Etheostoma spectabile (orangethroat darter): 116703057
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Entry
116703057 CDS
T08457
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04120
Ubiquitin mediated proteolysis
esp04137
Mitophagy - animal
esp04144
Endocytosis
esp04340
Hedgehog signaling pathway
esp04350
TGF-beta signaling pathway
esp04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116703057
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
116703057
04350 TGF-beta signaling pathway
116703057
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116703057
04137 Mitophagy - animal
116703057
09144 Cellular community - eukaryotes
04520 Adherens junction
116703057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116703057
04121 Ubiquitin system [BR:
esp04121
]
116703057
03029 Mitochondrial biogenesis [BR:
esp03029
]
116703057
Enzymes [BR:
esp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116703057
Membrane trafficking [BR:
esp04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
116703057
Autophagy
Mitophagy
Other mitophagy associated proteins
116703057
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
HECT type E3
116703057
Mitochondrial biogenesis [BR:
esp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
116703057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
116703057
NCBI-ProteinID:
XP_032393531
LinkDB
All DBs
Position
15:complement(2780491..2800174)
Genome browser
AA seq
729 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISIWNHKKIHKRQGAGFLGCIRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLLENDGPVFEGCFSEEPLPYSDPTGA
AGGGNCRLDSPSQEGRLQTQRIRGQDSRGHGHTPQNRPHGHQPPDLPEGYEQRTTVQGQV
YFLHTQTGVSTWHDPRIPRDLASVSCEELGPLPVGWEVRSTVSGRIYFVDHNNRTTQFTD
PRLHTIISQQSQAKESSQAPPMDVGGEEGGGGGVGGGGDGDVAARYERDLVHKLKLLRHE
LSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWL
YLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRVMGLAVFHGHYING
SFTLPFYKQLLGKPIQLNDLETTDPELHKSLVWILENDITSVLDHTFCVEHNAFGKFLQH
ELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFSELIPQHLLKPFDHKEL
ELIIGGLGKIDLADWKTNTRLKHCTSESNVVRWFWQAVEAFSEERRGRLLQFVTGSTRVP
LQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAV
EETCGFAVE
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggactcggaggaacgggtccagcatcaaaatccgactgacagtatta
tgtgccaagaacctcgcaaagaaagacttctttcgcctgccagatccatttgccaaggtt
gtggtggacggatcaggtcaatgccactctacagacacagtcaagagcacactggacccc
aaatggaatcagcactacgacctctacattggaaagacagactccatcaccatcagtata
tggaaccacaagaagatccataaaagacagggggcgggcttcctgggctgcatacgactg
ctttccaacgccatcagcaggctaaaagacacaggataccagcgtctagatctatgtaag
ctgaacccctcggacagtgacgcagtgcgggggcagatagtagtgagcttacagacgcga
gaccgtatcggcagcggaggccctgtggtggactgcagaggccttttggaaaatgatggg
cctgtgttcgagggatgtttcagtgaagagccgctgccctactccgaccccacgggtgcg
gcggggggcgggaactgtcggcttgactcacccagtcaggagggccgtcttcagacgcag
agaatcagagggcaggactccagaggccatggacacacccctcagaacagaccgcatggg
caccaaccgcctgacctgccagagggatacgagcaacgaacaacagtgcagggccaggtg
tacttcctccacacacagacgggcgtcagcacctggcacgaccctcggataccgcgggac
ctggccagtgtgagctgtgaggagcttgggcctttgccagtgggctgggaggtccggagc
accgtgtcaggccggatctactttgtggaccacaacaaccgcacaacacagttcacagac
ccgcgcctacataccattatcagccagcaatcccaagcgaaggaatcctcgcaagccccc
ccgatggatgtggggggtgaggaagggggaggtggcggagtgggcggcggaggagatgga
gacgtggcagcgcgctacgagagagacttggtccataaattgaagctgctccgccacgag
ctgtccttgcagcagcctcaagcaggacactgtcgcatagaggtgtcccgggaggagatc
tttgaggagtcatatcgacagataatgaagatgaggcccaaggacttgaagaagcgtctg
atggtgaagttcaggggagaggagggcctggactacggtggggtggccagggagtggctg
tacctgctgtgtcatgaaatgttgaacccctattacggcctgttccagtactccacagac
aatatctacacactacagatcaaccccgactcctccatcaaccctgaccacctgtcatat
ttccactttgtgggccgtgtgatgggcctggccgtttttcatggtcactacatcaacggg
agcttcacgctgcccttctacaaacagctgctaggcaaacccatccagctcaacgacctg
gagacgaccgaccccgagttgcacaagagcctcgtctggatattagagaatgacatcacg
tcagtcctcgaccacactttctgcgtggagcacaacgcctttgggaagttcttgcaacat
gaactcaaacctaatggccgcaatatccctgtcactgaggagaacaaaaaagaatacgtc
agactttatgtaaactggaggtttatgcgtggaattgaagcccagtttctggctctacag
aagggattcagtgaactcatcccccagcacctcctcaaacctttcgaccataaagaactt
gagttgatcatcggtggactggggaaaatagatcttgcagactggaagactaacacccgc
ctgaagcactgcacaagtgaaagcaacgtggtgcggtggttctggcaggcagtggaggcc
ttcagcgaggagaggagagggcgcctcctgcagtttgtcacaggctccaccagggtcccc
ttacaagggttcaaagcgttgcagggttctacaggttctgcaggaccaaggctcttcacc
atccatttgatagacgccaacacagacaacctgcccaaggctcacacctgttttaaccgg
atagacatccctccctacgagtcttacgagaagctctatgagaaactgctgacggctgtg
gaggagacctgcggcttcgctgtggagtga
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