Etheostoma spectabile (orangethroat darter): 116704054
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Entry
116704054 CDS
T08457
Symbol
skp2
Name
(RefSeq) S-phase kinase-associated protein 2 isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04068
FoxO signaling pathway
esp04110
Cell cycle
esp04120
Ubiquitin mediated proteolysis
esp04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116704054 (skp2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
116704054 (skp2)
04150 mTOR signaling pathway
116704054 (skp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116704054 (skp2)
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
116704054 (skp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_R13L1-DRL21
LRR_NXF1-5
LRR_9
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
116704054
NCBI-ProteinID:
XP_032395142
LinkDB
All DBs
Position
16:complement(23699964..23709501)
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AA seq
429 aa
AA seq
DB search
MPKHSMPLQDLPCLSLQGSMLSQSENNNKRKSKGCLSEGLDVECTPTELIQQWSPSHKHQ
RLICKGKENDSNRFVLARRSRRKKESTTSGLSWDHLPDELLLRILCYIPLQDLLRMTVVC
KRWHRLAFDESLWHSVDLEGLTHTGSALQQVLKTGVRMLRCPRSFVEELDFTDIGRLQLV
RVDLSSSIIPTSSLERIICECRLLEYLSLEGLQLSDTILSALSKNPNLLQLNLSGCSGFS
GPALADMLKSLVSIEQLNISWCEFNNNHVKSVVNNLSPTATHLNLSGYRENLLLDDVKVL
VTRCPYIQTLDLSDSTLLMADCFPVLKHLTGLVHLSLSRCYHIHLAALTDLGKTFPTLRL
LDVFGIVNGSHLSSLKKELPLVGINTLPFSSTARPTPAARPADRSMWNTRCRLRVRLSAP
HLHVQPAVR
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacacagcatgccactgcaggatctgccctgcctgagtctccagggctccatg
ttgtctcagtccgagaacaacaacaaacgcaagtccaaaggctgcctcagtgagggcctg
gacgtcgagtgcactccaacagagctcatccagcagtggtcaccaagccacaagcaccag
cggctcatctgcaaggggaaagagaatgacagcaaccggtttgtcctggccagaagatca
aggaggaaaaaagaatccacgacatcaggcctttcatgggaccaccttcccgatgagctg
cttctcaggatactgtgctacattcctctgcaggacctcctcaggatgacggtggtttgc
aagcgctggcatcgcttagcgtttgatgagtctctgtggcacagcgtggatctggagggg
ttgacccatacgggctcagccctgcagcaggtactgaagaccggagtccgcatgctgcgc
tgccctcggtccttcgtggaagagctggacttcacagacataggccgtctgcagttggtt
cgggtggatctgtccagctccatcatccccacctcgtctctggagaggatcatctgtgag
tgccggctgctggagtatctgagcctggagggcctgcagctctcagacacaatcctcagc
gctctgtctaagaacccaaaccttctgcagctcaacctaagcggctgctccggcttctct
ggtcccgcgctggccgacatgctcaagtccctagtcagtatagagcagttgaacatatca
tggtgtgaattcaacaataatcatgtgaagagtgttgttaataatctgagccccactgct
acccacctcaacctcagcggataccgagagaacctcctgctagacgatgtgaaggtgctg
gtgacgaggtgcccctatattcaaacgctagatttaagcgacagcaccctgctgatggcc
gactgcttccccgtcctcaaacacctgacgggcctggtgcatctctccctgagtcgctgc
taccacatccacctcgccgctctcactgacctgggtaagacgttcccgacgctgcgcctg
ctcgacgtgttcggcatcgtgaacggcagccacctgtcctctctgaagaaggagctgccc
ctcgtcggcatcaacacgctgccgttctccagcaccgcccggcccacgcccgccgccagg
cccgccgaccgctccatgtggaacaccaggtgtcgcctgagggtccgactgtcggcgcca
cacctccacgtccagcccgctgtgcggtga
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