Etheostoma spectabile (orangethroat darter): 116703414
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Entry
116703414 CDS
T08457
Symbol
rfx1
Name
(RefSeq) MHC class II regulatory factor RFX1 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116703414 (rfx1)
Transcription factors [BR:
esp03000
]
Eukaryotic type
Other basic domains
RF-X
116703414 (rfx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
DUF3156
Spc42p
Motif
Other DBs
NCBI-GeneID:
116703414
NCBI-ProteinID:
XP_032394027
LinkDB
All DBs
Position
2:22236332..22249310
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AA seq
834 aa
AA seq
DB search
MATSGYSEDLQPQQANTVTIATPSPTTPSSAKTAHFLSEIPPTSGAIASANQSATVSKTG
QDALCSQAPPINQKAVVLTTPTQHYVSQEIQHSAVQKSNGQSNSPQYIIVTVTEGSVHSN
DSLSDSSPPATGVPTQVVQPVQTTQQRSVLQAVSQAAKRIQIKNLQSGDIHREVEHVYSG
QVQYVDGGGDTTFTTSSIRSSNYPFSDSPLYSQTPSSSSSYYEATPSSESDITGSVTSQP
VSVATAGANSGGAATGGGGYVIQGGYVLGGTAAGGGGQSYTSPNARAPPATVQWLCDNYE
GAEGVSLPRCTLYYHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYY
GLRIKSGSPLLRLMDEQQHMAMRQQPFSQKNRIKPLQKSQGITNGTSGGMGQQQAAALCD
ISAQVQQYQQFLEASRPLPDFVDIDLQDGTLPDGILLEHLKAFQTLYREHCEAILDVMVN
LQFTLVETLWKSFWRFSQSSDSESLNLHNESEKRLPKSCLVVLCKYEPVLRWTKECDNLL
YQTLVEILIPDVLRPIPSALTQAIRNFAKSLENWLTGAMMNIPEEMVRIKVVCVGSFSQT
LRRYTSLNHLAQAARAVLQNSAQINQMLSDLNRVDFTNVQEQASWVCQCEDRVVQRLEQD
FKMTLQQQNSLEQWATWLEGVVSEALKPYEHNPIVLPKAAKVFLLNWSFYSSMVIRDLTL
RSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGVTPIAVMGEFASTVKSRISPDLEKEEE
EDDEEEESEDEGGDLVLQSSSLRAVDDEKDTMEPPAKLSRTSFNLHSLTDSTPS
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttctggatactcagaggaccttcagcctcagcaggccaatacagtaaccata
gcaacaccatctcctaccacaccctcatccgcaaagacggcacacttcctgtccgagatc
ccaccaacctctggagccattgcatcggctaaccaatcggccactgtctcaaaaacagga
caggacgcactttgttctcaagcgccgcccatcaaccagaaggcagtggttctgacgact
cccacgcagcactatgtatcccaagaaatccagcactctgctgtccagaaaagtaatggt
cagagcaactcgccccagtacatcatagtaactgttacagagggctcagttcactccaat
gacagcttgtcagactctagcccacctgccactggtgttcctactcaggtggtccaacca
gtgcagactacccaacagaggtcagtgttgcaagcggtgtcgcaggcagccaagaggatt
cagattaagaacctacagtctggggacattcaccgggaggtggagcatgtttactctggc
caggtgcagtatgtggacggaggaggagacacgacttttaccacgtcctccattcgatcg
agcaactaccctttctccgactcgcccctctactcgcagaccccttcctcctcgtcctcc
tactacgaggccacacccagctctgagtcagacatcactggctctgtcacctcgcagccc
gtttctgtggcaacagcgggagccaatagtgggggagctgctacgggcggagggggctat
gtcattcagggaggttatgtgttaggaggaacagcagcaggtggaggaggacagagttac
accagccctaacgctcgtgccccacccgctactgtgcagtggctgtgtgataactacgag
ggggcagagggggtaagtttacctcgctgcaccctctactaccactacctgctgcactgc
caggagcagaaactagaacctgttaatgctgcatccttcggcaaactcatcaggtctgtc
ttcatggggttgcgtacacggagattaggaaccagagggaactctaagtaccactactat
ggactgaggatcaaatctggttccccgctgctcagactgatggatgaacaacagcacatg
gcgatgaggcagcagcctttctcacagaaaaacaggataaagccacttcagaagtcacag
gggatcaccaatgggacatcaggtgggatgggtcagcagcaggcggcggcactatgtgat
atttcggcgcaggtgcaacagtaccagcagtttctggaggcatcaaggccgctgccagac
tttgtggacattgatctgcaagatggaaccctgcctgatgggatccttttagaacacctc
aaggcctttcagactctctacagggaacactgtgaggccatcctggacgtgatggtcaac
cttcagttcactctcgtggagacactttggaaatccttctggcggttcagccagagcagt
gacagcgaatcacttaacctgcacaatgagtctgagaagcgtctgcccaaatcgtgcctg
gtggtgctgtgtaagtatgagcctgtgctgcgctggaccaaagagtgtgacaacctgctc
taccagactctggtggagatcctcatccctgatgtactgagacccatccccagtgcctta
acccaggccatccgcaactttgccaagagtctggagaactggttgacaggcgccatgatg
aacatcccagaagagatggttcgcataaaggtagtgtgtgtgggctccttctcccagacg
ctgcgccgctataccagcctgaaccacctcgcccaggcagcccgcgcagtcctccagaac
tccgcccagatcaaccaaatgctctcagacctcaacagggttgatttcactaatgtacag
gagcaggcatcctgggtatgtcagtgtgaagaccgtgtggtacagaggctggaacaagac
tttaaaatgaccctgcagcagcagaactctctggagcagtgggctacctggctggaaggg
gttgtgtctgaggccctgaagccctacgagcacaaccctatcgtgctcccaaaggctgca
aaggttttcctgctcaactggtccttctatagctctatggtaatccgggacctgactttg
cgcagtgctgccagctttggctcctttcacctgatccgcttgctgtatgatgagtatatg
tactacctgatagaacaccgggtggcccaggctaaaggagtaacacccattgcggtcatg
ggagaatttgcaagcactgtcaagagccgaatctctccggacctggagaaagaagaagag
gaggatgacgaggaagaggaaagcgaggacgagggcggagatctcgtgctgcagtccagc
tcgctgagagcggttgatgacgagaaggacacgatggagccgcccgccaagctgtccagg
accagtttcaatctgcactctctgaccgacagcaccccatcttag
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