Etheostoma spectabile (orangethroat darter): 116704537
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Entry
116704537 CDS
T08457
Name
(RefSeq) glycine receptor subunit alpha-3-like isoform X1
KO
K05195
glycine receptor alpha-3
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04080
Neuroactive ligand-receptor interaction
esp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116704537
04082 Neuroactive ligand signaling
116704537
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116704537
Ion channels [BR:
esp04040
]
Ligand-gated channels
Glycine
116704537
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
116704537
NCBI-ProteinID:
XP_032395995
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Position
2:complement(27401375..27477323)
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AA seq
498 aa
AA seq
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MRRQQLCVAGFLLAWKLVHFLSVGQCKEVDNAARTRQVPMSPSDFLDKLMGRTSGYDARI
RPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYAEYPDDSLDLDPS
MLDSIWKPDLFFANEKGAHFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMD
VQTCIMQLESFGYTMNDLIFEWQENGPVQVAEGLTLPQFILKDESDLRYCTKHYNTGKFT
CIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSS
GSRTSLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKDLLRFRRQHKNKSKSS
GAAVDPQELADSLHRVNVDHSLKPAEPPNGSLNNICTNSHSREGEVHESRLTSTPSKSKD
TKASSNNAVTVLNTQNAPGGAAAGGRGKSIEEMRKLFIDRAKKIDTVSRAGFPLAFLFFN
IFYWVLYKILRYEDVLKQ
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaggagacagcagctgtgcgtggcgggctttttactcgcctggaaactagtccacttc
ctcagtgtgggtcagtgtaaggaggtggacaatgccgcgaggacacggcaggtcccgatg
tccccctctgacttcctggacaaactgatggggaggacatctggatacgatgccaggata
agacccaacttcaaaggtcctccggtcaacgtttcctgtaacatcttcatcaacagcttt
ggctccatagctgaaaccaccatggactaccgggtaaatatcttcctccgtcagcagtgg
aatgaccccaggctcgcctatgcagaatacccagatgactctctggatctggacccctcc
atgttagactccatttggaaaccagacctgttctttgccaatgagaagggggcccacttt
cacgaagtcactacagataataaactgctgaggatatttaagaacgggaatgttttgtac
tccataaggctcacattaactctgtcgtgccccatggatctaaaaaacttccctatggat
gttcagacctgtatcatgcagctggagagctttggttacaccatgaacgacctgatcttt
gagtggcaggaaaatggaccagtccaagtggccgagggcctcacgctcccgcagttcatc
ctcaaagatgaatcagacctcagatactgcaccaagcactacaacacaggtaaatttacc
tgtattgaggtgcgcttccatctggagcggcagatgggctactacctgatccagatgtac
attccgtctctgctcatcgtcatcctgtcctgggtctccttctggatcaacatggatgct
gccccggccagagtggctctgggcatcaccacggtcctcaccatgacaacacagagctca
ggctccaggacttcactaccaaaggtctcttatgtgaaggccatagacatctggatggca
gtgtgtcttctcttcgtcttctcagcactgctggagtatgctgctgtcaactttgtgtcc
aggcaacataaagacctgctgcgattcagaaggcaacacaagaacaagagcaagagcagt
ggagctgcagtcgatccacaggagctcgctgattcccttcatcgtgttaatgttgaccac
agcctcaaaccagcagagcctcctaatggatctctgaacaacatctgcaccaacagccac
agcagggaaggggaagtacacgagagcagactgacctccactccgagcaagagcaaggac
acaaaggccagctccaacaatgctgttactgtactaaacacccagaatgcacctggagga
gcagcagcaggcggaagggggaaaagcattgaagagatgaggaagttattcatcgacaga
gccaaaaagattgacactgtgtcgagggccggcttccctctggccttcctcttcttcaac
atcttctactgggttctttataagatccttcgatatgaagatgtactcaagcaatag
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