Etheostoma spectabile (orangethroat darter): 116704341
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Entry
116704341 CDS
T08457
Symbol
lamc3
Name
(RefSeq) laminin subunit gamma-3
KO
K06247
laminin, gamma 3
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04510
Focal adhesion
esp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116704341 (lamc3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116704341 (lamc3)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
Laminin_EGF
Laminin_B
GPS2_interact
Motif
Other DBs
NCBI-GeneID:
116704341
NCBI-ProteinID:
XP_032395628
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All DBs
Position
16:13790650..13889639
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AA seq
1630 aa
AA seq
DB search
MDSSFAVSFLPLALFFSLHLHSHLLVWAAMDSCYDEEGAPSRCMPKFENIAFNRTVVTSN
VCGSPPEDYCMQTGSTRSCHHCDASDPDLSHNASLLTDFNRNEESTWWQSQSMYYGIQHP
NSVNLSLHLGKAFEITYIRLKFYTSRPESFAIYKRTEVDGPWLPYQYYSASCRKTYGKDA
KGYIRPGDDERTALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDQSVVLKEWVTATDLL
ISLDRLNTFGDEFFKDAKVLRSYFYAISDFSVGGRCKCNGHASECVDEEHLGLVCSCQHH
TVGDDCQRCHPFYQDRPWARATGDSANECLKCNCSGRSDECVFDMEQYRSTGSGGRCVSC
RDNTDGPHCERCRENHYRKSAEEPCLPCNCNIDGSVSLQCDVEGRCACRVGVTGEKCDTC
RAGFHSLGPGGCRSCECDPSGTVDECSPLDGRCHCKPNVEGQSCDRCKPGFFNLQQVNPA
GCQACFCFGHSLACSSSNHYEAINISSDFIEDEDGWLGEFSAGQEYPLLWKEGEVYLLPL
TKEDTGFYKAPEKFLGHQIFSYGQLLSITFTSETAELLPDHVTLLLQGSGVTLSADLSPQ
PVLDLDSGLTSQHSFIVRLHENEMRFEPPLSASKFQQLLNNLTTLRISNAGGQNYTSQLA
GVTLTSAFMSSGPANPPAPWVESCSCPPGFAGQFCERCAPGFTWEDPSRGSLSTCVPCNC
HQHGTCHPETGVCECLDFTTGMTCEHCLDGYYGNALIGTRGDCQPCPCPDRTSCTEIAET
GQVVCTNCPTRQTGIRCQICEDGYYGDPLGHSGATRPCVRCNCNGNVDFNALGICDHITG
RCLKCLRHTEGEHCQRCQRGFYGDALNQTAGQKCKPCSCNPGGTSGHVNECHPQTGNCQC
LAQVTGRDCSYCEVGFFNLQPGAGCERCKCNPIGSSSIACHPITGQCVCRAGVKGRLCDS
CRVGFFGFSSQGCRACNCDPMGSISMQCHGNGTCHCRQGFVGYKCDKCELNYFHNTATHQ
CEECPVCYGLLKKQAEKLRTRLQNLEKLLAPFDCRGRFGEQHHLLKYHMARLYEHEHQRE
DTLPNALEDFLAFQEAREAFIKQFSLLEASTGTLLAQLHSITSALNCSISMTGEEGKDRR
KDEGSRGVCQTFTETMFMVRASQKQLKQATVDLDNMIIPFEVVSGPNKWNMMVNDSQALM
KSHRETADHIEAIASRAVSASEQTLAFLMDLLQDNSTEEYIMNLTEQITQMQQQKENLTA
QVNETVAKQLALKGEAAALKVALGNITSSLHQLALTDASPSTEPDQTQLNLTNPTNHTTK
WGEDLLKQTEELDRQIQTKDNLISKIREEMEPLKLTANKKLEIVDDISELHAHAQGAKVM
ALSSVVTGKEVESDAIALHRELEYMVREWPRQQAQTKAAMKKERPLEEKVLADVRKRVSQ
IAKMLIPALENSSLSSNTTKEAEQTAHAVAKESKAILTQAKHTRTASAHLSSHIDSALQQ
LAEQEMQTDAANSQITSESAVALTSVKEDMEAAKLQLKAYSVTLTELISKIDGNMPLERF
DRILNETARRLSMLRGSVESPALGMKIQKLHLAAKEQQSRMSIIEQDLQEIIEERESLRD
IALNLPQSCP
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atggattcatcatttgctgtgagctttcttcccctggcccttttcttctctcttcatcta
cacagccacctccttgtttgggccgcaatggactcctgctatgatgaagaaggcgcccca
agccgctgcatgcccaagtttgagaacattgccttcaatcgcactgtggtgacatcaaat
gtgtgcggttccccacctgaggactactgcatgcagactggctcaacgcgctcatgccac
cactgtgacgcatcagatcccgacctgagccacaatgccagcctcctgacagacttcaac
aggaatgaggagtccacgtggtggcagagccaatccatgtactatggtatccagcacccc
aattctgtcaacctttccctccacctggggaaggctttcgagataacctatatacgattg
aaattctacaccagtcggccggagagcttcgccatctacaagcgcacggaagtggatggg
ccttggttgccttaccagtattacagtgcttcttgtaggaagacctatgggaaggatgct
aagggttacatacgcccaggagatgatgagaggactgctttatgtacagatgagttcagt
gatatctctcccctcacgggaggaaacgtggctttttccaccctggagggaaggcccagt
gcatacaactttgaccaaagcgtggtgttgaaggaatgggtaacagccactgacctgctc
atctctttggacaggcttaacacttttggagatgagttcttcaaggacgctaaagtgttg
cgctcgtacttctatgccatctctgatttctctgtaggtggcagatgtaagtgtaacggt
cacgccagtgagtgtgttgatgaggaacatctgggcctggtctgttcctgccaacatcac
actgttggagatgactgccagagatgtcaccccttttaccaggacagaccctgggccagg
gccactggagactctgccaatgagtgtttgaagtgtaactgcagtggaaggtcagacgag
tgcgtgtttgacatggagcagtaccgaagcactggcagtggggggcgctgcgtgagctgc
agagacaacactgatgggccccattgtgagcgctgcagagagaaccactacagaaaatct
gctgaagaaccctgcctaccctgcaactgcaatattgatggttcagtgagtctgcagtgc
gatgtagagggaaggtgtgcatgccgagttggcgtgacaggggagaagtgtgacacatgt
cgggctggctttcactcgcttggccctggaggctgcaggtcgtgtgagtgtgaccccagc
gggactgtggacgaatgctctcctctggatggacgctgtcactgtaagccaaacgtggag
ggacagagctgtgacagatgcaagccaggctttttcaacctacaacaagtgaacccagca
ggctgccaagcatgtttttgctttggccactcgctggcctgctcttcgtccaatcactat
gaggctattaacatctcttctgacttcattgaagatgaggatggctggttgggagagttc
tcggcaggccaggagtaccctctgctgtggaaggaaggtgaagtctacctgctgcctctt
acgaaggaagacactggcttctacaaagcccctgagaaattcctgggtcatcaaatcttc
agctacggccagctcctctccatcaccttcacctctgagaccgctgagctgcttcctgac
cacgtcaccttgctactccaaggctctggagtcaccctgtctgctgacctttcaccccaa
ccagtgcttgaccttgactctgggctcacatcgcagcactccttcattgtcaggcttcat
gaaaatgagatgagatttgaacctccactgtctgcgtctaagttccaacaattacttaac
aacctgacaactctcagaatcagcaacgctggaggacagaactacacatcacagctcgca
ggggtaaccctgacctcagccttcatgtcctctggtccagccaatcctcctgctccatgg
gtggaatcttgttcctgtcccccgggctttgcaggccaattttgtgagaggtgcgctccg
ggattcacctgggaagaccccagcagagggtctctctcaacatgtgtgccatgcaactgc
caccagcatggaacctgtcatccagagacaggtgtgtgtgagtgcttagacttcaccact
gggatgacctgtgagcactgcctggatggttactatggcaatgctttgattggcacccgt
ggtgattgtcagccttgcccttgcccggaccgtaccagctgtacagaaattgcggagacc
ggacaggtggtctgtaccaactgccctacacgacagacggggattcgctgtcagatatgt
gaagatggttactatggtgaccccttgggacattctggggctactcgaccctgtgtgaga
tgcaactgcaatggcaacgtggacttcaacgctttgggaatatgtgaccacatcaccggg
cgatgtttgaaatgcttgagacacacagagggcgagcactgccaacgttgccagcgaggt
ttctatggcgatgccctgaaccagacagcaggccagaagtgcaagccgtgcagctgcaat
cctggcggaacctctggccatgtaaatgaatgccaccctcagacaggaaattgtcagtgc
cttgctcaagttaccggacgggattgcagttattgtgaagtaggcttcttcaacctccaa
ccaggtgcaggatgtgagaggtgcaagtgtaatccgattggctcatcgtccatcgcatgt
catccaatcacagggcagtgtgtgtgtcgtgcaggagtgaaaggaagactttgtgattct
tgccgcgtgggcttctttggattctcgtcacaaggttgcagagcctgtaactgtgaccca
atgggctccatttccatgcagtgtcacggtaacggtacctgccactgtcgccagggcttt
gtgggttataagtgtgacaaatgtgagttgaactatttccacaacacagccacacatcaa
tgcgaggagtgcccagtctgctatggtcttttaaagaaacaggcagaaaagctgaggact
cgcctgcagaatttggagaagctgctggctccctttgattgccgcggtagatttggggag
cagcaccacctgctgaagtatcacatggcaaggctttatgagcatgagcaccagagggag
gatactctaccgaatgctctggaggattttctggccttccaagaagcacgggaggccttc
ataaaacaattttccttgctggaagcttccacaggcacactcttagcccagctgcacagc
attacatctgctttgaactgcagcatcagcatgacaggagaagaggggaaggataggagg
aaggatgaagggagcaggggtgtgtgtcaaacctttacagagactatgttcatggtcaga
gcgtctcagaaacagctaaagcaggcaacagtggacctggacaacatgatcattcctttt
gaggtggtgtcaggacccaacaaatggaacatgatggtcaatgactcccaggccctaatg
aaaagtcacagagaaacagcagaccacattgaggccatagccagcagggcggtaagcgcc
tcagagcagaccttggctttcctgatggatctactgcaggacaactccacagaggagtac
atcatgaacctaacagagcaaataacacaaatgcagcagcagaaggagaacctgacagcg
caggtgaatgaaactgtagccaaacagctggccctgaagggggaagctgctgctttaaag
gttgccctgggtaatatcacatcatccttacatcagctggctctgacagatgccagccca
tcaacagagcctgaccaaacacagctcaacctaacaaatccaaccaaccatacaacaaag
tggggcgaggacctgctaaaacagactgaagagctggaccggcaaattcagaccaaagac
aatctcatcagtaagatcagagaggaaatggagcctctaaaactgactgccaataagaaa
ctggagattgtggatgacatcagtgagctgcatgctcacgctcaaggggcaaaggtcatg
gctctgtcgtccgtggtgacagggaaagaagtggaatctgacgccatcgccctgcacagg
gaactagaatacatggtgagggagtggccccgtcagcaggcccagaccaaggctgcaatg
aagaaggaaagacccttggaggaaaaggttctcgctgatgtcaggaaaagggtctcacag
attgcgaagatgctaataccagctctggaaaactccagcctctccagcaacaccacaaag
gaggcagaacaaacagcccatgctgtagcaaaggaatccaaagccattctgacccaagcc
aagcataccaggactgcatctgctcaccttagctcccatatagactctgctttacaacag
ctggctgagcaggagatgcaaactgatgcagccaactcccagatcacttccgagtccgcg
gttgccctgaccagtgttaaggaagacatggaagcagccaagcttcagttgaaggcctat
tctgttacactaactgagctaatcagcaagattgatgggaacatgccgctggagcgcttt
gaccgaatcttaaacgagacagcgcgtcgcctcagcatgctccgcgggagcgttgagagt
ccggcgctgggcatgaagatccagaagctgcatttggccgctaaggaacagcagagccgg
atgtccattattgaacaggacttacaggagatcatagaggagagagaaagtctcagggac
attgctttaaacctgcctcagtcctgtccctag
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integrated database retrieval system