Etheostoma spectabile (orangethroat darter): 116703589
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Entry
116703589 CDS
T08457
Name
(RefSeq) MHC class II regulatory factor RFX1-like isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116703589
Transcription factors [BR:
esp03000
]
Eukaryotic type
Other basic domains
RF-X
116703589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
116703589
NCBI-ProteinID:
XP_032394287
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All DBs
Position
15:6695315..6713841
Genome browser
AA seq
1009 aa
AA seq
DB search
MAMSNAKGGFPALVMATSGFIGEIQPAAQPQGAGVSVTPGQPDASSTPATAPQFLAEIQT
AVATPTVVTSTGQTTPTDQVTTITTPKLADGSLAQSTAQTQAPQTQYVTAEIQGSPSQSG
NAQSTPQYIVVTVTEGSLHSSDSVSDSSPPPAVVQTGVPTHVVQQVQTAQQRSVVQATSQ
IAKTEPGTQLSVTSLQPVHISQEFLPSTEVTALVRDNNLEECQLPDEIGQPECQAWASAD
YEREGCCKPLYLPLDVLQYYQSLYLLSVQEKEIGAHPAVTSSGPDKPPVQATTTTFQVQQ
QLTPVPVQHVYANQVQYVEGGETNYTTSTIRSSAFPYTDTPLYTQTTAAQYYEGQPTTGS
STPGTPLTVSVTAGTTGGVSMFVAQPTSASGGGATVVTTGGTTNGAGEGAGTNGGAAGSY
VIQGGYMLGSSGGAVGNSQNYSHTARASPATVSITEGEESSVPSADKKVQWLLDNYETAE
GVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLR
IKAGSSLLRLMEDQQHLAMRQQPFSQKQRLKPVHKVEGMTNGTAAAAGAGQQQGSGQVDI
STQVQQYQQFLDASRALPEFPDIDLQGKSLPEGIEVEHIKSFQLLYREHCEAILDVMVNL
QFTLVETLWKTFWRFSQSQAGDATLAVHDESEKRLPKSCLVLLCKYDPVLRWSRDCDNSL
YQGLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTNAMMNIPEEMVRIKVTSANAFAQT
LRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQD
FKLTLQQQNSLEQWAAWLDGVVSQVLKPYQQSPAFPKAAKLFLLKWSFYSSMVIRDLTLR
SAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMGEFASLGRSLNQLDPDKEEEE
EEEEESDEEGQELSLPSDGAVLGDESLEPPAKLARIDQRVLFTTGSADN
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgtcaaatgcaaaagggggattcccagctcttgtaatggccacctcgggcttc
ataggtgagatacagccagcagcccaaccccagggggctggtgttagcgtcacaccgggg
caacctgatgccagttctacccctgcaactgcccctcaatttctggctgagattcagact
gcggtggccacacccactgttgtcacatccacaggccaaactactcccactgatcaagtt
accactatcaccactccgaaactggcagatggtagtctagcccaatccacagcacagacc
caggctcctcaaacacagtatgtgactgcagagatccagggctccccctcgcagtctgga
aatgctcaaagcactcctcagtacattgttgttacagtcacagagggctcccttcactca
agtgacagtgtgtcggactctagcccccctccagctgtggtgcaaacaggagttcccaca
catgttgttcagcaggttcagacggctcaacagaggtctgttgtgcaggccacctctcaa
atagccaagactgagccaggcactcagctcagtgttaccagtctacagcctgttcatatc
agccaggagttcctccccagcaccgaggtgacagcgttagtcagggataacaatctagaa
gaatgccagctaccagatgagataggacagccagagtgccaggcctgggcatcagcagac
tacgaaagggaaggctgctgcaagcctctctacctcccattggacgtccttcagtattac
caatcactgtaccttctctctgtgcaagagaaagagataggagcccaccctgcagtcaca
agctcaggccccgataagccaccagtgcaggctacaactaccactttccaagttcagcag
cagctcacaccagtgccagtgcaacatgtgtacgccaatcaagtgcagtatgtggaagga
ggagagaccaactacaccaccagcacaatccgttccagcgcctttccttacactgacaca
cccttgtacacccagaccacagctgcccagtattatgaaggtcagccaactacaggctca
tccacccctggcacacctctaaccgtctctgtgactgctggcacaacagggggtgtgtcc
atgtttgttgcccagcctaccagtgcatcagggggcggggccacagtggtgaccacaggt
ggcaccaccaatggggcaggtgaaggtgctggcaccaatggtggcgcagcaggcagctat
gtgatccaggggggttacatgctaggcagcagcggaggggcagttggcaacagtcaaaac
tactcacacacagcccgcgcctccccagccactgtgagtattacagagggcgaggagagt
agcgtgccgtcggcagacaagaaggtacagtggttgctggacaactatgagacagctgaa
ggagtgagtctgccacgttccaccctctactgccactatttactgcactgccaggagcag
aaactagagcctgttaatgctgcctctttcgggaaactcattagatctgtgttcatgggg
ctacgcacacgacgcctgggcacacggggtaattccaaataccactactacgggctgagg
atcaaggcaggttcctctcttctccgtctgatggaagaccagcaacatctggccatgagg
caacagcccttctcacagaaacagaggttaaagcctgtgcataaagttgagggaatgacc
aatggcacagcagcagcagcaggagcaggccagcagcaggggtcagggcaggtggacatc
agcacccaggttcagcagtaccagcagttcctagatgcatcacgcgctctcccagagttt
ccagacatcgacctccaagggaagtctctgccagagggaattgaggtggagcacatcaag
agctttcagctgctgtacagagaacactgtgaggccatactagatgtgatggtcaacctg
cagtttactctggtggaaactctgtggaagaccttctggaggttcagtcaaagtcaggct
ggagatgccacattggctgttcatgatgagtcagaaaagcgcctcccgaagtcctgcctc
gtgttgctgtgcaagtatgatccggtgctgcgctggagccgggactgtgacaacagcctg
taccagggcctggtggaaattctcatccctgatgtcctcaggcccattcccagtgcctta
actcaagccatccgcaactttgccaagagcctggagagctggctgaccaatgccatgatg
aacatcccagaggaaatggtccgcatcaaggtaacatcagccaatgcatttgcccaaaca
ctgcgtcgctacaccagtctcaaccacctcgcccaggcagcccgtgccgtcctccagaac
acggcccagatcaaccagatgctctctgacctcaaccgcgtcgactttgctaacgtccag
gagcaggcttcatgggtgtgcaggtgtgaagaccgtgttgttcagcggctggagcaggat
ttcaagctgaccctccagcagcagaactccctggagcagtgggctgcctggctggatggt
gtagtctcccaggtcctaaagccctaccagcagagccctgccttcccaaaggccgccaag
ctcttcctactcaagtggtccttttacagttccatggtgatcagggacctgactctgagg
agtgcagccagttttggttcctttcatctgatccgcctgctgtacgatgagtacatgtac
tacctgatagagcacagagtggcccaggctaaaggagagacccccattgctgtcatggga
gagtttgccagtttaggccggagtctaaaccagctggatcccgacaaagaagaggaagag
gaagaggaagaggaaagtgatgaggaaggtcaggagctgtcccttccctcagacggggct
gtgctaggagacgagtctctggagccgcctgccaagctggccagaatagaccagagagtc
ctcttcacaaccggatcagctgacaactaa
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