Etheostoma spectabile (orangethroat darter): 116704791
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Entry
116704791 CDS
T08457
Name
(RefSeq) thrombospondin-4-B-like
KO
K04659
thrombospondin 2/3/4/5
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04145
Phagosome
esp04510
Focal adhesion
esp04512
ECM-receptor interaction
esp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116704791
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116704791
09144 Cellular community - eukaryotes
04510 Focal adhesion
116704791
09142 Cell motility
04820 Cytoskeleton in muscle cells
116704791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116704791
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esp04147
]
116704791
00536 Glycosaminoglycan binding proteins [BR:
esp00536
]
116704791
Membrane trafficking [BR:
esp04131
]
Endocytosis
Phagocytosis
Opsonins
116704791
Exosome [BR:
esp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116704791
Exosomal proteins of colorectal cancer cells
116704791
Exosomal proteins of bladder cancer cells
116704791
Glycosaminoglycan binding proteins [BR:
esp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116704791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF
cEGF
EGF_MSP1_1
DUF7630
Motif
Other DBs
NCBI-GeneID:
116704791
NCBI-ProteinID:
XP_032396309
LinkDB
All DBs
Position
16:complement(14955029..14971172)
Genome browser
AA seq
940 aa
AA seq
DB search
MGVWAALILALQLLLKLSLRVKAQALVYDLLTSPDCLPDLLQGGLAEQGVNEAFILTSFK
LQPKTGTTVFTLYNPRDNSKYFEFTVMGKLNRAVLRYLRSDKRTSSVTFNNLVLADGQQH
RLLFHLKGMQQQGPGGVELHLDCRLVETVRDLPAAFQGLPAGYGLVELKTMQAREQETLD
ELKLVVGDTFENVASLQDCHLQQRDSVQTLGVNTKQLSNQMLELTKVINELRDVLIQQVK
ETSFLRNTISECQACGLGGTEVVKPKCAPGVCFREDMCIETAEGVECGPCPDGYTGDGFN
CDDVNECQFNPCFPGVKCVNTAPGFRCDACPLGYTGLTVEGVGILFAQTNKQVCDDIDEC
KGPNNGGCTANSICHNSVGSFYCGSCKSGFTGDPVKGCKPEISCGNSLTNPCDINAQCIA
ERDGSIHCQCGIGWAGNGYLCGKDTDIDGYPDDKLKCKDSSCKKDNCIFVPNSGQEDSDR
DGQGDACDDDADGDGILNEQDNCWLKANVDQRNSDKDSHGDACDNCRTVENPDQKDTDSD
GKGDACDDDMDGDGLKNFLDNCQLVQNRDQLDRDGDGVGDACDSCPDIPNPNQSDIDNDL
VGDSCDTNQDSDGDGHQDTKDNCPFVINSSQLDTDKDGQGDECDDDDDNDGIPDTIPPGP
DNCRLVPNPDQIDDNDDGVGDLCESDFDQDKVIDRIDNCPENAEVTLTDFRAYQTVVLDP
EGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTVTDDDYAGFIF
GYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSRSGPGEHLRNSLWHTGDTN
DQVRLLWKDPRNVGWKDKVSYRWYLQHRPQVGYIRARFYEGTELVADSGVTIDTTMRGGR
LGVFCFSQENIIWSNLKYRCNDTIPEDFQEFSTQHGVDSL
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgtgggcagctctgattctggccttgcagctgctattaaaattgagcttacgc
gtgaaggcccaggctttagtctatgatctgctcacctcgcctgattgcctgccagacctg
ctgcagggaggtctggctgagcaaggggtgaatgaggctttcatcctaacctccttcaag
ttgcagcccaagaccggaaccacggtgtttaccctgtacaaccccagggacaacagcaaa
tactttgaattcactgtgatggggaagcttaatagagctgtgttacgctacttgcggagt
gacaagaggacgagctcagtaaccttcaacaacctggtgctggcagacggccaacaacac
agactgttgttccacctgaaggggatgcaacagcaggggccgggcggggtcgagctgcat
ctggactgcaggctggtggagacggtccgggatctccctgctgctttccagggtttgcca
gcaggctatggtctggtggagctaaagaccatgcaagccagagagcaggagactttagat
gagctcaagttggtggttggggacacatttgagaatgttgcttcattacaagactgccat
ctccaacaaagagactctgtccaaactctgggggtcaacacgaagcagctgtccaatcaa
atgctggagttaaccaaggtgataaatgagctgagagacgtcctcattcagcaggtcaaa
gagacctcctttctaagaaacaccatctcagagtgtcaggcctgcggtctaggtggtact
gaggtggtgaaaccaaagtgtgccccaggtgtctgtttccgtgaagatatgtgcatagag
acagcggaaggtgttgaatgtggaccttgtcctgatgggtacaccggggatggtttcaac
tgtgatgatgtgaatgagtgccagtttaacccctgtttccctggagtgaagtgtgtaaac
actgccccaggtttccgctgtgacgcctgtccactgggctacaccggcctaacagtggag
ggtgtgggcattttgttcgcccagaccaacaaacaggtctgtgacgacattgacgaatgc
aaaggacccaacaatggaggctgcactgcaaactcaatatgtcataactctgtgggctct
ttctactgcggaagctgtaagtcaggtttcacaggagatccggtcaaaggctgtaagcca
gagatcagctgcggcaatagcctgaccaacccctgcgatatcaacgcccagtgtatagca
gagagggacgggtcaatccattgtcagtgtggaattggctgggctggtaacggatacttg
tgtgggaaggataccgacattgacggatacccagatgacaaactcaaatgcaaagattcg
agctgtaaaaaggataactgcatcttcgttcctaactccggtcaagaggattccgacagg
gatggtcagggagacgcctgtgatgacgatgcagacggtgacggtatactaaacgaacag
gacaactgctggttgaaggccaacgtggaccagaggaacagtgataaggacagccacggt
gacgcctgtgataactgtcgcactgtggagaaccctgaccagaaggacaccgacagcgac
ggcaaaggggacgcctgtgatgacgacatggatggagacggcctgaagaactttctggac
aactgccagcttgtccaaaacagagaccagctggaccgggacggagacggagtgggagac
gcctgtgacagctgccccgacatccccaacccaaaccagtctgatattgacaatgacctg
gttggagactcctgtgacacaaatcaagacagtgatggcgacggtcaccaggacaccaag
gataattgcccgttcgtgataaatagctcccagctggacacggacaaagacgggcagggt
gacgaatgtgacgatgacgacgacaacgatgggatccccgacaccataccaccgggacca
gacaactgtcggctggtaccaaaccctgaccagattgacgacaatgatgatggagttgga
gacttgtgcgagtctgactttgaccaggacaaagtgattgacaggatcgacaactgtcct
gagaatgctgaggttaccttgactgacttcagggcttatcaaacggtggtgctggaccct
gagggcgacgcccagattgaccccaactgggtcgttttgaaccagggaatggaaattgtt
cagaccatgaacagtgacccaggactggctgttggttacactgctttcagcggagtggac
tttgagggcacatttcacgtgaatacagtgactgacgatgactacgctggcttcatcttt
ggctaccaggattcgtcctccttctacgtggtgatgtggaagcagactgagcagacctac
tggcaggcaacacccttcagagctgtggccgagcccggcatccagcttaaggctgtgaag
tctagatcgggccccggggagcacttgagaaactcactgtggcacacgggagacaccaac
gaccaggtgcgtctgctgtggaaggacccgagaaatgtaggctggaaggacaaggtgtcc
taccgttggtacctgcagcaccgtccacaagttggatacatcagggcgcggttttatgaa
ggaactgagctggtggcagactctggtgtaactattgacacgacaatgaggggaggacga
cttggtgtgttctgtttctctcaagaaaatatcatctggtccaatttgaaatatcgctgc
aatgacaccatcccagaggatttccaggagttcagcactcagcatggtgttgactcactc
taa
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