Etheostoma spectabile (orangethroat darter): 116703434
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Entry
116703434 CDS
T08457
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04010
MAPK signaling pathway
esp04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116703434
04020 Calcium signaling pathway
116703434
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116703434
Ion channels [BR:
esp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116703434
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
TMEM208_SND2
ETRAMP
Motif
Other DBs
NCBI-GeneID:
116703434
NCBI-ProteinID:
XP_032394057
LinkDB
All DBs
Position
15:6285316..6328925
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AA seq
1503 aa
AA seq
DB search
MVILLNCVTLGMYQPCENIDCTSDRCQILQAFDAFIYIFFALEMVVKMVALGIFGRRCYL
GDTWNRLDFFIVMAGMVEYSLDLQNINLSAIRTVRVLRPLKAINRVPSMRILVNLLLDTL
PMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCYLEENFNLSSGMTLPAPYYQPEENDER
PFICSLASDNGIMSCADVPARREGGRTCCLDREDALHRQALGLSPEPLANGSGAGEAVGL
CINWNQYYTRCHTGSGNPHKGAINFDNIVYAWIVIFQVITLEGWVEIMYYVMDAHSFYNF
IYFILLIIIGSFFMINLCLVVIATQFSETKQREHQLMQEQRAQCLSSSTLASMAEPGDCY
EELFQLVCHVLRKAKRRSAALYYTLRGKPPPPGGGRGYRRGGGNVNGERHHCRHPKTSHC
PHQSKQDHSSQPLANSISLPVPQNPEDCPICALSLKEGARAVGDSANREEDNEDAVKETG
KEENHLEERGDGEKKRKRTCFGHCKDIWNDMRRKLWGIVESKYFSRGIMIAILINTISMG
IEHHNQPEELTNVLEICNIVFTSMFTLEMVLKLTAFGFFEYLRNPYNIFDGIIVIISVCE
IIGQADGGLSVLRTFRLLRVIKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSI
LGMHIFGCKFSLKTEAGDTVPDRKNFDSLLWAIVTVFQILTQEDWNMVLYNGMASTSPFA
ALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSYSDDDRSSCNFEENDKQKDSLHLS
DPKICALTPNGHLDLSPLPHGLFPGERLTFALGSRRSSVISLGRANLEQRAMYPGRSYHN
WGRPLPTQPQALWARRSSWNSLGGCRPCASSSPSASPAFTPTSARPFYGYGLGGLGGVVG
GSLRIRGPRASSSPHRHHHLVHPDEEESLLSAPAVAPRSLHLPHPMLPGHFVPRRDRRAL
SLELPHLLQVPGPPHPPLPPHHPLPSITLHAHHRKKSFSGGMVISGGDGGGGLDGLGGLG
GVHQDCNGKTPLSQHHHSHHRHHTEHSGGANPQSQLMADVFPQVNTRSKDREDLDDDIEY
SLCFRIQKMLEAYKPDWCESREDWSVFLFSPQNKFRQICQSIIAHKLFDYVVLAFIFSNC
ITVALERPKILQGSLERVFLTISNYIFTAIFVSEMTLKVVSMGLYVGEQAYLRSSWNILD
GFLVFVSLIDIVVSMAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLITSLKPI
GNIVLICCAFFIIFGILGVQLFKGKFFYCFGPDVKNITNKSDCLQASYKWVHHKYNFDNL
GQALMSLFVLASKDGWVNIMYHGLDAVAVDQQPVTNNNPWMLLYFISFLLIVSFFVLNMF
VGVVVENFHKCRQHQEVEEAKRREEKRQRRMEKKRRKAQKLPYFASYGNIRLMIHTLCTN
HYLDLIITFIICINVITMSLEHFNQPHQRHRDTRRVHHHETSCCSMCWSNSNPYKGAVIA
LLI
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atggtgatcctgctcaactgtgtgacactgggcatgtaccagccctgtgagaacatcgac
tgcacctcggaccgctgccagatactgcaggcctttgatgcattcatctacatcttcttt
gcattggagatggtggtaaagatggtggctctagggatctttggccgtcgttgttacctg
ggagacacctggaacaggctggacttctttatcgtcatggctgggatggtagagtactca
ctggacctgcagaacatcaacctgtcggccattcggacagtgcgggtccttcggccactc
aaagccatcaacagagtgccaagtatgcgtatcctggtgaacctgctgctagacactcta
cccatgctaggcaatgtgctgctgctctgcttcttcgtattcttcatctttggcatcatc
ggcgtgcagctgtgggcggggctactgaggaatcgctgctacctggaggagaacttcaac
ctctcttcaggtatgaccctgcctgctccatattaccagcctgaggagaatgatgaacgc
cccttcatttgctccctggcatctgataatggcatcatgtcatgtgctgatgtgccggcg
aggcgcgaaggaggacgcacatgctgcctggacagggaggacgcgctccacagacaggct
ctgggcttgagtcctgagccactggctaacggtagtggtgccggtgaagcagtgggtctt
tgcatcaactggaaccagtattacactcgatgccacacaggaagtggaaacccccacaaa
ggtgccatcaactttgacaacattgtctacgcctggatcgtaatctttcaggtgatcact
ctggagggctgggtggagatcatgtattatgtaatggatgcccattccttctacaacttc
atctacttcattttactcatcattattggttcattcttcatgatcaacctgtgcctggtg
gttattgccacccagttctccgagaccaaacagcgggaacaccagctgatgcaggagcaa
agggcgcagtgcctgtcctcctccaccctggccagcatggctgagcctggagattgctat
gaggagctattccagctggtttgccatgtccttcgcaaggccaagaggaggtcagcagct
ctctactatactctgaggggcaaacccccaccacctgggggaggcaggggttacaggcgt
ggtggagggaatgtgaacggagagcggcatcattgcaggcatccaaaaacatcccactgt
ccgcaccagagcaagcaagaccacagctctcagccactagccaactccatcagtctgcct
gtccctcagaaccctgaggactgccctatatgtgcactatcactgaaagagggtgcgagg
gctgtgggagactctgccaacagggaggaagataatgaggatgcggtgaaagagacgggc
aaggaggagaaccatctagaggagaggggagatggagagaagaagaggaagaggacatgc
tttggacattgtaaagacatttggaatgatatgaggaggaaactttggggcattgtagag
agcaagtacttcagcaggggcattatgatcgctattctcatcaataccatcagtatgggc
attgagcatcataaccagcccgaagagctgaccaatgtcctggagatctgcaacattgtg
ttcaccagcatgttcaccttggagatggtcctcaagctgactgcttttggcttctttgag
tacctgaggaacccctacaacatctttgatggaataattgtcatcatcagtgtgtgtgag
atcatcggccaggcagacggcggcctgtcagtgctgaggaccttcaggctgctgagggtc
attaagctggtgaggttcatgcctgcgctgaggcggcagctggtggtcctgatgaagact
atggacaacgtggccactttctgtatgctgcttatgctcttcatctttatcttcagtatc
ctgggaatgcacatctttggttgtaagttcagtctgaagacagaggcaggagacacagtc
cctgacaggaagaactttgactccttgctctgggccattgtgacggtctttcagattctg
acgcaggaggactggaacatggtgctgtacaatgggatggcatccacctcgccctttgct
gctctctactttgtagctcttatgacatttggaaactatgtgctcttcaatttactggtg
gccatcttggttgagggtttccaggctgagggtgatgcaaaccgctcttactcggacgat
gacaggtcttcctgtaattttgaggagaatgataagcagaaggactctctgcatctctca
gacccaaagatctgtgcattaacccctaatgggcacctggacttgtccccactgccccat
ggactgtttccaggagaaaggttgacctttgctcttggttccaggaggagcagtgttatt
tctcttggcagggccaacttggagcagagggctatgtatccaggtcgaagttaccacaac
tggggtcgccctctgcctacccagcctcaggccttgtgggcccgtcgttccagctggaac
agcctggggggatgccgcccctgcgcctcctcttctccctccgctagtccagccttcacc
cccacctctgcaaggcccttctatggctatggcctggggggccttggcggagtagtcgga
ggaagccttcgtattcggggtccccgtgcctcttcatccccacaccgccaccaccatctt
gtccacccggatgaggaggagtctctcctctctgctcccgctgttgctccacgctctctt
caccttccccaccctatgctcccaggccactttgtacccagaagggaccgcagagctcta
tcactagagctgccccacctactgcaggtcccaggacccccgcaccctccactgccacca
caccacccgctgccctctattaccctccatgctcatcacaggaagaagagcttctctggg
gggatggtaattagtggtggagatggtggcggtgggcttgacggtctgggtggcttagga
ggggtacaccaagactgtaatgggaaaactcctctgtctcagcatcaccattcccatcat
agacaccacactgagcactctggaggggcaaacccccagagccaactgatggccgacgtc
ttcccccaggttaacacacgcagcaaggaccgggaggacctggacgatgacattgaatat
agcttgtgcttccgcatccagaagatgttagaagcgtacaaaccagactggtgtgagagc
agagaagactggtccgtcttcctattctccccacagaacaagttcagacagatatgccag
tccatcatagcccataagctgtttgactatgtggtgttggccttcatcttctccaactgc
attacagtagctctggagaggcccaagatactacagggcagcttggaaagagtctttctc
accatctccaactacatctttactgccatctttgtgagcgagatgacactcaaggtggtt
tccatgggtttgtatgtgggtgagcaggcttatctgcggagcagctggaacattctggat
ggcttcttggtttttgtgtctttgattgacattgtcgtgtccatggcgggtggggccaag
atccttggtgtgcttcgagtcctcaggctgctcagaacattgcgtcccctcagggtgatt
agcagagctccgggtctaaagctggtagtggagacactcatcacctccctcaaacccatt
ggcaacattgttctcatctgttgtgcattctttatcatctttggaattcttggggtccag
ctgtttaaaggcaagttcttctactgcttcggccctgatgtgaaaaacatcaccaacaag
tcggattgcctgcaagccagctacaaatgggtccaccataagtacaactttgacaacctg
ggacaggctctgatgtctctgtttgtgctcgcctctaaggacggctgggtcaacattatg
tatcatggcctggatgctgtggctgtggaccaacagccggtgaccaacaacaacccgtgg
atgctgctgtatttcatctccttcctcctcatcgtcagcttcttcgtcctcaacatgttt
gttggtgttgtggtggagaacttccacaagtgccgccagcatcaggaagtggaggaggcc
aaaaggcgcgaggagaagcgtcagcggcgcatggaaaagaagaggagaaaagcccagaag
ctgccctactttgccagctatggcaacatacgcctgatgatccacacactgtgcacaaac
cactacctggacctcatcatcaccttcatcatctgcatcaatgtcatcaccatgtcctta
gagcacttcaatcaacctcatcaaagacacagggataccagacgggtccaccaccatgaa
acttcctgttgtagcatgtgttggagtaacagcaatccatacaaaggagctgtgattgca
ctgctgatttga
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