Etheostoma spectabile (orangethroat darter): 116704485
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Entry
116704485 CDS
T08457
Symbol
pus1
Name
(RefSeq) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
esp03016
]
116704485 (pus1)
Enzymes [BR:
esp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
116704485 (pus1)
Transfer RNA biogenesis [BR:
esp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
116704485 (pus1)
Prokaryotic type
116704485 (pus1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
116704485
NCBI-ProteinID:
XP_032395909
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Position
16:complement(7554819..7557014)
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AA seq
424 aa
AA seq
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MFKIRPVLSALVNHKLTSERNGGLCKLFCMMSEESRDEETAKLLKRANEENEDSGAEKVK
DTKKLKVEVETTEDDKKYPKKKVVLLLAYSGKGYYGMQRNPGTSQFRTIEDDLVTALIKS
GCIPENHGSDMKKMSFQRCARTDKGVSAAGQVVSLKLRLIEDIIEKINEHLPSQIRVLGL
KRVTQGFNSKNNCDARTYAYMLPTVAFSPKDYDTGNIAAFRLEPETLQRVNRLFVLYKGT
HNFHNFTSQKAPSDPSARRYITEMSCGEPFINSNTQFAVITVRGQSFMLHQIRKMIGLVI
AVIKGYAKEDVMERSWGQEKVDVPKAPGLGLVLERVHFDRYNKRFGGDGLHERLDWECEE
EAIKAFKEAHIYPTIVETECQEGSMVSWMSTLPIHDFEASATATDTQDNKDQKQDNADVG
NDSD
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaatccgaccagtgttgagtgccttagttaaccacaaactgacgtcagagaga
aacggtggcctttgtaaattattttgcatgatgagtgaagaatccagagatgaagagacg
gccaagctgctgaaaagagccaatgaggaaaatgaagactctggtgctgagaaagtgaag
gatacaaaaaaactaaaagtggaagtggaaaccactgaagatgataagaaatatcccaaa
aagaaagtggtcctcctcttggcatactctggaaagggatactatggcatgcagagaaat
ccaggaacctctcagtttaggaccattgaggatgatctggtcactgcacttattaaatcg
ggttgcattccagaaaaccatggcagcgacatgaagaagatgtcttttcaaagatgtgcc
agaacagataagggtgtgtctgcagctggccaagtggtgtctctaaagctacggttaatt
gaagacatcattgaaaaaatcaatgagcatctgccatcacagatccgagtgctcggtctt
aaacgggtgacccaaggcttcaattccaaaaacaactgtgatgcccgtacatacgcgtac
atgcttccaactgtggccttttccccgaaagactatgatactggcaatatagcagccttt
cgccttgagccagagacacttcagagggtgaaccgtctgtttgttctctacaaaggcacc
cataacttccacaacttcacctctcagaaggctccaagtgacccgagtgcccgccgctat
atcacagagatgtcttgtggagaacctttcatcaacagcaacactcagtttgcagtgatc
accgtacgaggccagagctttatgttgcaccaaatccggaagatgatcggcctggtgatc
gcggtgataaagggctacgccaaggaagacgtgatggagcggagctggggacaggagaaa
gtggatgtgcccaaagctccagggctggggctggtcctggagagggttcactttgaccgg
tataacaaacgattcggaggtgacgggctgcatgagcggctggattgggaatgtgaggag
gaggcaataaaggccttcaaggaggctcacatctaccccaccattgtggagacagagtgt
caggagggctccatggtcagctggatgtccacacttcctatccatgactttgaagcttca
gccacagccactgacacgcaagacaataaggaccagaaacaggacaatgcagatgtagga
aatgactctgattag
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