Etheostoma spectabile (orangethroat darter): 116703605
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Entry
116703605 CDS
T08457
Symbol
ddx39a
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
esp03041
]
116703605 (ddx39a)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
116703605
NCBI-ProteinID:
XP_032394337
LinkDB
All DBs
Position
2:complement(18182859..18187900)
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AA seq
427 aa
AA seq
DB search
MAETDVDNELLDYEEDEEPQGAPESGTPANKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKVSVFFGGLAMKKDEDVLKKNCPHIVVGTPGRTLALIR
NKTLNVKNIKHFVLDECDRMLEQLDMRRDVQEIFRVTPHEKQVMMFSATLSKDVRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDEDDAKTLNDVQDRFEVNVAELPEEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaccgacgttgacaatgaacttttggactatgaggaggatgaggagccccag
ggagcccccgagagtgggaccccagcaaacaagaaggaagtgaaggggtcctacgtatct
attcacagctcaggcttcagagactttctcctcaaaccagagctgctccgtgccattgtc
gactgtggttttgagcatccctcagaagtccaacatgagtgtattccacaagctatccta
ggcatggacatcctgtgtcaggccaagtctggtatgggaaagacggcagtgtttgtactg
gctacgctgcaacagatagaacctgtggatggtcaggtgtctgtccttgtaatgtgccac
acgcgagagttggccttccagatcagcaaagagtatgagcgcttctcaaagtacatgccc
actgtaaaggtgtccgtgttctttggtggcctggccatgaagaaggacgaggacgtcctg
aagaagaactgccctcacattgttgtaggaactccaggacgtaccctggccctcattcgc
aacaagaccctcaatgtgaagaacatcaaacactttgtgcttgacgagtgcgataggatg
ctggagcagcttgatatgaggcgtgatgtccaggaaatcttcagggtgacaccccatgag
aaacaggttatgatgtttagtgcaacgctaagcaaagacgtccgccctgtctgccgcaag
ttcatgcaggatcccatggaagtgtttgtggatgatgagaccaagctgacactccatggc
ttacagcagtattactgcaagttgaaggacagcgagaaaaaccgaaagctctttgacctg
ctcgacgtcttagagttcaaccaggtggtcatctttgttaagtcagtgcaacgctgtgtg
gctctgtcccagctgctggtggagcagaacttccctgccatcgccatccacaggggcatg
gcgcaggaggagcggttatcccgataccagcaattcaaagactttcaacggcgaatcctg
gttgccaccaacctgtttggccgaggcatggacattgagcgagtcaacattgtcttcaac
tacgacatgccagaggattctgacacataccttcacagagttgcccgtgctggcaggttt
gggaccaaaggcctggctgtcacctttgtgtctgacgaggatgacgccaagaccctgaac
gatgtccaagaccgctttgaggtcaacgtagcggagctaccagaggagatcgatatctcc
tcctacattgaacagtcaagatga
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