Etheostoma spectabile (orangethroat darter): 116703041
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Entry
116703041 CDS
T08457
Symbol
lrrc4b
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116703041 (lrrc4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
esp04515
]
116703041 (lrrc4b)
Cell adhesion molecules [BR:
esp04515
]
Immunoglobulin superfamily
NGL family
116703041 (lrrc4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
Ig_2
LRRNT
Motif
Other DBs
NCBI-GeneID:
116703041
NCBI-ProteinID:
XP_032393501
LinkDB
All DBs
Position
15:17043208..17080926
Genome browser
AA seq
733 aa
AA seq
DB search
MRIATLTCLPGPSPFLFLLAQLLLRLLLPGSELVGAASSCPSLCTCSNQASRVICTRQNL
EEVPESISVNTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEIGAFNGLPNLN
TLELFDNRLTLVPSHAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDF
ISDAAFVGLINLRYLNLGMCGLKDIPKLTALVRLEELELSGNRLEIIRPGSFQGLVSLRK
LWLMHSQVSVIERNAFDDLKSLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWICNC
DVLWLSWWLKETVPSNTTCCARCHAPPVLKGKYIGELDQSHFTCFAPVIVEPPTDLNVTE
GMAAELKCRTSTSTTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNAAGNTTATAVLNVTAADASVNYTYFTTVTVETVETPGDKESALVAINETFIRVYPGP
TPSGHLWPDGVPTTASSLSAAWSSSSPRATRPTFTVPITEPGFSGLDDVMKTTKIIIGCF
VAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGAGANGRGSGISGGSTVT
QSGSSIGGGQNLRLHHPEIVNLPNLARSEHLNHYYKTHHFNNNMMSLGMGTGTGVGLNNN
NNPSSCSQSQNTSISCSQVTTSGGTPTGGTLPCPVPLPQLGLHSSLKGLMGKNQNEPLLF
KSGSKENVQETQI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgctgacctgccttcccggcccttcccccttcctctttctattggcc
cagcttctactgcggctcctcctccctgggtcggagttggtgggagccgcttcctcctgc
ccctccctctgcacctgctccaaccaggccagccgagtcatctgcaccaggcagaacctg
gaggaggtgcctgaaagcatatcagtcaacacacgatacctcaacctgcaggagaactcc
atacaggttatcaagtccgacactttcaagcacttgagacaccttgagatcctccagctc
tccaagaatcagatccgtcagattgaaatcggagcattcaatggcctccccaacctcaac
acattggagctcttcgacaaccgtctcacactggtgccatcacatgcctttgagtacctc
agcaagctacgggagctgtggctgcgcaacaaccccattgagactctgccaggctatgcc
ttccaccgtgtgccctcgctacgtcgcctggacctgggtgagctcaagaagttggatttc
atctcagacgcagcctttgtgggcctcatcaatctacgctacctgaatctgggcatgtgt
gggctgaaggacattcccaaactgacagcgcttgtgcgtttggaggagctggagctgtca
ggaaaccgactggagatcatccgacccgggtccttccagggcctggtgtccctacgcaag
ctgtggctaatgcactcacaggtgtccgtcattgagcgcaacgcctttgatgacctgaaa
agcctggaagagctcaacctgtcccataattccctgcactccttgccccatgacctgttt
acacctcttcatcagctggagagggtacacctcaaccacaacccctggatctgcaactgt
gatgtgctttggctaagttggtggttgaaagagacggtgcccagcaacaccacctgctgc
gcccgctgccacgctccgccagttttaaagggcaagtacattggagagcttgaccagagt
cacttcacctgctttgcgcctgtcattgtggaaccccctacagacctcaatgtcaccgag
ggtatggctgctgagctcaagtgtcgcacaagcacctccacgacatctgtcaactggatc
accccgaatggcacactaatgacccatggctcctaccgggtacggatatccgtcctgcat
gatggcacactcaacttcacgaatgtcactctgcgtgatacgggccagtacacctgcatg
gttaccaacgctgctggcaataccacggcaactgctgtcctcaatgtcaccgccgctgat
gccagtgtcaactacacctactttacaacagtcacagtggaaacagttgagacccctgga
gataaagagtctgcattggtagccatcaatgaaacattcatacgggtttaccctggcccc
acgccctcgggccacctgtggccagacggtgttcctaccactgcctcctctctgtcagca
gcctggtcctcctcctctcctcgggccacccgacccacgttcactgtgcccatcactgag
ccaggcttctcaggcttggatgatgtgatgaagaccaccaaaatcatcattggctgcttt
gtagccattaccttcatggcagcggtgatgcttgtggtgttctacaagctgaggaaacag
caccagctgcataaacaccatggccctgctcgtgctattgagatcatcaatgtggaggat
gagctgggggctggggccaatggtcggggcagtggcatctcaggaggctccacggtgacg
cagagcggaagtagtataggagggggccagaacctcaggctgcaccacccagagatagtc
aacctgccgaacctggcccgatcagagcacctcaaccactactacaaaactcatcacttc
aacaacaacatgatgagcctgggcatgggcacaggcactggtgtgggcctcaacaacaac
aacaacccatcatcttgctctcagtctcagaacacgtctatatcctgttcccaggtgaca
accagtggaggaacgcccacaggtggcaccctgccctgccctgtgcccctgccccagttg
ggtctccatagctctctgaaaggcctaatggggaaaaaccagaatgagcccctgcttttt
aagagcggctccaaggaaaatgtgcaagagactcaaatttga
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