Etheostoma spectabile (orangethroat darter): 116703207
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Entry
116703207 CDS
T08457
Name
(RefSeq) transcription factor Sox-8
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116703207
Transcription factors [BR:
esp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116703207
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sox_N
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116703207
NCBI-ProteinID:
XP_032393739
LinkDB
All DBs
Position
15:9272977..9276717
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AA seq
468 aa
AA seq
DB search
MLKMTEEHDKCGSDQPCSPSGTNSSMSQDESDSDAPSSPTGSDGQGSLLASLGKKMDSED
DDRFPACIRDAVSQVLKGYDWSLVPMPVRGNGSLKNKPHVKRPMNAFMVWAQAARRKLAD
QYPHLHNAELSKTLGKLWRLLSESEKRPFVDEAERLRVQHKKDHPDYKYQPRRRKNMKPG
QSDSDSGAELAHHMYKAEPGMGGLAGLTDGHHHPEHAGQPHGPPTPPTTPKTDLHHGMKQ
DLKHEGRRLVDSNRQNIDFSNVDISELSTDVISNMETFDVHEFDQYLPLNGHASGSSSLP
SDHSHGQAPAPGGSYTSSYSHAGANGSTWTRKGTMSSSAPSASEVGQHRLHIKTEQLSPS
HYSEHSHGSPSHSDYGSYSSQACVTSATSAASAAASFSSSQCDYTDLQSSNYYNPYSGYP
SSLYQYPYFHSSRRPYGSPILNSLSMAPAHSPTASSWDQPVYTTLSRP
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaatgacagaggagcatgacaaatgtggcagcgaccagccgtgtagtccatct
ggcacaaacagctccatgtcccaggacgagtccgactccgatgctccgtcctcaccaact
ggctccgacggccaaggatccctgctcgccagtttgggcaagaaaatggactcagaggat
gacgaccggttcccagcttgcatacgggatgcagtctctcaggtcctcaaggggtacgac
tggtccttggtgcctatgcccgtgagggggaatggatccctgaagaataaacctcacgtc
aagagacccatgaatgctttcatggtttgggcgcaagcggcccgcagaaagctggcggat
cagtatccacacctgcacaatgccgaactgagcaagactctgggaaaactctggcgtttg
ctctcagaaagtgagaagaggccatttgtagatgaagcagagagactccgggttcagcac
aagaaagatcatccagactacaagtaccagccccggagacggaagaatatgaaaccaggc
cagagcgactcagactcaggagcagaactggcacatcacatgtacaaagctgaaccaggg
atgggaggactggcagggttgactgatggacaccaccaccctgaacatgcagggcagccc
catggtccccctacaccacccactactcccaaaacagacctgcaccatgggatgaagcag
gatctgaaacatgaaggccgtcgtcttgttgacagcaacaggcaaaacattgacttcagc
aacgtagacatctctgagctaagcactgatgtcatcagcaacatggagaccttcgatgtg
cacgagtttgaccagtacctccccctcaacggccatgcctcgggctcttccagcctgccg
tcagaccacagccacgggcaggctcccgcccctggtggctcttacacttcctcatacagc
catgcaggtgccaacggttcaacatggacccgcaagggcaccatgtcctcttctgctccc
tccgccagcgaggtgggccagcaccggctccatattaaaacagagcaactgagccccagc
cactacagcgagcactcccacgggtcaccctcacactctgattacggctcctacagtagc
caagcctgtgtcacctcggccacatcagctgcctcggctgcagcctctttctccagctcc
cagtgtgactatactgatctccagagctccaactattacaacccttactccggctacccc
tctagcctctaccagtacccctactttcactcatccaggcggccctacggcagcccgatc
cttaacagtctgtccatggctcctgcccacagccccaccgcctcaagctgggaccagccc
gtctacaccacgctctctcgaccctga
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