Etheostoma spectabile (orangethroat darter): 116703046
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Entry
116703046 CDS
T08457
Symbol
rnps1
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03013
Nucleocytoplasmic transport
esp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116703046 (rnps1)
03015 mRNA surveillance pathway
116703046 (rnps1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116703046 (rnps1)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116703046 (rnps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
RRM_5
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
116703046
NCBI-ProteinID:
XP_032393509
LinkDB
All DBs
Position
15:9148312..9151049
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AA seq
280 aa
AA seq
DB search
MAPSPTKRKEEEKTKDRGKEKTTTKEGDKERGREKARKRRSASTGSSSSRSRSSSTSSSS
SGSSSGSSSGSSSSGSSRSGSSSSRSSSSSSSSGSPSPSRRRHDNRRRSRSASKTQKRGD
DKERRKRSPSPKPTKVHLGRLTRNVTKDHIQEIFSTYGKIKMVEMPMDRVHPHLSRGYAY
VEFETPEEAQKALKHMDGGQIDGQEIAASAVLTQRIRPPPRRPSPPRRMPPPPPMWRRSP
PRMRRRSRSPRRRSPVRRRSRSRSPGRRRHRSRSSSNSSR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggcaccatcacccacaaagcggaaggaggaggaaaaaacaaaagacagaggcaaagaa
aagactactacaaaggaaggagacaaggagagagggagggagaaagcaaggaaacgtcgc
agtgcctccactggcagcagcagcagcaggtctaggtctagctctacttcaagcagcagc
tctggttccagctcaggttcctcaagtggatccagctcatccggctccagccgctctggt
tcttcaagctctcgttcctcctcctcttccagctcctcaggctcccctagccccagccgt
agacgccatgacaaccgccgccgctcccgctcagcgtccaaaacacaaaagaggggagac
gataaggagcgaaggaaaagaagcccgagccccaaaccaactaaagttcacttagggcgg
ctgactaggaatgttaccaaggaccacatccaggagatcttttccacatatggaaaaatc
aaaatggtcgaaatgccaatggacagggtccacccacacctgtccaggggctatgcttat
gtggagtttgagactcctgaggaggcccagaaggccctcaaacacatggatggaggtcag
attgatggacaagaaattgctgcatctgcggtgctgactcaacgaatccgccctccacct
cgtagaccttctccccctcgcagaatgcccccaccaccacctatgtggcgccgcagtcca
ccacgcatgaggagaagatcccgctccccgaggaggcggtccccagtacgccgccgctct
cgctcgaggtctcctggtcgcaggcgtcatcgctctcgttccagctccaactcctccaga
tag
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