Etheostoma spectabile (orangethroat darter): 116704888
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Entry
116704888 CDS
T08457
Symbol
nrxn1
Name
(RefSeq) neurexin-1 isoform X1
KO
K07377
neurexin
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116704888 (nrxn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116704888 (nrxn1)
Membrane trafficking [BR:
esp04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
116704888 (nrxn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
116704888
NCBI-ProteinID:
XP_032396486
LinkDB
All DBs
Position
17:15587090..15848706
Genome browser
AA seq
1513 aa
AA seq
DB search
MVLQKPHGAHIIWVGLLICCFVETGSCLEFTDAEGQWARFPVWNACCESEMSFNMKTKSS
HGLLVYFDDEGFCDFLELFLLNGKLSLRFSIFCAEPATVVSDTAVNDSQWHAVTIRRNFK
NTTLKVDNETKWVEVKSKRRDMTVFSHLFVGGIPPELRSVALRLTSAAVKDQLPFVGWIT
DVKVNNTESVMINSEGVLKDLCGSTNMCLNGGVCSLINNEPTCDCNRTGFQGKDCSEEDN
YTEGLAHLMMGDQGKSKGQRGEVWLLRSLLSIQGKEEYVATFKGSEFFCYDLSLNPIQSS
SDEITLSFRTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFND
NDWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTAD
LPGSPVSNNFMGCLKEVVYKNNDVRLELSRMAKQGDPKMKVHGTVAFKCENVATLDPITF
ETPESFIILNKWNAKKTGSISFDFRTTEPNGLLLFSHGKPKQQPKDSKSPQTLKVDFFAI
EMLDGHLYLLLDMGSGTTKTRAVNKKVNDGEWYHVDFQRDGRSGTISINTLRTAYTAPGE
SEILDLDDNLYLGGLPENKMGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDVRRLAEVQ
KAAGVKPSCSKELPKQCLRNPCQNNGVCREGWNRYVCDCSGTGYLGRSCEREATILSYDG
SKFMKVQLPVVMHTEAEDVSLRFRSQRAFGILIATTSRESADTLRLELESGRVRLTVNLD
CIRINCTSSKGPETIFAGQNLNDNEWHTVRVFRRGKSLKLTVDDLLPVEGQMAGDHTQLE
FHNIETGIVTEKRFMSMVPSNFIGHLQSLSFNGMAYIDLCKNGDIDYCELKAMIGFKNII
ADPVTFKSRSSYVTLTTLQAYYSMHLFFQFKTTSSDGLILFNSGDGNDFIVVELVKGYLH
YVSDLGNGAHLIKGNSNKPLNDNHWHNVVISRDANNLHTVKIDTKITTQTTTGAKNLDLK
GNLYIGGVAKEMFKELPKLVHAKEGFQGCLASVDLNGRLPDLMSDALDCVGQIERGCEVA
LMKADLQGPSTTCQEDSCANQGVCLQQWEGFSCDCSMTTFGGPLCNDAGTTYIFGRDGGL
ITYTWPPNDRPSTRADRLAIGFSTHLKDAVLVRVDSSSGLGDFLKLHIEKGNIAVVFNVG
TDDINIEETSKFVNDGKYHIVKFTRSGGNATLQVDDLPVIERYPTGNNDNERLAIARQRI
PYRLGRVVDEWLLDKGRQLTIFNSQTTIQIGGWERDRSRSFQGQLSGLYYNGLKVFNMAA
EGDPNIRIQGSVRLVGESPSSITPQSSTTANRSETSTSIMEITTTTTASSRRVKQTTPRE
PQQTTDDLLVASAECPSDDEDIDPCEPSSGGLANPTGAGPKGYPGTSEVFRESSSTTGMV
VGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGTIVKEKPVNTAKTS
SKGKKNKDKEYYV
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atggttttacaaaagccacatggtgcccatatcatttgggttgggctgctcatttgctgc
tttgtagaaacaggcagttgtctagaatttacagatgctgaggggcagtgggctagattt
ccagtgtggaatgcatgttgtgaaagcgagatgagcttcaacatgaaaacaaagagttcc
catgggctgttagtttacttcgacgatgagggattttgtgactttctagaacttttctta
ctgaatggtaaactcagccttcgtttctcgatcttctgtgccgagcctgcaaccgtcgtt
tctgacacagcagtcaacgacagccaatggcacgcagtcacaataaggagaaactttaag
aatacaaccctgaaggtggacaatgagacaaaatgggttgaggtgaagtcaaaaagacgg
gatatgactgttttcagccatttatttgttggtggaataccaccagaattacgatccgtg
gcgttgcgactcacatcagctgcagtaaaggatcagctacctttcgttggatggataaca
gacgtaaaggtcaacaacacggagtctgtcatgatcaacagtgaaggggtcttgaaagac
ctctgcggttcaaccaacatgtgcttaaatggaggagtctgcagtttaattaacaatgaa
ccaacgtgtgactgcaatcggacggggttccaaggaaaggactgcagtgaagaagacaac
tatactgaaggtctggcacacctgatgatgggcgaccaaggtaaaagtaaagggcagaga
ggggaagtttggcttctaaggtccctactgagcattcaaggaaaagaagagtatgtcgcc
accttcaaaggatcagagttcttctgctacgacttgtccttgaacccgattcaaagcagc
agtgatgaaatcacgttgtcattcagaaccctacagaggaatggactgatgctgcacacg
ggcaaatcagctgattacgtcaacctggcactgaaaaatggggctgtctcactcgtcatt
aatttggggtctggagcctttgaagctcttgtggagccagtcaatgggaaatttaatgac
aatgattggcatgatgtcaaagtaacaaggaatctacgtcagcactcaggcattggacac
gctatggtaacaatatccgtggatgggattctgaccaccacaggatatacacaagaagac
tacaccatgctaggctctgatgactttttctatgttggagggagtcctagcacagctgac
ctgcctggctctccagttagcaacaacttcatgggctgcctcaaggaggttgtttacaaa
aacaacgatgtgagacttgagctgtccaggatggccaagcagggtgatcccaagatgaag
gtccatggtactgtggccttcaagtgcgagaatgtggccactctggaccccatcacattt
gagacgccagagtctttcattatcctcaacaagtggaacgctaagaagacaggctcgata
tcctttgacttccgcaccacagagcccaatggccttctcctcttcagccatggcaagccc
aagcagcagccaaaggattccaagagtccccaaactctgaaggtggacttctttgccatt
gagatgctggatggccacctgtacctgctgctggatatgggttcaggaacgacaaagacc
agggcagtcaataaaaaagtaaatgatggcgagtggtaccatgtggacttccaacgtgac
ggcagatcaggtaccatctctatcaacaccctacgtactgcctacacagcccctggggaa
agtgagatcctggacttggatgacaatctctacctcggtggtctgccagagaacaaaatg
gggctggtgttccccactgaggtgtggacagcactactcaactacggttatgtgggctgt
atccgggacctgttcattgacggacagagtaaggatgtcaggcgcctggccgaggtccag
aaggctgccggggtcaaaccctcctgctctaaggagcttcccaaacagtgtttgcgcaat
ccctgccaaaacaatggggtctgtagagagggctggaaccgctacgtgtgtgactgctct
gggactggatacctgggacggtcctgcgaaagagaggcgaccatcctcagctacgatggc
agtaagtttatgaaggtccagctgccagttgtgatgcacacagaagctgaagatgtgtct
ctgcgcttccgctcccagcgagcctttggcatcctaatagccaccacatctagggagtct
gctgacaccctgcgtctcgagttggagagcggccgcgtccggctgactgtcaatttagat
tgtatcaggattaactgtacctccagcaaaggtccagagactatttttgcgggtcagaat
ctgaacgataatgagtggcacacagtacgtgtgttcaggaggggcaagagtttgaaactg
accgtagatgatctgctgcctgtggaaggtcaaatggcaggtgaccacacccaactggag
ttccataacattgagacgggcattgtgacagagaagcgcttcatgtccatggtgccgtcc
aacttcattggtcacctccagagcctctccttcaatggcatggcctacatagacctctgt
aaaaacggtgacattgattactgtgagctcaaagccatgattggcttcaagaacatcatt
gctgacccagtcaccttcaagtcgcgctccagctatgtgaccctcactactttgcaggcc
tactactccatgcaccttttctttcagtttaaaaccacctcctccgatggcctcatcctg
tttaacagcggggatggaaatgacttcattgtggtggagctggtcaaaggttacctgcac
tatgtgtctgacctgggaaatggagcccacttgatcaaaggcaactcaaacaagcccctg
aacgacaaccactggcacaatgtcgtaatctccagggacgccaacaacctccacaccgtc
aagattgataccaagatcacaacacagacgaccacaggagccaaaaacctggacctgaag
ggtaacctttatattggtggtgtggctaaggagatgttcaaggagctgcccaaactagtg
catgccaaggagggttttcaaggttgcctggcatcagtggatctgaacgggcgactccca
gacttaatgtcagatgctctggactgcgtgggacagatagagagaggatgtgaagttgca
ttgatgaaagctgacttgcaaggccccagcactacgtgccaagaggactcgtgtgccaac
cagggtgtgtgtcttcaacagtgggagggcttcagctgtgactgcagcatgacgacattt
ggaggtccgctgtgtaatgatgcgggaacaacttacatatttgggcgagatggtggactg
atcacatacacatggccgccaaatgaccgtcccagcacgagggcagatcggctagccatt
ggcttcagcacgcacctgaaggatgctgtcctggtgagggtggatagctcctctggtctc
ggagacttcttgaagctccacattgaaaaaggaaacattgccgttgtatttaatgttgga
accgatgacattaatattgaggagacatcaaagtttgtaaatgacggaaagtaccatata
gtgaagtttacgaggagtgggggtaatgccactctgcaggtggatgatctgcctgtcatt
gagcgctaccccacaggcaacaatgataacgaacgcctggcgattgctagacagcgaatc
ccataccgacttggtcgagtagttgacgaatggctactcgacaaagggcggcagcttaca
atcttcaacagccaaaccactatacagattgggggctgggagcgagaccggagtcgatcc
tttcagggccagctttcgggcctctactataatggcttgaaggtgttcaacatggctgca
gagggggatcccaacattaggatccagggcagcgtccggcttgtgggagagtcgccctcc
tctatcacaccacagtcgagcaccacagctaatcgctcggagacgtccacgtccatcatg
gagatcaccaccaccaccacggcatccagcaggcgagtcaaacagactacaccacgagag
cctcagcagacaaccgacgacttgctggtggcatcagccgagtgtccaagcgatgatgag
gacattgatccctgtgagccgagctcaggtgggttagccaatcccaccggcgctggaccg
aagggttacccaggcacatcggaggtcttcagggagtccagcagcacgacggggatggtg
gtgggcatcgtagcagcagcggcgctgtgtattctcatcctgctttacgccatgtacaaa
taccggaacagagacgaaggttcgtaccacgtagacgagagtcgcaactacatcagcaac
tctgcgcagtccaacggcaccattgtcaaagagaaaccagtaaacaccgcaaaaacctca
agcaagggtaagaagaacaaggacaaggagtactacgtgtga
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integrated database retrieval system
