Etheostoma spectabile (orangethroat darter): 116704426
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Entry
116704426 CDS
T08457
Symbol
sema4d
Name
(RefSeq) semaphorin-4D isoform X1
KO
K06521
semaphorin 4
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
esp04090
]
116704426 (sema4d)
CD molecules [BR:
esp04090
]
Proteins
116704426 (sema4d)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
ig
PSI
I-set
Ig_3
Ig_2
Motif
Other DBs
NCBI-GeneID:
116704426
NCBI-ProteinID:
XP_032395790
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Position
16:complement(16401671..16444055)
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AA seq
908 aa
AA seq
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MNQYSLADAMTDKGNFTVPKLSESNMGFGVLGVFLGLLLEVSTHGPHAVPRTSWRHQDLD
LMEFSEPAIFNYSTLLLSEDRDALYVGAREAIFELSKKNVTVKHNKVQWTVAENHMLMCT
QKGKSRERDCLNYIRVLQVVDDKQLYVCGTHAFQPQCDHLNLADFSLGGRPEDGRGKCSF
DPSQSFTTVMVDGELYSGTAYNFLGSEPIISRYSPSQSLLRTEYSTSWLNEPSFVFADVI
SEGSNRVDGEDDKIYYFFTEVSVEYEFFGKLLIPRVARVCKGDLGGQRTLQKKWTSFLKA
KLVCSMPELNFVFNVVHDVFILKGANWRDTVIYGVFTSQWGNVGLSAVCAYNMTAVEEVF
SKGKYMQKATVEQSHTKWVRYNGITPSPRPGACINNQMRRQNISSSLHLPDKTLQFVKDH
PLLEDPVLPIGNRPRLITKDVNYTQIVVERVRALDGNIYDVIFTGTDKGVVHKSVVYEGE
VHIVEEIQLLKNSESIKNLLLSSETRSLYAGSDSGVVQSPTAFCGRYMSCEDCVLARDPY
CAWDLHTACVNIFDAPSQRLRKLIQSLNGDADKCPSASGRSLKDYQRVTVKLGSSAELPC
LVRSNLAQVLWKSNGSVLTEASRFHLVGENGLLIYSVAPEDQGHYECWSVEWAPAAGKNF
SRLLAGYVLTLDLPPRAPHQAGHVTTLGSQEKSSTHAAEGNGKTDRVLLTSALAPPSFTA
TVQFTSPPQTDSSLTPPPSSTIKFLSKQRLPLSSNAPRPDSQDPAAEYLQHSNSIALLFL
FLLFFLLFLTALAYNCYMQYLPAPCLRLRAALLGSHKSADQTEYRACEEGLMMEASAPEK
NNMKEQPTQNGSQTTQNLRALRDTGYETEPECGNGQIPSHTFGDDSLSQEKPFDVECESQ
PIQFADAD
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagtattcgctagccgacgccatgacggacaaaggaaacttcacagttccgaag
ttatcagagtctaatatgggatttggtgtgttgggagtgtttctggggctgctcctagag
gtctccacccatggaccccacgctgtgcctcgaacctcttggagacaccaagatttagat
ctgatggagttttcagagcctgcgatcttcaactactccacgctgttgctgagtgaggat
agggatgcgctgtatgtgggagccagggaggccatctttgaactcagcaagaagaacgtg
acggtcaaacacaacaaggttcagtggacagttgcagaaaatcacatgttgatgtgcact
caaaaaggaaaatcaagagagagggattgtctaaactacattcgagtgctccaagtcgta
gacgacaagcagctgtatgtctgcggcacgcacgcctttcaacctcagtgtgaccacttg
aacctcgctgacttttcgttgggtggtcggcctgaagatggccggggaaagtgctctttt
gacccgtcacaaagctttactaccgtcatggttgatggagagctgtactcggggacagct
tataacttcttaggcagtgaaccgattatatccaggtactctccatcccagtccctgctg
aggacagagtactccacatcatggctcaatgagcccagttttgtatttgctgatgtgatt
agtgaagggagtaacagagtagatggcgaggacgataaaatctactacttcttcaccgag
gtgtcagtggagtatgaattctttggcaagctgctcatcccccgagtggcacgcgtctgt
aagggcgacctcggggggcagcgcactctgcagaagaaatggacgtctttcctgaaagcc
aagctggtgtgctccatgcctgagctcaactttgttttcaatgtagtacatgatgtcttc
atcctgaagggggcaaactggagggacacagtcatctacggggtcttcacctcccagtgg
ggtaacgtgggcttgtcagcagtgtgcgcttacaacatgacagccgtggaagaagtcttt
tccaagggcaagtacatgcagaaggccacagtggagcagtcccacaccaagtgggtccgg
tacaacggcatcactccttctccacgtcctggagcatgtattaacaaccaaatgcgacgg
cagaacatcagcagctctctccacctgccagacaagacccttcagtttgtcaaggaccac
cccctgctagaggaccccgtcctgcccatcggcaacaggcctcgcctcatcaccaaagat
gtcaactacactcagatcgttgtggagagggtccgtgcactcgatggaaacatttacgac
gtcatcttcactggaacagataagggagtcgtgcacaagtcagtggtgtatgaaggagaa
gtgcacattgtggaggagatccagctcctgaagaactctgagtccatcaagaacctgctg
ctgtcctctgagacacgatccctgtatgctggttcagactcgggtgtagtccaatcaccc
acagccttctgtggccggtatatgtcctgcgaggactgtgtcctggctcgagacccatac
tgtgcgtgggaccttcacactgcctgtgtcaatatctttgatgcccccagccaacggctt
aggaagctaatccagagcctgaatggtgacgcagacaagtgtccttcagcgtcaggccgg
tctctgaaggactaccagcgtgtgacagtgaaactagggagctctgctgagctgccgtgc
ctggtacgctccaacctagcccaggtgttgtggaaatccaacggctcggtgctcaccgag
gcctcacgcttccaccttgtaggcgaaaacggcctccttatttacagcgttgctccagag
gatcaaggtcactatgagtgctggtcagtggaatgggcccccgctgctgggaagaacttt
agccggctcctggctggatatgtcctcactctggacctcccgcccagagccccgcaccag
gcaggccacgtgaccaccctcggcagccaggagaaatctagcacacatgcagctgaaggt
aatggtaagacagaccgagtcctactaacgtcggcccttgcccctcccagcttcacagcc
acagtccagttcacctctccaccccaaactgactcatcactaactccgccgcccagcagc
acaatcaagttcctatcaaagcagcgtcttcccctgagctccaacgctccgcgtcccgac
agccaggacccagcggcagagtatttgcagcacagcaacagcattgccctcctcttcctc
ttcctcctgtttttcctcctcttcctgaccgcgttggcatacaactgctacatgcagtat
cttccagctccctgtctgcggctgcgagctgctctcttgggcagtcacaagagcgccgat
cagacggagtatcgggcctgtgaggaaggtctaatgatggaggcatctgcacctgaaaaa
aataacatgaaggagcagccgacgcagaacggcagccaaacaactcaaaatctccgggct
ctccgtgacaccgggtatgagactgagccggagtgtggcaacggtcaaatcccctcccac
acttttggagacgacagcctgtcccaggagaaaccctttgatgtggaatgtgaatctcag
cccatccagtttgcagatgcagattaa
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