Etheostoma spectabile (orangethroat darter): 116703099
Help
Entry
116703099 CDS
T08457
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03440
Homologous recombination
esp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116703099 (top3a)
03460 Fanconi anemia pathway
116703099 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
esp03032
]
116703099 (top3a)
03400 DNA repair and recombination proteins [BR:
esp03400
]
116703099 (top3a)
Enzymes [BR:
esp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
116703099 (top3a)
DNA replication proteins [BR:
esp03032
]
Eukaryotic type
DNA Topoisomerases
116703099 (top3a)
DNA repair and recombination proteins [BR:
esp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
116703099 (top3a)
FA (Fanconi anemia) pathway
116703099 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Lar_restr_allev
Ogr_Delta
DUF2256
Motif
Other DBs
NCBI-GeneID:
116703099
NCBI-ProteinID:
XP_032393600
LinkDB
All DBs
Position
15:complement(2544175..2558254)
Genome browser
AA seq
1036 aa
AA seq
DB search
MLVHLLGRALLRSAPTLQRLAVPRRGLCAAQSDRCPDTPQQQQQQQQPADMIRGRAQIKR
VLCVAEKNDAAKGISEIMSNGGFRRREGMSKFNKIYEYEYHLFGQNVTVTMTSVSGHLLG
MEFKTQYRKWQSCNPVLLFDVEVEKHCPENMKQIKRTLEKEVRQCQVLVIWTDCDREGEN
IGFEVIEVCKAVKQNLQVFRAKFSEITPNSIRRACETLTEPDANISDAVDVRQELDLRIG
ASFTRFQTLRLQKIFPESLANQLISYGSCQFPTLGFVVERFKAIQAFIPETFYKIKVLHE
MGEDTVDFSWKRNRLFNHTACLVLYQICMENPIATVTSVTSKPKSKWRPLPLDTVELEKL
ASRKLRINAKETMKIAEKLYTQGYISYPRTETNIFPENLPLGPLVEQQTQSPIWGTFAQR
VMEQPGGPNPRQGKKSDQAHPPIHPTKYSSTLQGNEGRVYEFIVRHFLACVSQDALGQET
VVDIDIAHENFSSSGLMIIAKNYLDVYPYDRWSAKVIPVYEQGSQFQPSAIEMVDGQTSP
PQLLTEADLISLMEKHGIGTDATHADHIETIKSRMYVGLTADQRFLPGELGMGLVEGYNS
MGYEMSKPNLRAELEADLKLVSEGRKDKQSVLQHHIQKYKSVFIESVKKAKKLDEALSPY
LGAAQEVAEAEQQDMEFPLPVRKCPHCGQDMVLRKKREGNSKFLSCTGFPACKSAVWFPD
TVLEVSRDDSICPTCLPHPVHMLKFKFRRGSLPPMMPLEFVGCIGGCDETLREVLDLRYL
RPGGGGAGGGGGGLRGGRREDPLPPAPRPPRSEPPRALSSNSRTSLPPAPSWTPQPQPPA
GGSALGVDNDAIVCNCGQDALLLTVRKDGPNQGRQFYKCNAGGCNFFLWADQPSEQGEPQ
GRGPPLHMPPRPPLGFRTTPGASRGREGGAGGQTMCNCNETAVTRTVQKDGPNKGRVFHA
CGKPREQQCGFFQWADENQPPLVGFGGGFNGGGDGGTKGRKITGGATANKPAAAKKPRTC
GICHNPGHTRVTCPQR
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgctagttcacctcctcggcagagctctgcttcggtcggctccgacgttacagcggcta
gcggtcccacggagggggctctgtgcggcgcagagtgaccggtgtccggacacaccgcag
cagcagcagcagcagcagcagccagcagacatgatccggggccgggcccagatcaagcgg
gtcctctgtgtggccgagaagaacgatgcagccaaaggcatctcagagataatgtccaac
ggcgggttccggaggagggaggggatgtcaaagtttaataaaatctatgagtatgaatat
catctctttggtcagaatgtgacggtaacgatgacgtcagtatcaggccatttactggga
atggagtttaaaacacagtaccggaaatggcaaagttgcaatcctgtgctgttatttgat
gtcgaggtagagaagcactgtccggaaaacatgaaacaaatcaagcgaacactagagaaa
gaggtgagacagtgccaggtcttagtcatctggactgattgtgaccgagagggagaaaac
attggctttgaagtcatagaagtctgcaaagcagtgaagcaaaatttacaagtctttcgg
gcaaagttttctgagatcacccccaactccattcggagagcttgtgagactcttactgag
ccagatgccaacatcagcgatgctgtcgatgtccgtcaggagctggacctgcgaataggt
gcgtccttcactcgattccaaacgcttcgcttgcagaagatcttcccagagtctttggcc
aatcagctgatctcatacggcagttgtcagtttcccactctgggctttgttgtggagcgc
ttcaaagccatccaggctttcatacccgagactttctacaagatcaaagtgctgcacgag
atgggggaggacactgttgacttcagttggaaaagaaaccgtctcttcaaccacacagca
tgcctggttctctaccagatctgcatggagaatcccatagcaacagtcacctcagtaacc
agcaaacccaagagcaagtggagaccgctgcctttggacactgtggaactggagaaactt
gcatctcggaagctaagaataaatgccaaagagaccatgaaaattgcagaaaaactgtat
acccaagggtacatcagctacccccgaacagagacaaacatttttcccgaaaacctgcct
ctcggccccctggtggagcagcagacacaaagcccgatctgggggacgtttgcccagaga
gtgatggagcagccggggggtcccaacccacgacagggcaagaaatctgaccaagcccat
cccccgattcaccccaccaagtactccagtacactgcagggcaatgagggacgtgtgtac
gagttcattgtccggcacttcctggcatgcgtatcccaagatgctttggggcaggagact
gtggtggacatagacatcgcccatgagaacttctcctcctcgggactcatgatcattgca
aagaactacttggacgtttacccgtatgacaggtggagtgccaaggtgattccagtgtat
gagcaaggctcccagttccagccttctgctatcgagatggtggatggacagacgagtcct
ccgcagctgctcactgaagccgacctcatatccctgatggagaagcacggcattggcaca
gatgcaacccacgcagatcacatcgagaccataaagagtcgcatgtatgtgggcttaaca
gctgaccagaggtttctgcctggagagctcggcatgggactggtggagggttacaactcc
atgggctatgagatgtccaaaccaaacctgcgtgctgaattggaggcggacctcaagctg
gtatcagagggcaggaaggacaaacagtctgtcctgcagcaccacatccagaaatacaag
tctgtcttcattgagtctgtcaagaaggcgaagaagttggatgaagccctgtcgccatat
ctgggtgcagctcaggaagtggctgaagcagagcagcaggacatggagttcccgctgccg
gtcaggaagtgtcctcactgcggacaggacatggtgctgaggaagaagagggagggaaac
agtaagttcctgtcctgcacaggcttcccagcctgtaagtcagcggtgtggttccccgac
acggtgctggaggtcagcagagatgacagcatttgtcccacctgtctgccgcacccggtt
cacatgttgaagttcaagttccgcaggggcagcctccctcccatgatgcctttagaattt
gttggctgcatcggtggatgtgacgagacactcagagaagtgctggacctgaggtacctc
cgacccgggggagggggagcgggaggtggggggggtggactacggggaggaagaagagag
gaccctcttccaccagctccaaggccccccagatcagagccacccagagccctgagttca
aattctcgaacttcccttcctcctgccccatcctggaccccgcagccacaacctccagca
ggcggcagcgctctgggtgtagacaatgatgccattgtgtgtaactgtggtcaggatgct
ctcctcctgaccgtgcgcaaagacggtcccaaccaaggccgtcagttctacaagtgcaac
gcggggggctgcaacttcttcctgtgggcggatcagccaagtgagcagggggagccacag
ggtcgagggcctccgctgcacatgccgccaaggccccctctagggttcaggactacccct
ggagcaagcagagggcgggaagggggtgcaggaggacagacaatgtgtaactgtaatgag
acagcggtgacacgaacggtgcagaaggacgggccaaacaagggccgggtgttccacgcc
tgcgggaaacctagagagcagcagtgtggcttcttccaatgggctgatgagaaccagccg
ccactagttgggttcggtgggggatttaatggcggtggagacggagggacgaaggggagg
aagatcactggaggtgccaccgctaacaaacctgcagctgctaagaagcctcgtacctgt
ggcatctgccacaacccgggacacacccgagtcacctgtccccagcgctga
DBGET
integrated database retrieval system
