggacccctgctgggagacctacgttgga
caggagatgctgaagctgtctatcattgacatgatcttcacggtggccagcatcctgctc
attgacttcatcagagggttggtggttcgctacctgagtgactgctgctgctgggattta
gagagcaagtttcctgaatatggagaattcaaaatagcagagaatgttttacatctgatt
tataaccaagggatgatctggatgggagcgtttttctctccctgtctccctgccttcaac
gtgttgaagctgattggtctgatgtatctgaggagctgggccgtcctcacctgcaacgtc
ccccatcagcaggtgttccgagcctccagatcaaacaatttctacctggctatgctgctt
ttcatgctctttctgtgtatgctgcccaccatattcgccatagtgagatacagaccgtca
cagcattgtggaccattcagtggtcaagagaagatatatgacatcatctctgaaacagtg
gccaatgacttccccctgtggttcagtaaagtgatgagctacgtcactagtcctgtggta
gtgctgcctgcactgctgctgctgttcatgctgatatactatctccaggccatagccaga
tccctcaaattcaccaacaaccagctgagaatgcagctccagactgagcggaccgaggac
aagaagaaagtcttccagctggctgcagcgaggctgcaggctccagaggctgtggcggac
aaaaagccggatgagcaggagagcgacatcacgagccaggaggcctccattcacactcca
tctccccgacacaacggcagcatcacaaacttccactcccctgttcgtcgtggaaacagc
atccgcaccatcacccaatcagcgtccagggcggacctgaacagaggaaggggggctgga
tctgtcagaagtccaacagtgaccatactacccaaacacaggccggagcacgttccaaac
aggcccccgtccttcttcggtggccctagtgggacctgcaggtctaagtcctaccaccac
atggcgtacaatcccccagctcgctattctgacaagatccactctgaccccctgtacagg
aagaccacacgctccatacatccggtcgaggctgccgggatcatcactgcgcagagttat
ggaggacgccgcggccccaccacccgctatgtgatcgtcaacgagcatgacccccggaag
aagctgctgcgctcagccacacggatcccgcgccattacctcatggaggagcccgcagag
atactggagctgtacccgcgcaacttcaaacgctacccgccgcgcactgctcaccgccaa
ccgcaacctcaccagccccagacctcgcagccccatctgagcgaagaggaagaggaggag
gataagggaaaaggcaggaaaaggatgtcactggggaagactcatcggccccgttccctc
tctgacctccagcagccagcgcacttctacatcggaaaccgcggggagagccactcatca
atggctaaagacagccacactgctcgaggaagatgtggagcgcaggaagaggatgaagag
ggggaggatgtcgaaatggactggggcggtttagagtcacactcccagtcccaggccagt
ttgagaggagcagactgtctgcttatgcgaagcaggcgtcacatccattccccaggaaga
cactgtcagtccccggcccaaaccaggcacatggaggcctacgtgaagcccaagatgaga
ccaaagctggagacccctctgaccgagtccgactcggcgtccctggcctccagcagtgac
cagcagaacagcagcactgaccagtacattcaggtcatccacaacaaggagcactatctc
aagtccgatgctaggcaaggaaaacttgccaaaaagaagtccaaaaccagctttgatcaa
attgccacagagtccaatgacctggtcttctccaatgtgtga
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