Etheostoma spectabile (orangethroat darter): 116704787
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Entry
116704787 CDS
T08457
Symbol
itga1
Name
(RefSeq) integrin alpha-1
KO
K06480
integrin alpha 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04510
Focal adhesion
esp04512
ECM-receptor interaction
esp04810
Regulation of actin cytoskeleton
esp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116704787 (itga1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116704787 (itga1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116704787 (itga1)
04810 Regulation of actin cytoskeleton
116704787 (itga1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esp04147
]
116704787 (itga1)
04515 Cell adhesion molecules [BR:
esp04515
]
116704787 (itga1)
04090 CD molecules [BR:
esp04090
]
116704787 (itga1)
Exosome [BR:
esp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116704787 (itga1)
Cell adhesion molecules [BR:
esp04515
]
Integrins
Integrin alpha subunits
116704787 (itga1)
CD molecules [BR:
esp04090
]
Proteins
116704787 (itga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
Integrin_A_Ig_1
VWA_2
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
116704787
NCBI-ProteinID:
XP_032396301
LinkDB
All DBs
Position
16:complement(15151854..15197463)
Genome browser
AA seq
1182 aa
AA seq
DB search
MLGMSHFTLTTAAVVVLLPCVLSFNVDQKNSLSFSGPLEDMFGYTVQQFENSEGKWVLIG
SPLSGQPAKRTGDVYKCPVGRGDNTCVKLELPKNTTVPNLHEVKENMTMGTTLVTNPNGG
FLACGPQYGYMCGQQQYISGVCANVSDSFQILNSVAPAVQECAKELDIVIVLDGSNSIYP
WTSIIDFLLRFIKKIDIGPQLSQVGIVSYGETVTHRVNLSQFDNQQNLLDFVNELPQQTG
FKTMTFLGIDTARKEAFMPERGARPGVKKVMVIVTDGESHDFYNLDKVIGVCEDDDIERF
GIAVLGDYNRQNKSAEDVQKFIKEIKSISSKPLHDHFFNVSDEVALLSIVDALGSKIFAL
EATTGNFTSSFEMEMSQAGFSAHTSKEGVLLGAVGAYDWNGTVIMHAAGETIIPGKTQFY
DPETEAGYERLAGYLGYDVQSASTPDGVLYITGAPRYNHTGRVVIYRLNKTNNVVVSQIL
KGEQLGSYFGSVLQTVDVDGDSYTDLLLVGAPMYMGTERNEQGLVYVYKLKQDGQFEHEF
TLKPINQSCCTADSASCSNKNEPCGARFGTAIAAVSDLNLDGFNDVAIGAPFENDHRGAV
YIYHGEKTSLKEKFVQRIPAGGDSEKVKFFGQSIHGVMDLNGDGITDVTIGGLGGASLFW
SRDVAELRANMTFDPVKINLQQTQYQCEHGGRKSVCVTTDVCFVYGIKSDKQDINTPAEV
RYNLTLDALRAKARASFIDLDDKSDRKITSSFTIKDRERKCVQETFMMSARLDFRDPLMV
SLEFGLADEDQGPVLDESLPRSINKTIPLVDCGNDQKCIADLSLKAEPNVKKMMIKANKD
KIDVNINVRNSKDNAYNTKVTVSFTPNINYVKVEPEKACTLNDTKVECAVGYPFLGSNVE
ENFKVKFEVNPKHIQDVIQINVTATSDSEELASTLHDNTVHISIPVKYEAGLIFSVRPVD
QHIEVKEGEQYSSAINDTSMIGEEVNISYTVEKSGDMVSPPLDLTVKYPRLSPRQNNLLY
LTHVTTSPQVKCDAERWINPKIIPDIINPKKETLSVFLLSCENLDCASFSCSIPEATISQ
VNVTFRVWKPTFIKGEFTSLYMLVNATLAIKNTDLFELSSNDRTRSVKIQVSKESLGGIP
IWIIIISILIGLLILALVIFILWKMGFFKRKTRDYSKEEMMD
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgctcgggatgagtcatttcactttgacaacagcggcagttgttgtgctgttgccatgt
gtgctgtcgttcaacgtggaccagaaaaatagtttgtcgttcagcggtccactggaagac
atgtttggctacactgtccagcagtttgaaaacagtgaagggaaatgggttttgattgga
tcgccactgtcgggccagccagctaaacggacaggagacgtctacaagtgtcctgtgggg
aggggggacaacacatgtgtcaaactggagttgcctaaaaacacaacagttcccaactta
catgaagtcaaggagaatatgaccatgggaaccacgctggtgaccaatcccaacggagga
tttctggcctgtggtcctcagtatggctacatgtgcggccagcagcagtacatctcagga
gtttgtgcgaacgtcagtgattccttccagattctcaactctgtggcaccggccgtgcaa
gagtgtgcaaaggagttggacattgtcatagttctggatggatctaacagtatctacccc
tggaccagtatcatcgatttcctgctacgtttcatcaagaaaattgatattggacctcag
ctctcacaggtggggatagtgtcctatggtgagactgtgactcaccgtgtcaacctgagc
cagtttgataaccagcaaaatcttctggattttgttaatgaacttcctcagcagaccggc
ttcaagaccatgacttttctgggcatcgatactgccaggaaggaggccttcatgccggag
cgtggtgcacgacctggggtgaagaaagttatggtgatagttactgacggagagtcacat
gacttctataatctggacaaggtcatcggagtctgtgaagatgatgacatcgagaggttt
ggcattgctgttttgggagactacaatcgtcagaacaaaagtgcagaagacgtgcaaaag
tttatcaaggagattaagtccatctccagtaagccactacatgaccacttctttaacgtg
tcagatgaggtggccttgttatccattgtggatgctttgggaagcaagatttttgccttg
gaagctacaactggcaatttcacctcctccttcgagatggagatgtcccaagctggcttt
agtgcgcatacttctaaagaaggtgtgttactgggagcagtgggagcgtatgactggaat
gggacagtaataatgcatgctgctggagaaacaatcattccagggaagacccagttctat
gacccagagactgaggcagggtacgaaaggcttgctgggtacctcggctatgatgtccag
tcagcatccacccctgatggagtgctgtacatcacaggtgcaccgcggtacaaccacaca
ggccgggttgttatctatcgtctgaataaaacgaacaacgttgtcgtttcacagatactg
aaaggagaacagcttggttcctactttggcagcgtcctgcagactgtcgacgtagatggt
gattcctacacggatctcctcttggtcggagctccaatgtacatgggcacagaaagaaac
gagcagggactagtctacgtctacaaactcaagcaggacggccagtttgagcacgagttc
acattgaagccaatcaatcagtcctgttgtactgccgactcagccagctgcagtaataaa
aatgaaccatgtggtgcccggtttggtacggccatcgcggcagtatcagatctcaatctt
gacgggtttaatgacgtggcgatcggtgcaccgtttgagaacgaccacagaggggctgtc
tacatctatcatggagagaagacatcactgaaagagaaatttgtacagcgtatccctgca
ggtggggacagtgagaaggtgaaattctttgggcagtccatacatggagtcatggatcta
aatggagatggaatcactgatgtaaccataggaggtctgggaggtgcttccctattctgg
tccagagacgttgcagagctccgtgccaacatgacgtttgaccctgttaaaatcaacctg
cagcagactcagtatcagtgtgaacatggtggacgtaaatctgtgtgtgtgacaacagat
gtgtgttttgtctacggtatcaaatctgacaagcaagacataaacactccagcagaggtc
cgctacaatctgaccctggatgctctgcgtgcaaaagccagggcctcatttattgacttg
gatgataaaagtgatcgtaaaattactagtagcttcaccatcaaagacagagagagaaaa
tgtgtgcaagaaaccttcatgatgtcggcccggcttgacttccgagaccctctcatggta
tctttggagtttggacttgctgatgaagaccaaggccccgtcctggatgaaagccttccc
aggtccatcaataagacaattcccctagtggactgtggaaacgatcagaagtgcatcgct
gacctctctctcaaagcagagcctaatgtcaaaaaaatgatgatcaaagcaaacaaagac
aagattgatgtgaacatcaacgttagaaacagcaaagacaacgcatacaacacaaaagtt
accgtcagtttcacaccgaacatcaactatgttaaagtagagccggagaaggcatgcact
ctgaatgacacaaaggtggagtgtgctgttggataccccttcttgggaagcaatgtagag
gaaaatttcaaagtgaaatttgaggtaaatcccaaacatatccaggatgtcattcagatc
aatgtgacagctacaagtgacagtgaagagctggcttcgaccctgcatgacaacacggtg
cacatctccatccctgtgaagtatgaagctggactcatattctcagtgcggcctgtggat
caacacattgaagtaaaagagggtgaacagtattccagtgcaatcaatgacaccagtatg
atcggagaggaggtcaacatcagctacacggtggagaagtcaggtgatatggtgtctcct
cctcttgacctgacagtgaagtatcctcgcctgtcgcctcggcagaacaacttactttac
ctaacacacgtcaccaccagcccacaggtgaaatgtgacgcagaacgttggatcaaccct
aaaattatcccggatattataaatccaaagaaagaaactctcagtgtctttctgctgagt
tgtgaaaacctcgactgtgcatcatttagctgctccatccctgaagctacgatcagtcag
gtcaacgttacattcagagtgtggaaacctacgttcatcaaaggcgaatttaccagcttg
tacatgttggtgaatgccacgctggcgatcaaaaacacagacctgtttgaactgagcagc
aacgacaggaccagaagtgtgaagatccaggtttcgaaagagagcttaggaggaatccct
atttggatcatcatcataagcattctgataggactgctgatcttagcacttgtcatcttc
attctttggaagatgggcttcttcaagagaaaaaccagggactactcaaaggaggaaatg
atggactga
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integrated database retrieval system
