Etheostoma spectabile (orangethroat darter): 116704891
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Entry
116704891 CDS
T08457
Symbol
thbs2
Name
(RefSeq) thrombospondin-2 isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04145
Phagocytosis
esp04510
Focal adhesion
esp04512
ECM-receptor interaction
esp04518
Integrin signaling
esp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116704891 (thbs2)
04518 Integrin signaling
116704891 (thbs2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
116704891 (thbs2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
116704891 (thbs2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116704891 (thbs2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116704891 (thbs2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esp04147
]
116704891 (thbs2)
00536 Glycosaminoglycan binding proteins [BR:
esp00536
]
116704891 (thbs2)
Membrane trafficking [BR:
esp04131
]
Endocytosis
Phagocytosis
Opsonins
116704891 (thbs2)
Exosome [BR:
esp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116704891 (thbs2)
Exosomal proteins of colorectal cancer cells
116704891 (thbs2)
Exosomal proteins of bladder cancer cells
116704891 (thbs2)
Glycosaminoglycan binding proteins [BR:
esp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116704891 (thbs2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
VWC2L_2nd
EGF_3
TSP1_CFP_C
TSP1_ADAMTS
Laminin_G_3
cEGF
EGF
Laminin_G_2
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
116704891
NCBI-ProteinID:
XP_032396536
LinkDB
All DBs
Position
17:complement(15321561..15340910)
Genome browser
AA seq
1184 aa
AA seq
DB search
MILRRSLFLLLSFYFLHALPQDGEQEDETSFDLFEITQITRKTLGAKQFRGQDSDAPAYR
FIRFDHLPPVSPPILKQILRQIQNNEGFVFVASIRQDRASRGTLIGLEGPDGRRQFEIVS
NGRANTLDLAYWVDGSQNVVSFEDVDLSDSQWKNITLHVHGENANLFVGCSLIDSFILDE
PFYEHLQAEGSRMYVAKGSTRENHFRGLMQNVRLIFDTPVEDVLVSRDCEVPKQDDANIV
SESTEIVDVSPSITTNIIGQKTDDMGADMCERSCEELSTMFQELKGLRVVVSNLIDGLQK
VTEENTVMKEALGRMKNSKEKNMCWQDGRLFDDKEDWVVDSCTKCTCQESKIVCHQITCP
AVACASPSFIDGDCCPVCMPKDSEDGWSPWSEWTECTVTCGIGTQQRGRSCDATSNPCTG
PSIQTRKCSLGKCDSRVRQDGGWSLWSPWSSCSGTCGEGQITRIRHCNAPVPQLGGKDCE
GSGRETQRCTAKPCPIDGGWGPWSPWAICSATCGGGIKSRARVCNSPEPEHGGKKCIGEA
VDSDSCNKKACPIDGCLSNPCFGGVDCNSSPDGSWECGPCPTGFRGNGTHCEDINECDMV
SDVCYKVSGMQRCVNTDPGFHCLPCPKRYKGTQPFGMGVEAAKKNKQVCEPENPCKDKTH
NCHKYAECIYISHFSDPMYKCECKTGYAGEGFICGEDSDLDGWPNQNLVCGANATYHCKK
DNCPSLPNSGQEDFDKDGQGDACDKDDDNDGILDERDNCPLLYNPRQFDFDKDEVGDRCD
NCPYEHNPAQIXXXXNGEGDACAVDIDGDEILNESDNCPYVYNTEQKDTDMDGVGDQCDN
CPLLHNPDQTDIDNDLVGDQCDNNQDIDEDGHQNNLDNCPYVANSNQADHDKDGKGDACD
YDDDDDGIPDDRDNCRLTPNADQLDSDGDGRGDACRDDFDNDNIPDILDVCPENNAISVT
DFRKFQMVHLDPKGTTQIDPNWVVRHQGKELVQTANSDPGIAVGFDEFNAVDFSGTMYVN
TDRDDDYAGFVFGYQSSGRFYVVMWKQITQTYWEDKPSKAFGISGVSLKVVNSTTGTGEN
LRNALWHTGNTVGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGFIRVVVYEGKQIMADS
GPVYDKTFAGGRLGLFVFSQELVFFSDLKYECRDKPTLPTVFIR
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgatactcaggagaagcctcttcttgctcttatctttttatttcctccacgcattacca
caagatggtgagcaggaggacgagacatcatttgacttgtttgaaatcacccaaatcaca
cgcaagactctgggggccaaacagttccggggccaagactcagatgcccctgcttaccgc
ttcatacgctttgaccacctgcccccagtgagcccccccatacttaaacaaatactgcga
cagatccaaaacaatgagggcttcgtgtttgtggccagcatacgccaggaccgggcatcg
aggggtaccctgattggtttagaaggccctgatggtagacggcagtttgagattgtgtcc
aacggacgggcaaatactctggacctagcatattgggtggacggctcccagaatgtggtt
tcatttgaggatgtggacctgtctgactcacagtggaagaatatcacacttcatgttcat
ggggagaatgcaaacctgtttgtaggctgcagcctgatagacagcttcatcctggatgag
cctttctatgagcacctgcaggctgaggggagccgcatgtatgtggcaaagggatccacc
cgggagaaccacttcaggggccttatgcagaatgtgcgtttaatcttcgacaccccagtg
gaagatgtcctggtgagcagagactgtgaggtccctaaacaagatgatgccaatattgta
agcgagagcacagaaattgtggatgtgagtccctccatcactacaaacatcattggtcag
aagacagatgatatgggcgcagatatgtgtgaacgctcctgcgaggaacttagcaccatg
ttccaggagctcaaaggcctacgtgttgtcgtcagcaacctgattgatggcttgcaaaaa
gtgactgaggagaacacagtcatgaaggaggcccttgggaggatgaagaactctaaagag
aaaaacatgtgctggcaggatggccgcctgtttgatgataaggaagactgggttgtagac
agctgcaccaaatgtacctgccaggagtccaagattgtgtgtcaccaaattacatgcccc
gctgtggcctgtgcgagcccgtcatttatcgatggcgattgctgcccagtgtgtatgcct
aaagacagtgaggatggctggtccccctggtcagagtggacagagtgcacagtcacctgc
gggataggaactcaacagaggggtcggtcttgtgatgcaaccagcaacccctgcactgga
ccatctattcagacccgcaagtgcagcctgggcaaatgtgacagccgtgttcggcaggat
ggagggtggagtttgtggtcaccgtggtcgtcctgctcagggacctgtggagaaggacag
atcaccaggatacgacactgcaatgctcccgtgccacaactggggggtaaagactgcgag
ggaagtgggagagagacacagcgctgcactgccaagccctgccctatcgatggtggttgg
ggtccttggtctccatgggcaatctgttcagcaacatgtggaggaggaatcaaaagtcgg
gcacgtgtgtgcaacagccctgaacctgagcacggtggcaagaagtgtatcggggaggcc
gttgacagcgacagctgtaacaaaaaagcctgtcctattgatggctgtctgtccaaccca
tgctttgggggtgtggattgcaacagctctccagatggatcctgggaatgtggcccatgc
cctactggtttccgtggaaatggtacccactgtgaagacatcaatgagtgtgacatggtt
tctgatgtttgctacaaagtgagtggaatgcagcgctgcgtcaacaccgatccaggtttc
cactgcctgccctgtccgaagcgctacaagggcacccagcctttcggtatgggtgtggag
gctgccaaaaagaacaaacaggtgtgtgagccagagaacccatgcaaggacaagacccac
aactgtcacaaatatgctgaatgcatctacatcagccacttcagtgaccctatgtacaag
tgtgagtgcaagactggttatgctggagaaggcttcatttgtggagaagactcagacttg
gatggttggcccaatcagaaccttgtgtgtggtgccaacgccacgtatcactgcaagaag
gataactgccctagccttcccaactctggacaagaagactttgacaaagacggtcaggga
gatgcttgtgacaaggatgacgacaacgatggaattctagatgagagagacaactgcccc
ctcctttacaatcctcgccagtttgactttgacaaggatgaagttggagaccgctgcgac
aactgtccctatgaacacaaccctgctcaaatannnnnnnnnnacaatggagaaggggat
gcctgtgcagtggacattgatggagatgaaattctgaatgagagcgacaactgcccctat
gtgtataacactgagcagaaggacactgacatggatggagttggtgaccagtgtgacaac
tgtccattgttgcacaaccctgaccagacagacatagacaatgacctggttggagatcag
tgtgacaataaccaggacattgatgaggacggccatcagaacaacctagacaactgtcca
tatgtggccaactccaaccaggctgaccacgacaaggatggcaaaggagacgcatgtgac
tatgatgatgatgatgatggtatacctgacgacagggacaactgcagactgacacccaac
gcagaccagctggactctgatggcgatggaagaggggatgcctgcagagatgactttgac
aatgacaatatcccagatattcttgatgtgtgtcctgagaacaatgccatcagtgtcaca
gacttcaggaagttccagatggtccacttggatccaaagggaaccactcaaattgatccc
aactgggtggtcagacaccagggcaaagagctggttcagactgccaactctgacccaggc
atcgcagtaggttttgacgagttcaacgctgtggacttcagtggaacaatgtacgtgaac
acggatagagatgatgactatgcaggctttgtgtttggctatcagtcaagtggccgcttt
tatgtagtgatgtggaagcagatcacacagacctactgggaggacaagccctccaaagcc
ttcggcatctctggtgtttcactcaaagtcgtcaactccaccactggaaccggagaaaac
ctccgaaatgctttgtggcacacgggcaacactgttggacaggtgaggactctgtggcat
gaccccaaaaacattgggtggaaggactacacggcttacaggtggcatctcatccacaga
ccgaagactggttttatacgggtcgtggtctacgaaggtaaacagatcatggccgactca
ggaccagtttatgacaagacatttgccggaggaaggttaggcttgtttgtcttctcgcaa
gagctggtgttcttctccgacctcaagtatgagtgcagagataagccgacgttgccaaca
gtgttcataagataa
DBGET
integrated database retrieval system
