Etheostoma spectabile (orangethroat darter): 116703299
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Entry
116703299 CDS
T08457
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04137
Mitophagy - animal
esp04144
Endocytosis
esp04145
Phagosome
esp04148
Efferocytosis
esp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116703299 (rab5c)
04145 Phagosome
116703299 (rab5c)
04137 Mitophagy - animal
116703299 (rab5c)
04148 Efferocytosis
116703299 (rab5c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116703299 (rab5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116703299 (rab5c)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esp04147
]
116703299 (rab5c)
04031 GTP-binding proteins [BR:
esp04031
]
116703299 (rab5c)
Membrane trafficking [BR:
esp04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
116703299 (rab5c)
Endosome - Lysosome transport
116703299 (rab5c)
Exosome [BR:
esp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116703299 (rab5c)
Exosomal proteins of other body fluids (saliva and urine)
116703299 (rab5c)
Exosomal proteins of colorectal cancer cells
116703299 (rab5c)
Exosomal proteins of bladder cancer cells
116703299 (rab5c)
GTP-binding proteins [BR:
esp04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
116703299 (rab5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
AAA_16
Motif
Other DBs
NCBI-GeneID:
116703299
NCBI-ProteinID:
XP_032393849
LinkDB
All DBs
Position
15:14276506..14287064
Genome browser
AA seq
220 aa
AA seq
DB search
MAGRGGPARTNGTAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAIDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQGGAAAGGRTRGGVDLQEAAPQGRSGQCCGGGN
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggcagggcgaggcggaccagcacggaccaacggcacggcagcgagcaacaagatctgc
cagtttaagctagtgctgttgggggaatcggcggtgggaaagtccagcttggtgctgcgc
tttgttaaaggccagttccacgagtaccaggagagcaccatcggagctgccttcctcaca
cagacggtatgtttggacgatacgacggtcaagtttgagatctgggacactgcaggacag
gaacggtatcacagcttggcacccatgtactacaggggagcccaggccgccatcgtggtc
tacgatatcaccaacacagatacattcacacgtgctaagaactgggtgaaagagctccag
cgacaagccagcccgaatattgttattgcactggcaggaaacaaagcggacctggccaac
aagagagccatagatttccaggaagcacaagcatatgcagatgacaacagtttgctcttc
atggagacttcagccaagacggctatgaatgtcaatgagatttttatggctatcgccaaa
aagctccccaagaacgagccccagggtggagcggccgctggtggacgaacccgaggcggc
gtggacctgcaggaagctgcaccgcagggccgaagcggccagtgctgtgggggcgggaac
taa
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