Etheostoma spectabile (orangethroat darter): 116703366
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Entry
116703366 CDS
T08457
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116703366 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116703366 (gtf2f1)
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
116703366 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
116703366
NCBI-ProteinID:
XP_032393959
LinkDB
All DBs
Position
15:complement(6025243..6032806)
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AA seq
534 aa
AA seq
DB search
MTSLGGSSSSATEYTVRVPKNTSKKYNIMAFNSGDRVNCSTWTQARMERDMSARRIYGEE
ESAEGAAGSEFGKKHREEARRKKYGIVTREFKGEDQPWILKVNGKAGKRFRGLKKGGVTE
NASYYIFTQCPDGAFEAFPVHGWYNFTPQFKHRTLTAEEAEEEWGRRNKVVNHFSIMLQR
RFREQERGGEDDDDENEKSGKKKKKGGGRGGDLRIHDLEEDLEMSSDDSDSSMGDDGEGK
TKAKKATGKGKAKKKKRKSSDKEALEDSDDGDYEGLEVDYMSDESSSSDEELEKGKSSKG
EHHPKGIDEASESEEESEEEKQNEEEAKDEEEEEEEGKKTPVQPEKKKKKDSSGESESSD
DSDIEGETASALFMKKRTPPKRGGRGSAGSSRTGSRPGTPSIDSASTSNTLSAAASKLEQ
GKRPTLGPSTDSPAAKRLKMEPSSQSPVPSGKSTPQPPSGKSTPSSSDVQLTEEAVRRYL
IRKPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNVNDKMHFYLTE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgacttctctggggggcagcagttcctcagccacagaatacacggtgcgagtccccaaa
aacaccagtaagaagtacaacatcatggctttcaattcaggagacagagtcaactgttca
acttggacacaggctcgcatggaaagagacatgagtgctcggcggatatatggggaggaa
gagtcagcggaaggcgcggctggcagtgagtttggcaaaaagcaccgcgaggaagcacgg
cggaagaagtatggtattgtgacacgtgagttcaaaggggaggaccagccctggattctc
aaggtcaatggcaaggccggcaagaggttcagaggtctgaagaagggcggtgttacagaa
aatgcatcctactacatctttacacagtgtcccgatggagcctttgaggctttccctgtc
cacggctggtacaactttacaccgcagttcaagcaccgaactctcactgctgaggaggct
gaggaggagtggggcagaagaaacaaggtggtgaatcacttcagcatcatgcttcagaga
cgtttccgggagcaggaacgtggtggtgaggatgatgacgatgagaacgagaagtcgggg
aagaagaaaaagaaggggggtgggagagggggcgacctgcgcattcacgacctggaagag
gacctggagatgagcagcgatgacagtgacagcagtatgggggacgatggagagggcaag
acaaaggcgaaaaaagccacggggaaaggtaaagcaaagaagaagaagagaaagagcagt
gacaaagaggccttggaggacagcgatgacggtgactacgagggtctagaggtggattac
atgtccgatgaaagcagcagttcagacgaagagcttgaaaagggaaagtccagcaaaggg
gagcaccaccccaaagggatcgatgaggcgtctgaaagtgaggaagagagtgaggaggag
aaacagaatgaagaggaagcaaaagatgaggaggaagaagaagaggaaggaaagaaaacc
ccggtccaaccggaaaagaagaagaaaaaagacagcagcggcgagtcggaaagctccgac
gacagtgacatcgagggagagacagcctccgctctgttcatgaagaagcgcacgcctcct
aaacgtggaggacgtggctctgcgggcagctccaggactggcagtcgccccgggacacca
tccatagactctgcctccacctccaatacactcagtgctgctgccagcaagctagagcaa
ggtaagagaccgactctgggtcctagcactgactcacccgctgccaaaagactgaagatg
gagcccagcagtcagagccctgttccctctgggaagagtacgcctcaacccccgtcaggc
aaatccactcctagctcaagtgatgtgcagctaactgaggaagcggtccggcgttacctc
atccgtaaaccgatgaccaccaaagacctgctgaagaagttccagaccaagcgcacaggt
ttgagcagtgagcagactgtcaacgtgctggcacagatcctgaagcgtctcaatccggag
cgcaagaacgtaaatgataaaatgcacttctacctcactgagtaa
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