Etheostoma spectabile (orangethroat darter): 116704768
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Entry
116704768 CDS
T08457
Name
(RefSeq) PDZ and LIM domain protein 5-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116704768
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
esp04990
]
116704768
Domain-containing proteins not elsewhere classified [BR:
esp04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
116704768
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
PDZ_2
Motif
Other DBs
NCBI-GeneID:
116704768
NCBI-ProteinID:
XP_032396268
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Position
16:complement(19371157..19422654)
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AA seq
618 aa
AA seq
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MSSSYSVSLAGPAPWGFRLQGGKDFCLPLTISRLTDDGKAAKAKMNIGDIILSINGISTD
SMNHLEAQNKIKACTGNLSLTLRRPSSAPKDGVRKDEPQEIIKPVPITHSAPSTTYTKPS
SQPSPAYNKTARPFGGGSSVVTASSPAAPSIPSQSSAFKPAAPSQPAQPPFLLKSTVPAP
DSAPANSLPRPSPGRSTFPSPSASSSSSNSSSPARVTAPSSNPNVPQPSVYNTPINLYSN
TNACEVVMGQRRGLLESQGVSEHFNGTPPARPRRKANVEPEGHASPLSDASKKRLIEDTE
DWHPRTGTSQSRSFRMLAQLTGTENEQAQENSGKNEAVDKTTPAVHTMPAAKTFSKSAAS
PRNGNVVPASTFKSPAAQKKPSFQPGGPPGFPKGGASPSFGKVTNPAPKGPDRPTPRPHP
QDLNSLVQRAEHIPAGTRTPMCNKCNTVIRGPFLVAMGMSWHPEEFNCAHCHSSLAEHAF
VEEKGQVYCERCYEQFFAPTCACCHQKIMGEVMNALKQTWHVSCFICVACKQPIRGNTFH
MEDGQPYCEKDYYNLFGSNCHGCDYPIEAGDKFLEALGFTWHDTCFVCVVCSTSLEGQAF
FSKKDKPLCKKHAHTVNI
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagctacagtgtctccctggctggccctgccccctggggcttcagactgcag
ggagggaaggacttctgtctgcccctcactatctcacggctgactgatgatggcaaggca
gccaaagccaagatgaatattggagacatcattctgtccattaatggcatttccacagac
agcatgaatcacctagaggcacagaacaagattaaggcctgcacaggcaatctcagcctc
actctacgaagaccctccagtgcccctaaagatggcgtgcgtaaggatgaacctcaagaa
atcattaagcctgtcccaatcactcactctgctccaagcaccacatacaccaagccatca
agtcagcccagtcctgcatacaacaagacagcccggccttttggcgggggcagcagtgtg
gtcacagcttcttccccggctgccccctccattccctcacaatcatccgcttttaagcca
gctgccccttctcaaccagcacagcctccatttctgctgaagtcaaccgtccctgcccca
gactccgctccagccaactcacttcccaggcccagccctggtcgctccaccttcccctcc
ccgtctgcctcttcctcctcatctaactcatcctctccagccagagtgacagccccctcc
tccaatccaaatgtcccacagccctctgtctataacacacctatcaacctctactccaat
accaatgcttgtgaagtggtcatgggacagagacgaggtcttttggagagccagggggtg
tcggagcacttcaatggaacacctccagctagacctaggaggaaagctaatgtggagccc
gagggtcatgcatccccactgagtgacgccagcaagaagcgtctgatcgaggacacagag
gactggcacccacgcactggcacctcccagtcccgctccttccgtatgctggctcagctc
accggaactgaaaatgagcaagctcaagagaacagtggaaagaatgaggcagttgacaaa
accactcctgctgttcacaccatgcctgcagcaaaaacgttttccaaatctgcagcatca
cccaggaatggcaacgtcgtccctgcttccacgttcaagagcccagcagcccagaagaaa
ccttccttccagcctggaggcccaccaggttttcctaagggtggcgcatctccttcgttt
ggcaaagttaccaaccctgcacccaaaggtccagaccgccccaccccacggccacatccc
caggacctcaactctctggtgcagcgggcagagcacatcccagccgggacacgcacccca
atgtgcaacaagtgcaacactgtcatcaggggcccattccttgtggccatgggcatgtca
tggcaccccgaggaattcaactgtgctcactgccactcctccctggcagagcatgcattt
gtggaggagaagggccaggtgtactgcgaacgttgctacgagcagttcttcgctcccacc
tgtgcctgctgccaccagaagattatgggggaagtcatgaatgccctgaaacagacctgg
catgtgtcctgtttcatctgtgtcgcctgcaaacagccaatcaggggcaacacctttcac
atggaggatggacagccatactgtgaaaaagactactacaacctgtttgggtccaactgc
cacggctgtgactaccccatcgaggcaggggacaagttcctggaagctctaggattcacc
tggcatgacacctgctttgtgtgtgtggtctgctctactagtctggaaggtcaggcgttc
ttctccaaaaaagacaagcctttgtgcaagaaacatgcccacactgttaacatctga
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