Etheostoma spectabile (orangethroat darter): 116703877
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Entry
116703877 CDS
T08457
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116703877 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116703877 (herc3)
Enzymes [BR:
esp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116703877 (herc3)
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
HECT type E3
116703877 (herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
116703877
NCBI-ProteinID:
XP_032394775
LinkDB
All DBs
Position
2:complement(10110509..10133717)
Genome browser
AA seq
1043 aa
AA seq
DB search
MLCWGNAKDGQLGIAMERNPMFEPMNCHVFSGRGLKEIACGGQHSMFLLHDGSVYTCGSN
SCGQLGHNKPGTSPELVGALDTQTITMLSSGRAHSMAVNEQGQVFAWGAGEGGQLGLGTA
EEAVRIPRLVRRLCDHRISQVMCGNQHCVALSRDGQLFTWGQNSSGQLGLGKGEPSRLLP
YPLKSLAGIPFAQITTGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRS
QKVVHISCGEEHTAALTKDGGLFTFGEGSWGQLGHGSTNNELLPRRVVELMGSEVSQITC
GRHHTLAFVPSSGVVYAFGCNSHGQLGTGMRGDAKSPLPVKASFLTGNVHSTVTKIISGG
DHSFLLYSNDQSYVPPEDFRVINVSKSISPINYERLNSWRLKLMYSTDSNVTKDIIIQLS
STACWNGSFLDQSDDTHFKTNPKIPGIDLDSVRKLFETLSKPAFSGLLEQATKSFESMMI
PQLPRSPPDVEAMRIYLILSEYPALMDSKNYIRLTIPLAMAILRLDANPGKVLDNWWCLL
DNSVFTRMVDMYKSIVVFMLTGGKALLVPVFYENYLVATLRLLEKLHQVNLRANHVEYNH
FYIPDITSLVDIQEDYLKWFLSKADIKAGSTPRSQSDLPAVNLCAYPFILNAQAKTTMLQ
TDAELQMQMAVSGANLHNVFMLLTLEPHLARNPYLVLHVRRDHLVSDTLRELTMYSDVDL
KKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLDPVYGMFSYYKESNLLWFSDKCFVEQNW
FHLIGIICGLAIYNSTVVDLHFPLVLYKKLLDVPSTLEDFKELSPTEARSLQQLLDYEGG
DVEETFLLNFAITRENYGLTEVKELIPGGESISVDKNXRKEFVEAYLRYVFLDSVSEQYS
AFSSGFLKVCGGDILSLFQPSELMAMVVGNNNYNWEEMEKNAVYKGEYTATHPTVRLFWE
VFHEFPLEKKKQFLLFLTGSDRIPIHGMESLRIVIQSTTAEEHYLPVAHTCYNLLDMPRY
QTKEILCRRLTRAVEQYEGFSLV
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgttgggggaatgcaaaggatggacagttgggtattgctatggagaggaacccc
atgtttgagccaatgaactgtcatgtgttcagtggcaggggactgaaagagatagcctgt
ggagggcaacactcaatgttcctgctgcatgatggtagtgtgtacacatgtggttctaac
agctgtggacaactgggccacaacaaaccagggacttccccagagcttgtaggagctctg
gatactcagacgataacgatgttgtcgagtggtcgggcccattcgatggctgtgaatgaa
cagggtcaagtgtttgcgtggggagctggtgaagggggccagcttggtctggggactgca
gaggaggctgttcgaatcccaaggttggttagaaggctgtgtgaccaccggatctctcaa
gtaatgtgtgggaatcagcactgcgttgcactttctagagatggccagctgttcacatgg
ggtcagaacagcagcggtcagctcggtctggggaaaggagagcccagcaggctgctgcct
tatcccctgaagtctctggctggtattccctttgcacagataaccaccgggggagaccac
agctttgctctctctttgtccggagctgtatttggttggggcaagaacagagctggacaa
ctgggtctcaatgataaacaagaccgtgctgttccgtgccacatcaaatttttgagatct
caaaaagttgttcatatcagctgtggagaggaacatacagcagccctcacaaaggatggt
ggcttgtttacatttggtgaaggctcatggggtcagctgggtcatggctccaccaataat
gaacttttacccagacgagtggtggagctcatgggctctgaggtgtcccagatcacctgt
ggcaggcaccacacgttggcctttgtgccttcctctggcgtggtgtatgcatttggttgt
aacagccatggccaactaggcacaggaatgcggggggatgctaagagcccattacctgtc
aaggccagtttcctgactggaaatgtccattctacagtgaccaaaatcatcagtggagga
gaccatagcttcttattgtactctaatgatcagagttatgtccccccagaagacttcaga
gtgattaatgtcagtaaatcaatctccccaatcaattatgaaagattaaattcatggcgg
ttaaagctgatgtacagcacagattccaatgtcacaaaagacatcataattcaactctcc
tctacggcttgttggaacggcagctttttggatcaaagtgatgatacccacttcaaaacc
aacccaaagatcccaggcatcgatctcgactctgtcagaaagctatttgagacgctaagc
aaaccagctttctctggacttctggagcaggccactaagagttttgagagtatgatgatc
cctcagctgccacgctcccctcctgatgtcgaggccatgaggatttacctcatcttgtct
gagtatccggccctgatggactccaaaaactacatccgcctcactatcccgctggcaatg
gccattctccgcctagacgccaaccccggcaaagtattggataactggtggtgtttattg
gacaacagcgtgttcaccagaatggtcgacatgtacaagagcatcgttgtgttcatgcta
acaggaggcaaggcgctgctcgtaccggtgttctacgagaactatttagttgccacgcta
aggctgctggagaaactccaccaggtaaatttaagggccaaccatgtggagtacaaccat
ttttatatccctgacatcaccagcctggtggacatccaggaagactacctcaaatggttt
ctgagtaaagctgacattaaagcgggatcaaccccccgttcacagagtgaccttcccgca
gtgaacctatgtgcctacccgttcatactgaacgctcaagccaagacaactatgctgcaa
acagatgctgaactgcaaatgcagatggcagtaagtggtgcaaacttacacaacgtcttt
atgctgctcacactggaaccccaccttgctaggaacccttacttggtgctccatgtgcgc
agggaccatttagtaagtgacacactacgtgagctcaccatgtactcagatgtggacctc
aagaaaccgctcaaggtgatctttgatggtgaggaggctgtggatgcaggtggagtaact
aaagagttcttcctgctgctgttaaaggagctgttggatcctgtatatgggatgttcagt
tattacaaagagtccaacctgctgtggttctcagacaaatgttttgttgagcagaactgg
tttcacctgatcgggatcatctgtggtctggccatctacaactccacagtggtggacctc
cacttcccactcgttctctacaagaagctgctcgatgtgccatcaacgctggaggacttc
aaggagctctcccccaccgaggccaggagtctacaacaacttctggattatgaaggaggt
gatgtggaggagacgtttcttctcaactttgctatcaccagagagaactacgggttgaca
gaagtcaaggagctcattcctggaggagagagcatcagtgtggacaaaaacancaggaag
gagtttgtggaagcctacctgcgctacgtgttcttagactcggtgagcgagcagtactca
gccttctcctctggcttcctgaaggtgtgcgggggggatatcctgtcgctgttccagccc
tctgagctgatggccatggtggtcggcaacaacaactacaactgggaggagatggaaaag
aatgctgtttacaaaggggaatacacagccactcatccaacagtcagattgttctgggag
gttttccacgagttccctctggagaagaaaaagcagttcttattgttcctgaccggcagc
gaccgtatccccatccacggcatggagagcctgcgtatcgtcatccagtccaccacagcg
gaggagcattacctgccggtggcccacacctgctacaacctgctggacatgccccgctac
cagaccaaagagatcctgtgtcgccgtctcactcgggctgtggagcagtacgagggcttc
agcctggtctga
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