Etheostoma spectabile (orangethroat darter): 116703158
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Entry
116703158 CDS
T08457
Name
(RefSeq) transcription factor Sox-9-like
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116703158
Transcription factors [BR:
esp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116703158
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116703158
NCBI-ProteinID:
XP_032393687
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All DBs
Position
15:complement(9552292..9556186)
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AA seq
480 aa
AA seq
DB search
MNLLDPYLKMTEEQEKCHSDAPSPSMSEDSAGSPCPSGSGSDTENTRPSDNHLLLGPDYK
KEGEEEKFPVCIRDAVSQVLKGYDWTLVPMPVRVNGSSKSKPHVKRPMNAFMVWAQAARR
KLADQYPHLHNAELSKTLGKLWRLLNEAEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKS
VKNGQNDPEDGEQTHISPNAIFKALQQADSPASSLGEVHSPGEHSGQSQGPPTPPTTPKT
DLHSSKADLKREGRPMQEGTSRQLNIDFGAVDIGELSSEVISNMGSFDVDEFDQYLPPHS
HAGVNGAAQAGYTSGYGISSSSVNQVANVSAHAWMSKQQQQQQHSLTTLGGGGEQGQQGQ
QRTTQIKTEQLSPSHYSEQQGSPQHVTYGSFNLQHYSTSSYPSITRAQYDYSDHQGGANS
YYSHAAGQSSGLYSTFSYMSPSQRPMYTPIADTTGVPSVPQTHSPQHWEQQPIYTQLSRP
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcctcgatccttacctaaagatgacagaagaacaggagaagtgtcactctgac
gctcccagtcccagcatgtctgaggactccgcaggctcgccgtgtccgtccgggtccggt
tcggacactgagaacacccggccgtccgacaaccacctcctcttgggtccagactacaag
aaggaaggcgaagaagaaaagttccccgtgtgtatcagagatgcggtgtcccaggtgttg
aagggttacgactggacgctggtgcccatgccggtgcgcgttaacggctcaagtaaaagt
aaacctcacgtcaaaagacccatgaacgcattcatggtctgggctcaagctgcacggagg
aagctggccgatcaatacccgcatctgcacaacgcggaactcagcaaaaccctgggcaaa
ctttggagattgctcaacgaagcagagaagcgcccgtttgtggaagaagctgagcgtctg
agagtgcagcataagaaggaccaccccgactacaaatatcagccaaggcggagaaagtct
gtcaagaatggccaaaacgaccccgaggacggcgagcaaacccacatctctccaaatgcg
atcttcaaggcgctgcagcaggccgattctccagcgtctagtttgggcgaggtgcattct
ccaggagagcactcaggtcagtcccaaggcccaccaacacccccaaccacccccaagaca
gacctccactctagcaaagctgatctgaagcgggaggggcgccccatgcaggagggcacc
agtcgccagctcaacatcgactttggagctgtggacattggcgagctgagcagcgaggtc
atctccaacatggggagctttgatgtcgatgagtttgatcagtacctgccacctcacagc
catgctggggtgaacggagcggcccaggctggctacaccagcggctacggcatcagcagc
tcttcagtcaaccaggtggccaatgtcagtgcccacgcctggatgtccaagcagcagcag
cagcagcagcactctctgacaaccctgggtggaggaggagagcaaggccagcagggtcag
cagagaaccacccaaatcaagacagagcagctgagccccagccactacagtgagcaacaa
ggctccccacagcacgtcacctatgggtccttcaacctgcagcactacagcacctcctct
tacccatccatcacaagagcacagtatgactattcagaccatcaaggtggtgccaactcc
tactacagccacgcggctggccaaagctccggtctgtactccaccttcagctacatgagc
cccagtcagaggccaatgtacaccccgatcgctgacaccactggggtgccctctgttccc
cagacccacagtccgcagcattgggagcagcagcccatttacacacagctctccaggcca
tga
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