Etheostoma spectabile (orangethroat darter): 116704570
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Entry
116704570 CDS
T08457
Name
(RefSeq) nucleolysin TIA-1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116704570
03041 Spliceosome [BR:
esp03041
]
116704570
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
116704570
Spliceosome [BR:
esp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116704570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_3
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
116704570
NCBI-ProteinID:
XP_032396039
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Position
16:11358232..11369944
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AA seq
387 aa
AA seq
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MDDDQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHAT
ATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGK
ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT
NETTNSKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQTMRQTFSPFGQIMEIRVFPDKGY
SFVRFNSHEAAAHAIVSVNGTSIEGYVVKCYWGKETTDMVSPIQQVQLPQQNTVSFAAQP
YSQWGQWYSNTAAQQIGQYVPNGWQVPSYGVYGQTWDQQGYNPLHAGAGWTGVGAVSNGS
MVEPGQGVNGTVLTNQAGMSAAGYHTH
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgaccagcccaaaaccctgtacgtggggaatctgtcccgggacgtgacagag
gccctcatcttggagttgtttgggcagattggaccctgcaagagctgtaaaatgatagta
gatacagcaggtcatgatccgtactgctttgtggagttctatgagcatagacatgccact
gccacaattgcagccatgaatggtcggaaaatactgggtaaggaggtcaaggtcaactgg
gccacgacgccaaccagccaaaagaaagacacgagcagtcacttccacgtctttgttgga
gatcttagtcccgaaatcaccacagatgacataaaagctgcttttgctccatttgggaaa
atatcggattgtcgagtggtgaaagacatggccacaggtaaatctaaaggctatggcttt
gtctccttcttcaacaaatgggatgcggagaatgccattcagcagatgggaggacagtgg
ctgggaggaaggcagatcaggaccaactgggccacaaggaagcctgcgcctaaaactaca
aatgagacaaccaattccaagcagctatcttttgatgaggtggtcaaccagtccagcccc
agcaactgcaccgtctactgcgggggagtcacaacaggtctcacagagcaaaccatgaga
cagaccttctcacctttcggccaaataatggaaatccgtgttttcccagacaaaggctac
tcgtttgtgaggttcaactcccatgaagcagcggctcatgccattgtgtcagtcaacggc
acatccatagagggctatgttgttaagtgttactggggcaaagaaacgaccgacatggtc
agccccatacagcaggtacagctgccacagcagaacacggtgagctttgcggcgcagccc
tacagtcagtggggtcagtggtacagcaacaccgctgcacagcagattggtcagtatgtg
cccaacggatggcaggtgccgagctatggagtctacggacagacctgggatcagcagggc
tacaatcctctacatgccggtgccggatggacaggtgtgggcgccgtgagcaacgggagc
atggtggagcccgggcagggagtcaacgggacggtgctgaccaaccaggctggcatgagc
gccgctggctaccacacccactga
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