Etheostoma spectabile (orangethroat darter): 116704217
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Entry
116704217 CDS
T08457
Symbol
bdp1
Name
(RefSeq) transcription factor TFIIIB component B'' homolog isoform X1
KO
K15198
transcription factor TFIIIB component B''
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116704217 (bdp1)
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
116704217 (bdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
116704217
NCBI-ProteinID:
XP_032395393
LinkDB
All DBs
Position
16:complement(12252145..12269263)
Genome browser
AA seq
2804 aa
AA seq
DB search
MFRRSRFSIRPNVVTAGRTAAASQEAPSTNQEASETPKDVSESSTTTTTTTAVVTDNKSV
VTPSEKPAPPGDGNDQNGEGTSSSAAVQRRKRFSIKPKVAPGRPTPLARTPKSPFKAVSE
TPIEIPASDLDKPTKSTQSGTIASPQRLLSPRRRRPSEESKQPKTQPKPIIPPSDSSEHS
AVPNKDFLEQIHLPTDSGKELESNSGSQVEEVPSRLPNKVPPSLPDKEAIAISEKAKNLV
SSKTGLSLSQPAFSLSRLLNDPSDLQRIAKAQKLRELLKQEMHKEKKIKRAKARVKEYTL
DPAKMTMRDLIRYLPLSNPMTSSLEDATQENETVVPPSPVREDSPERAQEPVVLPKIASP
REEADEEAAATAEAEEEEEQDDAIMVPQVKVAEDGTLIIDEESLTVEVQRAKGPNPAQDR
DPIFERGSTTTYSSFRKGTYSKPWSSEETDMFFLAISMVGTDFSMICQLFPLRARSEIKN
KFKKEERENAWRIDKAFRERRKLDIEYFSKLLEKILEVQKTRKKLKSLAVKKSPKKKENK
KTKGKKASRKLSVVEEGDEEEQNEISDFGEEGEKENEDLCNEGGTTVAKPQKKRKRKNKQ
DASTKEPNDKKNKTSENEHDEAYIPGDTEAALPEDCPKLDTSEKIDNVSESKDNTIKPAK
LSRGRAPKPLLPLGRKWGKQPPPPSTKTNDAASDKEDESEIDGASKEQVNEDPLPLKQAT
KRKSASDDIYSGEEDVTVQPPRPTRYGRVPKPTKPLNIPGIEATHSSETTPASPAGSTAP
ARPRPKCTAKRGSSSKLQSAQESKKPKLVTLRASQSEYSDEEDEKQREEEEVEEEHPACS
SSNDSTAPAFVPASLRSPHPVISEVEETMEELDILANMPDVLGISQDVLCPDAFCERAQN
EIGTAETCEHQLDLLIDVIDFLSIENTEVSEDKSYNEAAQTLLTIGNMAHLSQSAQNQLA
TQDDIQGTTPVSVNETSQHLEEEMACCSKPAAQEENSATLMSGTSVPGGPETVTTVELEN
CTTDTDAIPVIKSSDQRTGSHMDPTPQLNLSQESSKTNSPQIRTGCLTKVKPKPNLGQSL
RTVQSKSQPETSVERTLEESHTVAPDLFQATEILSAAEEIPKIADCSKNVLNIEISNIEV
KHIEKTFGSQKRSVGHVKSGAAKSDQSASETHNDDFSEVQLEPSLGQTTRESRSTSASTD
EVMISHVGTTEISCNSQVTSNSAVTFKECSDNSAPVGVLPVSQKEESEVPSTSQTRKSRI
QKVKPKLNLAQTSRTVRSKPQTTKDIVKDSTPTPNLKFTEKTRAEVEAEPSCVTSSEKTS
LSPCPASTLTPSSDLGTTFTPTEELSTTEEKKTDVGVVGQVELGTTTLYLSDSENKNLSE
VQFEPRREQATRDTMLTSESIDEALMSHVGTTESSCNNPLTSDSAVTESQIGQVLNIVSA
PVQASIDYPASYVTPVEDLPVSLKEDRQVASTSQTKKSRFQKVKPNLNLAQTSRAVRSKL
QKTKGIGEKDSSPTPKIIAKYEAEQTCITSREKPSQSPCTASDLKPLLDLGTTFIPTEEL
STTDAKKSDAGVVGQLKSGATTSHQSTSENQNLSKAHFEPSTEQATRDSTQTMESKDEKR
MSYFGTTESSCNNLLTSDLAVTESQVGQGSNIVSAPDQESNNHAAPCVTPVEELPVSQKE
KSKVVSTCQTTRGLLQKVKPVVSQTSRTVRSKAQTTKDPFTLLQLPEICSSPTLSSESTD
KTKADVEVQPTCSTTPPEKPSQLKNSVSLLVSVPSLESCSTHKSTEELCSTEAQKIDVGC
RQDSKSEGLEQNVPQRRRRFPKVKHKPNLGSSSRATFTKPLLKDVSKPSEQCHMDTSLTF
EQQPEDNNNAQTELELTKTDSPTSTHCSLHTEPLSSTMLVPAKSEKSLDSTNYKGTSSDS
VVTATSWIAENPSVLTDSVLTQSSEKATVEGESTGDKTSNNDMVAGPASHWDCKQGMSIR
ATNTQPNDDPAAVTDVHTSGDGLTESKIEFKPPTSTQSSSDPKITTKQPRSENVSEAQSQ
DAVQHCSETTETNQTAAQRIDDNQSVPTDCHIRKAPQTCRGRLIKPKPNLGRSSRPPPQP
QQIQKTKQAETDFGALVCHKLVSERQPDIQEPVERAIEQCSNQNPSPSDAGSLLGSTQVI
EQLSQHDPPPNVAESSLGCLTQLLDNFTPDASTSSTGGTKSHPSLNTVFPDMLLQQKPLD
ADEPFFILSLTEIPVGSLGEAVDSVPESLPYLPVTDVSVGQQSVSGESLAAAGNGLLSNV
AVFMEESGETGLIKAIDIGPDPAANIGSIMENPVDPHDNITVHASELPETVENNDGTEMP
PAKQRLMDTCRRRAKLQVKPNTTKRKQASKTLAAKEAELIPIYPKPTGHSGPSVQPKVFY
DDVTEPQKGSDDPMDGEKETLRGGEDPEDSSSGAQISRTRRSSSRNRRAEGSLFLPSETS
NAAPASGETLSTSSTTSPTQTEVDADQTCELSPLCSDTTPNTSLYPAEVSASQQSVESSS
MEEEPTSVSQYFLSDIFTEVTAEKNDETEIPPAAQTEMDAHRREPAKLQVKPNTTKRKQA
MKTLTAKEAELIPIHPKPTGHSGLAGLTVQPKVFDDNVTEPQKGSDDHMDVEKETLTGGE
DPEDSSSGAQTTRSSSRNRKAKGSLSLPSKTNNAAPASDSPPGKEAPKGRKVKTPRAAGK
PSTPVTGVSTSYDVTPTFSPTQPTQEAHLTSSTTSPTQTEVDNDQTCELSPLCSDTTPST
SLYPAEVRKVSASQQSVESSSMEEEPTSVSQYFLSDIFTEVEEG
NT seq
8415 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgccggtcaagatttagtattcggcctaatgttgttacggcagggagaacagca
gcagcgtctcaggaagccccttcaacaaatcaggaggccagtgagacccccaaagatgtc
agtgagagcagcactactactacaactactactgctgttgtgacagataacaagtctgtt
gtgaccccatcagaaaaacctgcacccccaggggatggtaatgaccaaaatggagaaggt
accagctcctcagcagcagtccagagaagaaagcggttttccattaagcctaaagtggcc
ccaggtcgccccaccccccttgctcgaactccaaaatcccctttcaaggcagtctctgaa
actcctattgaaatccctgcctcagaccttgacaaaccaactaagtccacccaatctggg
actatagcatcccctcagagactcctgtccccaaggcgacggaggccttcagaagagagc
aagcaacccaaaacgcaacctaaacccatcatccccccttctgacagttcagaacattca
gctgttcctaataaggactttctagagcaaatccatctaccgacagacagtggcaaagaa
ttggaaagcaattcaggcagtcaagttgaagaagttccttcaagactaccaaataaagtc
cccccctctctcccagacaaagaagctattgcgatatcggagaaagccaagaatctagtg
tcatctaagactggcctctcactgtcacaaccagcgttctccttgagtagactcctgaat
gacccatcagacttacaaagaatagcaaaggcccaaaaactcagagagttgcttaaacag
gagatgcacaaagaaaagaaaatcaagagggctaaggcacgtgtaaaggaatatacccta
gatcctgccaaaatgaccatgagggaccttatccgttatctaccgctgtctaaccccatg
acatctagtttagaagacgcaactcaagagaatgaaacggtggtcccaccttctccagta
agagaagattccccagaaagagcacaggaacctgtggtcctccctaaaatagcaagcccg
agggaggaggcagacgaagaggcagctgcaactgcagaagcagaggaagaagaagagcag
gatgacgccataatggttcctcaggtcaaagtagcagaagatggcacactgatcattgat
gaagaaagcttgacagtggaagtccagcgagccaaagggccaaacccagcacaggatcga
gaccccatctttgaacgtggctccactacaacttactcgagcttcaggaaggggacctat
tcgaagccgtggtccagtgaagagacagacatgttcttcttggcaattagcatggtgggg
acagacttttccatgatttgtcaactgtttccactcagagctcgatcagagataaagaac
aaatttaaaaaagaagagcgagagaatgcctggagaattgataaagctttcagagagagg
cggaaactggacatagagtatttttctaagctgctagagaagattctggaagttcaaaaa
acccggaaaaaactaaagtcactcgctgtgaagaagtctcccaagaagaaagaaaataaa
aagacaaaaggcaaaaaagcttcaaggaagctgagtgttgtggaggagggagatgaggaa
gagcagaatgaaatttctgactttggggaggagggagagaaagagaatgaggacctctgt
aatgaaggaggaaccactgttgctaaacctcagaagaaacgtaaaagaaagaataaacag
gatgcttcaactaaggaaccaaatgacaagaaaaacaaaacgagtgaaaatgaacacgat
gaggcctacatacctggagacactgaggcagcacttcctgaggactgtccaaaattagac
acgtctgaaaagattgacaatgtgagtgagtccaaggacaacaccatcaagccagctaaa
ctctctcgaggcagggcaccaaaaccactactacctttgggccggaagtggggtaagcag
cccccaccaccctccacaaagaccaatgatgcggcatcagacaaagaggatgagagtgag
attgatggggcctctaaagagcaggtaaatgaagatccattacccttaaagcaagccact
aagaggaagtcagccagtgatgacatttactctggtgaggaggatgtcaccgttcaaccg
ccgagacctaccaggtacgggagagtgcctaaacccaccaagcccttgaatatccctggg
atagaggctacacactcgtctgaaaccactcctgcctcaccagctgggtccactgctcct
gccaggcctagacccaaatgcacagctaagaggggaagctcatcaaagctacaatcagcc
caagagtccaaaaagcctaaactagtcaccctaagggcttctcagtcagaatacagtgat
gaagaggatgaaaagcagagagaagaggaagaggtggaggaggagcaccctgcatgtagc
tccagtaatgacagcactgcccctgcatttgtgcctgccagcctgcgctccccacatcct
gtgatttcggaagtggaagaaacaatggaggagcttgatatcttggccaatatgcctgat
gtgttgggcatctcccaagatgtactgtgccctgatgccttttgcgagcgggcacagaat
gagataggcacagctgaaacctgtgaacatcagctggatctgcttattgatgttatcgac
ttcctttctatagaaaacactgaagtatctgaggacaagagctacaacgaggctgctcaa
accctgttgaccattggcaacatggctcacctctctcagtcagcacagaatcaactagcc
actcaagatgacatacaagggacaacaccagtcagtgtgaatgaaaccagccaacacctg
gaagaagagatggcctgctgctcaaagcctgctgcacaggaggaaaacagtgccactctt
atgtctggaacttctgttcctggaggcccagaaactgttaccactgtggagctagaaaac
tgcacaacagacactgatgccatccctgttattaaatccagtgatcagaggacaggttct
catatggaccctacccctcaattgaacttaagtcaagagagctcaaagacaaattctcca
cagatcagaacaggatgcttaaccaaggtcaaaccaaaacctaacctaggccaatcctta
aggactgttcagtcaaaatcccaaccagagacttcagtagaaaggacacttgaagagagc
cacacagtagctcctgacctttttcaagccactgagatactatcagctgcagaggaaatt
cctaaaatagcagactgtagtaaaaatgtgttaaatattgaaatttctaatattgaagtc
aaacatatagaaaaaacatttggcagtcaaaagaggtctgttggtcatgtaaaatctggt
gcagcaaaatcagatcaaagtgcctcagagacccataatgacgacttttctgaagtccag
cttgaacccagtttgggacagaccaccagagaatccaggtcaacatctgcatctacagat
gaagtaatgatttctcatgttggaacaactgagattagctgtaatagtcaggtgacatcc
aactcagctgtcacattcaaagagtgcagtgacaattctgcaccggtaggagtgttacct
gtcagtcagaaagaagagagtgaagtcccatctactagccagacaaggaagagtcgaatc
cagaaagtcaaacccaaactcaacctagcgcagacatcaaggaccgtacgctctaaacct
caaactacaaaagacatcgttaaagactccactccaactccaaacctcaaattcactgaa
aaaacaagagcagaggttgaagcagagccatcttgcgtcacctcttcagaaaaaacaagt
ctaagtccctgtcctgcttcaactttaacaccgtcgtcggatttagggactacttttaca
cccacagaggaactgtctacaactgaggagaaaaagacagatgttggagttgttggtcag
gtagaattgggcacaacaacattatatttgagtgactcagaaaacaagaacctctcggaa
gtccagtttgaacccaggagggaacaggccaccagagacacaatgctaacatctgagtcc
atagatgaagcactgatgtctcatgttgggacaactgaaagtagttgtaataatccgctg
acatccgactccgcagtcacagaatcccagattggacaagtgttaaacatagtctctgca
ccagtccaagcaagcattgactatcctgcttcatatgttacacctgtagaagatttacct
gtcagtctgaaagaagatagacaagttgcatctactagccagaccaaaaagagtcgattc
cagaaagtaaaacccaatctcaacctagcacagacttcaagggccgtacgttctaaactt
caaaaaacaaaaggcattggagagaaagactccagcccaactccaaaaataatagcaaag
tatgaagcagagcagacttgcatcacctctcgtgaaaaaccaagtcaaagtccctgtact
gcttcagatttgaaaccattgttggatttagggactacttttatacccacagaggaactg
tctacaactgatgcaaaaaagagtgacgctggagttgttggtcagttaaaatcgggtgca
acaacatcacatcagagtacctcagaaaaccaaaacctttctaaagcccattttgaaccc
agtacggaacaggccactagagattcaacgcaaacgatggagtccaaagatgaaaaacgt
atgtcttattttgggacaactgagagtagctgcaataatctgctgacatctgacttggca
gtcacagaatcacaagttggacaagggtcaaatatagtctctgcccctgaccaagagagc
aacaaccatgctgctccatgtgttacacctgtagaagagttacctgtcagtcagaaagaa
aagagtaaagtcgtatctacttgccagactacaagaggcctattacaaaaagtcaaacca
gtcgtatcacagacatcaagaactgtgcggtcaaaggctcaaaccacaaaagaccctttc
actctcttgcaacttccggagatatgctcgagccctactttatcatctgaatcaactgac
aagacaaaagcagacgtagaagtgcaaccaacttgcagtaccacccctcctgaaaagcca
agccagcttaaaaatagtgtttctctcttagtgtcagtaccatcattggaatcatgttct
actcataaaagcacagaggaattatgttcaactgaggcgcaaaagatagatgttggatgc
agacaagactcaaagtcagagggcttagaacaaaatgttcctcaaagaaggcgacgcttt
ccaaaggtcaaacacaaacccaatttaggatcctcctctcgagctacgttcacaaaaccg
ctgttaaaagatgtcagtaaaccctcagaacagtgccatatggacacgtctttaaccttt
gaacaacagcccgaggacaataacaatgcacaaacagaactggaactcacaaagacagac
agcccgacatcaacacattgttcattacatacagaacctctcagctcaacaatgttggta
cctgccaagtcagagaagtcactagacagcacaaattataagggtacgtcctctgatagc
gttgtcacagcaacatcttggattgctgagaatccgtctgtgttgacagactcagttctg
actcaaagtagtgaaaaagccacagttgaaggggaatccacaggggacaaaacgtcaaat
aatgacatggtggccggacctgcttcacattgggactgcaaacagggcatgtccattaga
gctacaaatacccaaccaaacgatgatccagctgccgttacagatgtccatacttcagga
gatggtttaaccgagtcaaaaattgaatttaaacccccgactagcacacagtcctcatca
gatccaaaaataaccactaagcagccacgttcagagaatgtctctgaggctcaaagtcaa
gatgcagtccaacattgttctgaaaccactgaaactaatcaaacagctgcccaacggatt
gatgataatcagtcagtgccaactgactgtcacataagaaaagctccccagacttgtaga
ggccgacttattaaaccaaaaccgaacctgggacgcagcagccgaccccccccacaacct
caacaaatccagaaaacaaaacaagcagaaacagattttggtgctttggtttgccacaaa
cttgtgtctgaacgtcaacctgacatccaggaaccagtagagagagctattgaacagtgt
agtaaccaaaatccctctccaagtgatgctgggtctttgctgggctcgacacaagttatt
gaacaactgagtcagcatgacccccctccaaatgttgctgaatcctctctgggttgtttg
acacaactactagacaattttactccggatgcatcaacatcaagtacaggagggactaaa
agtcatccaagtctcaacacagtatttccagacatgctgttgcagcagaagcctttagat
gcagatgaaccattcttcatcctctctctgactgagatcccagtcggctcattaggggag
gctgtggacagtgtgcctgagtccctcccttatcttcctgtaacagatgtatcagtaggg
caacagagtgtttctggagagagtttggcagcagctggcaacgggctcctgtctaatgta
gctgtgttcatggaggagagtggtgaaacaggcctcatcaaagcaatagatattgggcct
gacccagctgcaaatataggttcgatcatggagaatccagtggatccacatgataatatt
acagtccatgcatctgaattacctgagactgtagagaataatgatgggactgaaatgccc
cccgcaaagcagagactaatggacacttgtagaagaagagccaaactgcaggttaagccc
aatactaccaagaggaaacaagccagcaagaccctcgctgctaaggaagcagagttgatc
cccatttacccaaaacccactgggcactcagggccttctgtgcagccaaaagtcttctat
gacgatgtcactgagccacagaaaggaagtgatgatcctatggatggtgaaaaagagact
ctgaggggcggtgaggaccctgaggatagcagctcaggagcacaaatctcaaggactagg
cggtctagtagtcggaatagaagagccgaaggctcccttttcctaccttctgagacttcc
aacgctgcccctgcaagcggggaaaccctctcgacatcttctaccacatcaccaacacaa
acagaggtggacgccgaccagacttgtgaactcagcccactatgctcagacacaactcct
aacacttctctgtatcctgctgaggtttcagcttctcagcaaagtgtggagagcagttct
atggaggaggagcccaccagtgtgtctcagtacttcttaagtgatatttttacagaagtg
actgcagagaaaaatgatgagactgaaattccccctgcagcgcagacagaaatggacgct
catagaagagaaccagccaaactgcaggttaagcccaacactaccaagaggaaacaagcc
atgaagaccctcactgccaaggaagcagagttgatccccattcacccaaaacccactggg
cactcggggcttgctgggcttactgtgcagccaaaagtctttgatgacaatgtcactgaa
ccacagaaaggaagtgatgatcatatggatgttgaaaaggagactctgacgggtggtgag
gaccctgaggacagcagctcaggagcacaaactacacggagtagtagtcggaatagaaaa
gccaaaggctctctttccctaccttctaagacgaacaacgctgcccctgcaagcgattct
ccacctggcaaagaggctcccaagggccgtaaggtcaaaactccacgcgcagcaggaaaa
ccatctaccccagtaactggtgtctcaacatcgtatgatgtcactcccacattcagtccg
acacagccgacccaggaagcccacttaacttcttctaccacgtcaccaacacaaacagag
gtggacaatgaccagacttgtgagctcagcccactgtgctcagacacaactcctagcact
tctctgtatcctgctgaggtaaggaaggtctcagcttctcagcaaagtgtggagagcagt
tctatggaggaggagcccaccagtgtgtctcagtacttcttaagtgacatttttacagaa
gtagaagagggttga
DBGET
integrated database retrieval system
