Etheostoma spectabile (orangethroat darter): 116703438
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Entry
116703438 CDS
T08457
Symbol
grin2c
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04020
Calcium signaling pathway
esp04080
Neuroactive ligand-receptor interaction
esp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116703438 (grin2c)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116703438 (grin2c)
04082 Neuroactive ligand signaling
116703438 (grin2c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116703438 (grin2c)
Ion channels [BR:
esp04040
]
Ligand-gated channels
Glutamate (ionotropic)
116703438 (grin2c)
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Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
NMDAR2_C
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
116703438
NCBI-ProteinID:
XP_032394066
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All DBs
Position
15:19686686..19773472
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AA seq
1411 aa
AA seq
DB search
MGVRLGCLSDSPWWPPPPLLLLLLFCTVPFCSGRPFGIPTPSVNVAVVFSGSAYQTEIKG
RLSRENFMDLPLEVNPITVLVNNTNPRALLTRICDTLSTNRVHGVVFEDNVGSEAVAQIL
DFISTQTAVPIVGISGGSAVVLPYKGEGSNFLQLGSSIEQQINGMFKVMEEYNWDSFVVI
TSLYPGYETYVDYIKSFTDTSYFIWDLQDVLTFDMSADGMNDIRARRLLQQIDAQVLLVY
CSHEEAQYLFTMAAESGLVGPGYIWIIPSLAVGNPDILPPESFPVGLISIITDRWRMSLR
KRVRDGVAIVVKGVQSFKKERGFIPEGQSDCHNPVKPTATNDTLFRHMLNVTWEHNDFSF
NSNGYLVNPAMIIITLDRERQWDKVGTYEMGILQMRYPVWPRYGSYMEPVSDYRHLTVAT
LEERPFVIVEAVDPVTGTCVSNTVPCRRQSNRTEAIVGHTEPYTKLCCKGFCIDILKKLS
RTIKFSYDLYLVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIIDFSVPF
VETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYCSPVGYNRSL
VSAKDPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTAN
LAAFMIQEQYIDTVSGLSDKKFQKPQEQYPPFRFGTVPNGSTERNIRSNYPEMHSHMVKY
NQKGVEDALNSLKTAKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKD
SRWKRPIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYMLLVAM
GLSLLVFAWEHLLYWKLRHSVRKSEHLDFLLAISRGIYSCFNGVEQTDHNGSMQTSDVTT
NYTQANMLKMLQTAKDMVSSARVENSLDNATKTIESWSRRGGDNVRLGLPPRVTTTEITH
GRLPYISSITDNHSPYPQRALTPTFPIPYGDSSTQPLLDKPQVVTRPNPLRYTLPARNSQ
HVLERTLPISSLSSPHIAIRDPVPTSSNPHHSSRLYVENQARHPTSPFVPYRELQVPDIY
VEHKGPLRRKFSYPPDCVTRRRRSHSYVFDAANPRMRNDYDEPQSCLAELRANHLLNNHA
PVAAAMACNARHYPGGSASCNSCMKSYLEPEMEDVPLLGKDKLNRRASFLKATWGNDRIH
QVDETKPSTSSTRVDMPDLFPRVVVANPRPHKLYGSLGHNLSCYPLAAEPAYLDPAHMGS
YPYKQKLKYTESTRLPSYREAILQNAAALRRSSSTVVHRHYSTYLNSYTDLPVYVGPMAH
RPSQFYDSSKDMCHLFPCTSHCPDNAAMLPRMSDRQVVYHNNTFGSYDGTGNREDPGSGS
RERRQVLVARRVNSPYVPKPWGRVSSLESEV
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcgtctaggctgcttgagcgactccccgtggtggccgccgccgccgctgctg
ctgctgctgctgttctgcacagtccccttctgctcaggccggccctttgggattcccacg
ccctctgtgaacgtggcggtggtgttcagcggatcggcataccagacagagattaagggg
cggttaagtcgggaaaacttcatggacctgcctctggaggtgaaccccatcactgtgctg
gtcaacaacaccaacccacgggcattactcacccgcatctgtgacaccctgtctaccaac
cgtgtccatggagtggtgttcgaggacaatgttggctcggaggccgtggcacaaatcttg
gacttcatttccactcagacggcagtgcccattgtgggaattagtggaggctctgctgtt
gtcctgccatacaagggtgagggctccaacttccttcagctgggctcctccattgagcag
cagataaacggcatgttcaaggtgatggaggagtacaactgggacagttttgtggtcatt
accagtctctacccggggtacgaaacctacgtggattacattaagtctttcaccgacacc
agctacttcatatgggatctgcaggacgttctgactttcgacatgtccgccgacggcatg
aacgacattcgggcacgaaggttgctgcagcagatcgacgcacaggtgctgttggtctac
tgctcccatgaagaggctcagtacctgttcaccatggcagcggagtctggactggtgggg
ccgggctacatctggattatccctagccttgcagtggggaacccagacatcctcccacct
gaaagcttccctgtggggctcatcagcatcatcacggaccggtggaggatgagcctgaga
aagagggtgagggacggggtcgccatcgtggtgaaaggcgtgcagagctttaagaaagag
agaggcttcattcccgagggccagagtgactgccacaaccccgtcaagccaactgctact
aatgacactctgttcaggcacatgttgaatgtaacctgggaacacaatgacttctccttc
aacagcaacggttacctggtgaatccagccatgataattatcactttggacagagagcga
cagtgggacaaggtggggacctacgagatggggatcctgcaaatgagataccctgtgtgg
ccacggtatggctcctacatggagccggtgtcagattacaggcatctgacggtggccacg
ctggaggagaggccctttgtcattgtggaggcagtagaccctgtgactggtacatgcgtc
agcaacactgtgccctgccgacgacagtccaacaggacggaggctattgtaggtcacact
gagccatacactaaactgtgctgtaaaggcttctgcatagacatcctgaagaagttgtcc
cgcaccataaagttttcctacgatctctacctggtcaccaacggcaagcacggcaagctg
gtccgaggcatttggaatgggatgatcggagaggtgttctacaagcgggccgacatggcc
atcggctcgctgaccataaacgaagagcgatctgagattattgacttctcggtgccattt
gtggaaacggggatcagtgtgatggtggccagaagtaacgggactgtctcaccgtctgcc
tttttagaaccatacagtccggcggtttgggtgatgatgttcgtcatgtgtctgactgtc
gtggccatcacagtcttcgtctttgaatactgcagtccagttgggtacaaccgcagcctg
gtcagtgccaaagatcccggaggtccaaccttcactattgggaagtctgtgtggctgctg
tggggaattgtcttcaacaactcagtccccattgagaatccaaagggcaccaccagtaag
atcatggtcctggtctgggctttcttcgctgtcatcttcctggcttcctacacagccaat
ttggcagccttcatgatccaggagcaatacatcgacacggtctctggactgagtgacaaa
aagtttcagaagccacaggaacagtacccaccattccgctttggtacagtcccaaatggc
agcacagagcgcaacataaggagtaactaccctgagatgcactcccacatggtcaaatac
aaccagaagggagtagaggatgcccttaacagcctcaaaacagcgaaactggatgccttt
atctatgatgctgctgtgctgaattacatggctggcaaagacgagggctgcaagctggtg
accattggcagtgggaaggtgtttgccaccactggttatggcattgccctgcaaaaggat
tcacgatggaaacgacccatcgacctggcactgctccagttcctggctgacggtgacaca
caaaaactgcaaaccgtctggctcacaggcatctgccgtaatgagaagaaagaggtgatg
agcagtaagctggacattgacaacatggctggggtcttctacatgttgcttgtggccatg
ggcctgagcctgctggttttcgcttgggaacatctgctctactggaaattacgacattca
gtccgcaaatcagagcatctggactttctcctagccatcagtagaggcatctacagctgc
ttcaatggagtagagcaaacagaccacaatggcagtatgcagacttcggacgtcactacc
aactatacacaagccaatatgctaaagatgctgcagacagccaaggacatggtgtcctct
gccagagtggagaactccctagacaacgccaccaaaacaatagagagctggagcaggcga
gggggcgacaatgtgcggcttggcctgccacccagagtgacgaccacagaaatcactcac
ggccgtctgccctatatctccagcatcacagacaaccactcaccgtaccctcagagagca
ctcacacccacctttccaattccttatggggacagctctacccagccactcctggataag
cctcaagtggtgacccgacccaacccgctccgctacacgctgcccgcccgcaacagtcaa
catgtcttagagaggactctgcccatctccagcctcagcagtcctcacatcgctattcgg
gaccctgttcccaccagttctaacccccaccacagcagcaggctgtatgtggaaaaccag
gcccggcaccccacgtccccttttgttccttacagggagttacaagtgcccgatatctac
gtggaacacaaagggccgctgaggaggaagtttagctacccccctgactgtgtgacccgg
agaaggcgctcccatagctatgtgtttgatgctgcaaaccctagaatgagaaatgactat
gatgaacctcaatcctgccttgctgagttgagggccaatcaccttctgaacaaccacgcc
cctgttgctgctgccatggcctgcaatgcaagacactatccagggggaagtgcaagttgc
aactcctgtatgaagtcctatctggagcctgaaatggaagacgtaccactcttggggaag
gataaactcaaccgtcgcgcctcattcctcaaagccacgtggggcaacgacaggatccat
caggtagatgaaacaaagccctccacatcctccacccgcgtagacatgcctgacctgttc
cctcgggtggtagtggccaacccaaggccccacaagctatatggcagtcttgggcacaac
ctgtcctgctaccccttggctgctgagcctgcctacttggacccagcccacatgggctcc
tacccctacaagcaaaagctcaagtacacagagtccacccggctgccctcttacagggaa
gccatcctgcagaatgccgcagccctgcgtcgctcctcctcaacagtggtgcacagacac
tactccacttatttgaactcgtacacggacttaccagtgtatgttgggccaatggcccac
agaccgtcccagttctatgacagttctaaggacatgtgccacttgtttccctgtacaagc
cactgcccagataacgcagcaatgctgcctcgtatgagtgacaggcaggtggtttaccac
aacaatacgtttgggtcctacgatgggacaggaaacagggaagacccaggctctgggagc
agagagcgtaggcaggtgttggtggcgcgcagagtcaacagtccctatgtgccaaagccc
tgggggagggtatccagcctggagtctgaggtctga
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