Etheostoma spectabile (orangethroat darter): 116704286
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Entry
116704286 CDS
T08457
Symbol
arhgef28
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116704286 (arhgef28)
Membrane trafficking [BR:
esp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116704286 (arhgef28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
PH
SOS1_NGEF_PH
PHD
PH_13
Prok-RING_1
DUF7588
C1_2
Ank_2
PHD_2
Motif
Other DBs
NCBI-GeneID:
116704286
NCBI-ProteinID:
XP_032395526
LinkDB
All DBs
Position
16:12630137..12679021
Genome browser
AA seq
1765 aa
AA seq
DB search
MEVDRREVPLYGQVQANVRLQANAPEDAEFYVVLQGSSLTHVTAAKRGDDGLTLSFTVPG
HSIVEVVSVTSYFYAEDQVKPCEGEASLKYLRDVAQEAAEYLSANRDQLGPESYLEVLER
FSALVQEADEERFAAGLDCNEEDVQLRQSSGDEAGLRQLDEKITQAMANMDYPQQWKNTV
SQPREAAELQPKETLLHLAVRLGLVRLSRFLIHQPRGQRALTLPNQEGDAPLQLAQKDGQ
HAMFRVLTAPPGPVDGPVPGVWCVWSDSSCMLRFCPGTDSLSLTVRQTPGSRPQDGVLIL
RDRRGDHNILKLINVLKADGEADKRGKEEFLPSDGGISTELRVEEPALVDNVFEQQLVLS
LDDDDEEEYPSSLSVNGHPMPSSGVQSQSTQRATSPLLSMINSSDQTFTLQTQEEDDNIK
YSISEVTRDSTGTDSGLWDTVDSDDLLLLATDTPPPYSDEFYTASLPCSPPLSPAGQALS
RLSRTASSEPTDPRESPPMDTCDLSLVALEVDSEEDSPEPKSPLSPLSSDVERSEDKREI
LRPSPDLTCTRSQSASACEPTTKESGDQGIRLRSYSYSSPKISFRPARFARDNNTSDISP
DAVLHSVSHSRSLLQALSLSKSLSLLHPGKQRASSISEQLHENREIRFRKRAQSADDEDS
MELAESLQHLTLSEFLKEIEEEELDKYNIPAKVESEKYKVIRTFSFLKNRMSSTRNKTKA
KGKDREAKDGQLNGHRFNTGSCLGPTVCVVCEKPASGKDLLHCSSCTTIVHKGCKESVPP
CLKKLQDKYAVTTVKNRTASLPQNFTVRDSPPQCVVPISTSLPVMKDTATHLCLLSGSFP
NSDSHFSESSLKESDVGKVTSRSEELLPTPFSSTSTDSSFGEDCVDACIHSDISADAVDY
EAESWSLTVEHKFCKKQDKRAVKRQDVIYELMQTELHHLQTLHIMAEVFRRGMREEVQLD
PEAVERVFPCLDQLLLFHHAFFAAMKERRHSSAQPQGHSNYLIQRIGDVLLQEFSDENSE
KIKQVYGEFCSRHNEAVSFFKELQQHNKRFQNFIKQQGNNSLVRRREIPECILLVTQRIT
KYPVLLERILKYTQEETEEHADLSKALVQIREVIAAVDLSVSEYERRQRLQEVWNRMENR
SAAKLKNGHTFRKQDMMGPGQTLKHQGLLLWKTATGRLKDVLALLLTDALIFLQEKDQKF
TFATVDQKPPVIALQKLIVREVANEERGMFLISASAAGPEMYEVHTSSKEERNTWMRLIR
EAVESCPEEEEEYTSESEEEKRAAEARIQKINKLQENLLSQDQRICSSLEEKLQVYAELA
ALSGRMDSSLVPPRLLVQPHPEELPQATVLLAAALQEAKNLKATLSSKACFPSSPSPDSD
TDSVFPVSPAALVEPPSDWLSEALELQSPPLLQKTNTNDIDFKVAQSVQSLTQLLYSLQA
TVTIQDSCYEVQRLLLQETGRPSPRGQRLHLPSIRCNTLQEQEKQRNLEKRKEEVAAAQR
LQNRLRQEKERWERECQARESQQGEQESRLEERERQCLLETERLRRERDELDEQLEEYQQ
SLERLREGQRNVERERERLENQQKLLQTWNHSRQRSLPTVIPPMVIPLDGQQDSTPSQSS
VHAGNGSVFVNEAAFAGTSVNNRHVNHKRNDPNAHNCLNTLLARSNSRHASIAKAPHSQH
SDSQGWMMGTGYLCSPAGRLGLQQTASDLDSHSYIGETWSSTASGVNPYPVLPHPCDPQL
DLSALVSLETDSGGEEGSEETIVYL
NT seq
5298 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggacagaagagaggtgcctctatatggacaggtgcaggcaaatgtgaggtta
caagccaacgctcctgaagatgcagagttttatgtagttttacaaggctccagccttaca
catgtgactgcagcaaaaagaggagatgatgggctgacccttagcttcacagttcccggc
cattccattgtggaagttgtctctgtcacatcctacttttacgcagaggaccaagtcaag
ccatgcgagggcgaagcatctcttaaatacctcagagacgttgcccaggaggcagcagaa
tacctgagtgcaaacagggaccagcttggccccgagagctacctagaagtcctggagagg
ttttccgcgttggtgcaggaagctgatgaggagcgcttcgctgcaggcctggattgcaat
gaggaggatgtgcagctcagacaaagttcaggtgatgaagctggtctcaggcagctggac
gagaagatcacacaggctatggccaacatggattaccctcagcagtggaaaaacaccgtc
agtcagccgagagaagctgctgagcttcagcccaaagaaaccctccttcaccttgcagtg
cgtttgggtttggttcgtctctcccgtttcttaatccaccaaccaagaggtcaaagggca
ttgaccttacccaatcaggagggagacgcgcctctccagctggctcagaaggacggacag
catgccatgttcagagtgctgacagctcctccaggtcctgtagacggccctgttccaggt
gtgtggtgtgtgtggtccgacagctcctgcatgctgaggttttgtcccgggacggactcc
ctgagcttgactgtgcgacagacacctggcagccgccctcaggacggcgtcttgatcctc
cgagacagacggggagaccacaacatcctcaaactgatcaatgtgctcaaagctgatggt
gaggcagacaagagaggcaaagaggaattccttcctagtgatggaggaataagcacggag
ctccgagtggaagagcccgccctggtggacaatgtttttgaacaacaacttgttctttct
ttggatgatgacgatgaagaagagtacccatcctctttatccgtgaatgggcatcccatg
ccgtccagtggagtccagagtcagtcgacgcagcgtgctacaagccctctgctctccatg
atcaacagcagcgatcagaccttcacacttcaaacacaggaagaagatgacaacatcaag
tacagcatcagtgaagtgaccagggacagcacagggacagacagcgggttatgggacacg
gtggattcagatgatctcctgctgctagccactgacactcctcctccctattcagacgag
ttctacactgcctctctaccctgctctccccccctctcacccgctggccaggcactctcc
aggctgagccgcaccgcctcctctgagccgacagatccgagagaaagtccgccgatggac
acctgcgacctcagtctggtggctctggaagtggacagtgaagaggacagccctgagcca
aagtctccgctttccccgctctcgtcagatgttgagaggagtgaagacaaaagggaaatc
cttcgtccctcccctgacctcacgtgcactcgcagccaatcggcctcagcatgtgaaccc
accacaaaagaatcgggtgaccaggggattcggctgcgttcgtattcctactcttccccc
aaaatcagcttccgtcctgctcgttttgcccgggacaacaacacttccgatatcagccct
gatgccgtactccacagtgtcagccacagccgatctctccttcaggccctctctctgtct
aaatctctgtctcttctccaccctggtaagcaaagagcatccagtatatccgagcagtta
catgaaaacagggagattaggttccgtaagcgagcccagtctgctgatgatgaggacagc
atggagctggcggagtccctccaacatctcacactgtctgagttcctcaaagaaattgaa
gaggaggagttggacaaatacaacatcccagcaaaggtggaatcggagaagtacaaagtc
attcgcaccttcagtttcctcaagaacaggatgtccagtacgcgcaacaagacgaaggca
aaggggaaggacagagaggccaaggatgggcagctgaatggacatcggttcaacaccggg
tcctgtttgggccccaccgtgtgcgtggtgtgtgagaaacccgcatctggaaaagacctg
ctgcattgctccagttgcactactattgtccataagggctgtaaggaatctgtcccccca
tgtttgaagaaacttcaggataagtatgccgttaccacggtgaaaaacaggacagcatcc
ctcccacagaatttcacagtgagagacagtcctcctcagtgtgttgtccccatctctacc
tctctacctgtcatgaaagacacggcgacccacctatgcctactctctggatctttccca
aacagtgacagtcacttcagtgagagttcactgaaagagtctgatgtcgggaaggtgact
agccgatcagaggagctcctgccgactccattctcctcaacttccactgactcatccttc
ggagaagactgcgtggacgcgtgcatccacagtgacatctcggccgatgctgtggattac
gaggctgagtcgtggagtcttactgtggagcacaagttctgcaagaagcaggacaaacga
gctgtcaagaggcaggatgttatctatgagctgatgcagaccgagcttcaccacctacag
acgctacacatcatggccgaggttttccggcgaggcatgagggaggaagtgcagctagat
ccagaagcggtggagcgggtcttcccctgtctggaccagctgctcctcttccaccacgcc
ttctttgccgccatgaaagagcggcgacacagctccgcccagccccagggacacagcaac
tacctcatccagcgaataggggacgtcttgctccaagagttttcagatgagaatagcgag
aaaattaagcaggtgtatggagagttctgcagtcgccacaacgaagcggtcagctttttc
aaagagctccagcagcataacaagagatttcagaactttattaagcaacaaggtaataat
tctttggtgagacggagggagatcccagagtgcattttgctggtaacccaaaggattaca
aagtatccagtgctcttggagaggatcctaaaatatactcaagaggaaacagaggagcat
gcagacctttcaaaagcactggttcagattcgagaggtgatagcagccgtggatctcagc
gtcagcgaatacgagcggcggcagaggttacaggaagtgtggaaccgcatggagaaccgc
agcgcagccaagctgaagaacggccatacgttccgcaagcaggacatgatggggccggga
caaacgctcaaacaccagggcctgcttctgtggaagactgccaccggtcgactcaaagat
gtcttggccctccttctcacagatgcactcatcttcctgcaagaaaaagaccagaagttt
acgtttgccacagtggatcagaagcctccagtcatcgcactgcagaagttaatagtgcga
gaagtagcaaacgaagagagggggatgtttttgatcagcgcatcagccgccgggcccgaa
atgtacgaggtccacacatcatccaaagaggaacgaaacacctggatgaggctcattaga
gaagctgtagagagctgtccggaggaagaagaagaatacacaagtgaatctgaagaggag
aagcgagctgccgaggcccgtattcagaagatcaataagttacaagagaatctgctgagc
caagaccagcggatctgctccagcctggaggagaagctgcaggtctacgcagagctcgct
gctctgagtgggaggatggacagctcgctggtcccaccgcgcctgctcgtccagccgcac
cccgaggagctgccccaggccaccgtgttgctggctgcggctctgcaagaggccaagaac
ctgaaagcgacgctgtcatccaaggcctgttttccatcgagccccagcccggactcggac
accgactctgtgtttcctgtcagccctgctgcgcttgtagagcccccctcagactggctc
tcagaggcccttgagcttcagtccccacctctcttgcaaaaaacaaacacgaatgacatc
gacttcaaggttgctcaaagtgtccaaagtctgacccagttactctacagtctgcaggcc
acagtgactatccaggacagctgctatgaggtccagaggctccttctccaagagactggg
cgtccttcccctcgcggccagcggctgcaccttccgagtatccggtgcaacaccctacaa
gaacaggagaagcagcgtaacctggagaagcggaaggaggaggtggcggcggctcagcgg
ctccagaaccgactgcgccaagagaaggagcgctgggaaagggagtgccaggctagggag
agccagcagggggagcaggagagcaggctggaggagagggaaaggcagtgcctcctggag
acggagaggctgaggcgcgagagggacgagttggatgagcagctggaggagtaccagcag
agcctggagcggctcagggagggccagagaaacgtggagagggaacgcgagcgtctggag
aaccagcaaaagctgctccagacctggaatcacagccggcagaggagtctgcccactgtg
attcctcccatggtcatccctctagatgggcagcaggactcgacaccaagtcagtccagc
gtccacgccggtaacggctctgtgtttgtgaatgaggcagctttcgccggcaccagcgtc
aacaatcgccacgtcaaccacaaaagaaatgaccccaacgcgcacaattgtctcaacacc
ctgctggcaagatccaacagcagacatgcctccattgctaaggctccccacagtcaacac
tcggactcccagggatggatgatggggacgggatacctgtgcagccctgcagggaggctg
gggctgcagcaaacagccagtgatcttgacagtcacagctacattggcgagacctggtca
tcaacagcaagtggagttaacccatatccggtgctcccacatccctgtgaccctcagctg
gacctcagtgcactggtttccttggagactgacagcggaggggaggagggcagtgaggaa
accattgtgtacctctga
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integrated database retrieval system
