Etheostoma spectabile (orangethroat darter): 116704138
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Entry
116704138 CDS
T08457
Symbol
pum3
Name
(RefSeq) pumilio homolog 3 isoform X1
KO
K14844
pumilio homology domain family member 6
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116704138 (pum3)
03009 Ribosome biogenesis [BR:
esp03009
]
116704138 (pum3)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
116704138 (pum3)
Ribosome biogenesis [BR:
esp03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
116704138 (pum3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF_NOP9
PUF
Bmt2
Motif
Other DBs
NCBI-GeneID:
116704138
NCBI-ProteinID:
XP_032395291
LinkDB
All DBs
Position
16:21747928..21762083
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AA seq
666 aa
AA seq
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MGRACVPDRMEAKSKKNFPPKSGKKFTQKGKDSIGTKLGGKPGGKPGGKKPFKSYNNAER
KGRPEKGGDGGKRGQKFAFSKDGDSPKKRKMPFKGKNTEEEGGGPVAKKMKKGEFKPKTE
LTEEELKKNRQQRKKDLKSSRQQAERKDMFQIICQCKRVWGDLRRKKCENDLKQKLMKEL
HDLIRGKMKQMAFAHDSVRVLQCFIQFGSHEQRQEVFKELKDDIIDLCKSQYGKHVVKKL
LFYGNKELVAAVMQTFKGHVRPMLRHAAASSIIEYAYNDKAVLAQRLMLTEGLYGNTFTV
CKSTVCNTIEKVAEANPDKLKNIIDEMKQILTPMAQKEQVIKHSLVHKVFLDFFLFAPDK
PRTEMIESIREAVVYMAHTHDGARVAMHCLWHGTAKDRKVIIKTMKTYMVKFATGEFGHL
VLLAMFDCVDDTKLVKQAVLSEILSSLDEVIGNKYGKKVLLYLLSPRDPAHLLPEIIKVL
EQGDGNTHSKKDMALRRKELLEVVSPPLLDHLRDNAAAMVMDKASCVTVSDILASACGDL
RPAMTAVAQLANQELVPGGIKGQLHMAEHPAGHLVLKWLIEQDMTLAEAGKEERFSRILV
DTVGTDKLKSWAKVNRGAMVLCNLLNSCDKAAAAEVKAALESIKSELSSFSSSNKGAEIL
LENLNK
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgggacgagcgtgtgtacctgatagaatggaggctaaatccaaaaaaaactttccccct
aaaagtggaaagaagtttacacagaaaggaaaagattccatagggaccaaacttggtgga
aaaccaggcggtaagccaggtggtaaaaagcccttcaaatcgtacaacaacgcagagagg
aagggcagaccggagaagggcggagatggcggcaagcggggacagaagtttgctttctcc
aaagacggggacagcccgaagaagaggaaaatgccatttaaagggaaaaatacagaagaa
gaaggtggaggtccggtggctaagaaaatgaagaaaggggagttcaagccaaagacggag
ctgacggaggaggagctgaagaagaacaggcagcagaggaagaaggatctgaagagcagc
agacagcaggcagagaggaaggacatgtttcagatcatctgtcagtgcaaacgtgtgtgg
ggagaccttaggagaaagaaatgcgaaaacgacctgaagcagaaactgatgaaggagctt
catgatctgattcgcgggaagatgaaacagatggcgtttgctcacgactcggtgcgcgtg
ctgcagtgtttcatccagttcggcagccacgagcagagacaggaagtgttcaaggagctc
aaagatgacatcatcgatctgtgtaagtcgcagtacggcaaacacgtggtgaaaaaattg
ctgttctacgggaataaggagctggtggcagcggtgatgcaaacatttaaaggccacgtg
cggccgatgcttcgccacgccgccgcctcgtccatcatcgagtacgcgtacaacgacaaa
gctgtgctcgcacagagactcatgctcactgaggggctgtacgggaacaccttcactgtc
tgcaagtccacggtgtgtaacaccatcgaaaaagttgcagaggcgaacccggacaagctg
aaaaacatcatcgacgagatgaagcagattctcacacccatggcccagaaagagcaggtg
atcaaacactctctggtccacaaagtcttcctggacttcttcctgtttgcgccggacaaa
ccgagaacggagatgattgaatccatcagggaggcggttgtctacatggctcacacacac
gacggagctcgagtggcaatgcactgtctgtggcacgggacggccaaggacagaaaggtc
ataattaaaaccatgaagacctacatggtgaagtttgccacgggagagtttggtcacctg
gttcttctggccatgttcgactgtgtggacgacaccaagctggtcaaacaggccgtgctc
tcagagatcttgtcgtctctggatgaggtcatcggcaataaatacggtaagaaggtgttg
ctgtacctgctgagccccagagaccctgctcacctattgcccgagatcatcaaggtgctg
gagcaaggagacggaaacacacacagcaaaaaggacatggcacttcggaggaaggagctg
ctggaagttgtctcccccccactgctagaccatctccgtgacaatgctgccgccatggtg
atggacaaggcgtcctgcgtcaccgttagtgacatcctggcatcggcctgtggggacctg
cggcccgccatgacggccgtggctcagctggccaaccaggagttggtgccaggagggatc
aaaggacagcttcacatggcggagcatccagcaggacacctggtgctgaaatggctcatc
gagcaggacatgacgctggcagaggccggcaaggaagagcggttcagcagaatcctggtg
gacaccgtgggaacagacaaactgaagagctgggccaaagtcaacagaggagccatggtg
ctctgcaacctcctgaacagctgtgacaaggctgcggcagccgaggtgaaggcggcgctg
gagtccatcaaatcggagctcagcagcttcagcagcagcaacaaaggagcggaaatcctg
ctggagaatctgaacaagtag
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