Etheostoma spectabile (orangethroat darter): 116705047
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Entry
116705047 CDS
T08457
Symbol
jag1
Name
(RefSeq) protein jagged-1
KO
K06052
jagged-1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04330
Notch signaling pathway
esp04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116705047 (jag1)
04371 Apelin signaling pathway
116705047 (jag1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
esp04090
]
116705047 (jag1)
CD molecules [BR:
esp04090
]
Proteins
116705047 (jag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
JAG1
DSL
EGF_2
EGF_DL_JAG
JAG1-like_EGF2
EGF_Teneurin
EGF_CA
cEGF
DAG1
EGF_3
DUF5385
Glt_symporter
Motif
Other DBs
NCBI-GeneID:
116705047
NCBI-ProteinID:
XP_032396768
LinkDB
All DBs
Position
17:17634261..17662480
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AA seq
1214 aa
AA seq
DB search
MILRRGSVVVAFLLCFLAKVSEGTGQFELQILSMHNVNGELLNGMCCDGTRNTADRKCTR
DECDTFFRVCLKEYQSRVSAAGPCSFGLGATTVLGGNTFSFKSSVRNDKSRIVLPFSFAW
PRSYTLIVEALDGSNETSDWKLIEKASHSGMINPSPHWQKLTHNGPVAQFEYQIRVSCDE
HYYGFGCNKFCRPRDEFFGHYTCDYNGNKTCLEGWSGPDCNTAICRQGCSTEHGSCKEPG
GCKCLYGWQGQYCDKCIPHPGCVHGTCGEPWQCLCDTNWGGHLCDKDLNYCGTHQPCLNG
GTCSNTGPDKYQCTCAEGYSGGNCERAEHACLSNPCSNGGSCSETSQGYECQCAPGWSGP
SCTINVDDCAPNPCNHGGTCQDIVNGFKCHCPSQWTGKTCLIDANECENKPCVNANSCRN
LIGGYFCECVPGWMGQNCDININDCKDQCQNGGTCKDLVNGYRCVCPPGFAGEHCERDID
ECASSPCLNGGRCQDEVNGFQCLCLAGFSGNLCQLDIDYCSPNPCQNGAPCFNLATDYYC
ACSEDYEGKNCSHLKDHCRTTTCKVIDSCTVSVASNSTPGGERYISSNVCGPHGRCRSQA
GGQFSCECQEGFRGTYCHENINDCESNPCRNGGTCIDKVSVYQCICGDGWEGDHCEINID
DCSTNPCHNGGTCRDLVTDFFCECKNGWKGKTCHSRESQCDEATCNNGGTCHDEGDTFQC
RCSPGWEGTTCNIAKNSSCLPNPCENGGTCVVTGESFTCVCKEGWEGPTCTQNTNDCSPH
PCYNSGTCVDGDNWYRCECAPGFAGPDCRININECQSSPCAFGSICVDEINGYRCVCPPD
RTGPHCQEVTRRPCSVNGHVTPDGLKWDEDCNTCHCSNGKVVCTKMWCGPTSCHMGAKGR
GGCPSGQSCIPIREGHCFVKPCLGLGECWRSNPPPRPTKCHPSSSYQDNSCANITFTFNK
ETMPPSLTVEDVCKQLRRLYVVKNFSLEHSVSITCDPSFSASNEIHVCISTEDHRLDRSP
IKEITDRIIDLVSKRNGNNTIITAIAEVRVPSPSKTDYLVPLLSSIFIVIWVLVLVSIFL
WCMRRRRKQSNHNGTTATGSEDNTTNNVREQLNQIKNPIEKHVGLTVAIKDYENKNSIIA
KIRTNHPEGDEDDKERHLQKGRFAKQPAYTLVERDEKTPISNPNSTSKHPNWTNKQDNRD
LETANSINRMDYIV
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgattttgagacggggctcagtcgttgttgcctttttactctgctttctggcaaaggtg
tcggagggaacggggcaattcgagttgcaaatcttatcgatgcacaatgttaacggagag
ttgctgaacggcatgtgttgtgatggcacacggaacacggcggatagaaaatgcacacgg
gacgagtgcgatacgtttttccgagtttgcctgaaggaataccagtcgagagtttctgct
gcagggccctgcagcttcggattgggagctacgactgtcctcggagggaataccttttct
ttcaagagctctgtcaggaatgacaaatccaggatagtattgcccttcagttttgcctgg
ccgaggtcctacactttgatagtggaagccttggacgggagcaatgaaaccagtgattgg
aagttgatagagaaagcctctcattcaggcatgatcaaccccagcccgcattggcagaag
cttactcacaacggccccgtagcccagtttgagtaccaaatccgggtcagctgtgatgag
cactactacggctttggctgcaacaagttttgtcggcccagggatgagttctttgggcat
tacacatgcgactacaatggaaacaagacctgtctggaaggctggtccggacctgactgc
aacaccgcaatatgtcgacaaggctgcagcactgaacatggatcatgtaaggagccaggt
ggatgcaagtgtctgtatggctggcagggccagtactgtgacaagtgcatcccccaccct
ggctgtgtacatggcacctgtggagaaccctggcagtgcctgtgcgacaccaactggggc
ggccacctttgcgataaagacctgaactactgtggtactcaccagccatgcctgaatgga
gggacatgtagcaacacagggcctgacaagtaccagtgtacctgtgctgagggatactct
ggtggcaactgtgagagagccgaacatgcctgtctgtccaatccatgctctaatggaggg
agctgttcagaaaccagtcaaggctacgaatgtcagtgcgcgccaggctggagcggcccc
tcctgcactatcaatgttgacgactgcgctccaaacccctgcaatcacggtggaacctgc
caggatatagtcaacggtttcaagtgtcactgtccttcacagtggacggggaagacatgt
ctgatagatgccaacgaatgcgagaacaagccttgtgtcaatgccaactcatgccgcaac
ctgattggtggatacttctgcgagtgcgtccccggttggatggggcagaactgcgacatt
aatataaacgactgcaaggaccagtgccagaatgggggaacttgtaaggacttagtaaat
ggctatcgttgcgtgtgtccccctggctttgccggcgagcattgtgagagagacatcgac
gagtgtgcgagctcaccgtgcctgaacggcggccgctgtcaggacgaagttaatggcttc
cagtgcctgtgtctggctgggttttcaggaaatctctgccagctggatatcgattactgc
tcccccaacccgtgtcagaatggagcgccctgcttcaacctggccacagactactactgc
gcttgctcagaggactacgagggcaaaaactgctctcatctcaaagaccactgtcgcacc
accacttgtaaagtgattgacagctgcacagtttccgtggcgtccaacagcacaccggga
ggagagcgctacatttcgtcaaatgtgtgtggacctcacggccgctgccggagccaggct
gggggccagttcagctgcgagtgccaggagggcttcagaggcacctactgccatgagaat
atcaacgactgtgagagtaacccatgccgcaatggaggcacctgcattgacaaagtcagc
gtgtaccagtgcatctgtggcgacggctgggagggcgaccactgcgagatcaacatcgat
gactgcagtaccaacccctgtcataatggagggacatgtcgagacctggtgactgatttc
ttctgtgaatgcaagaatggctggaagggaaaaacgtgccactcccgggaaagtcaatgt
gatgaagccacatgtaacaacggaggcacttgccacgatgagggtgacacgttccaatgc
aggtgttccccagggtgggagggtacgacgtgtaacatagccaaaaactcaagttgtctg
ccaaacccgtgtgagaatggaggtacctgcgtggtgactggggagtcgtttacctgcgtc
tgcaaggaaggctgggagggtcccacgtgcacccagaataccaacgactgcagtccccac
ccatgctataacagtggaacctgtgttgacggggataactggtaccgctgcgagtgcgcc
ccaggcttcgctggcccagactgtcggatcaatattaatgagtgccagtcctctccatgt
gcctttggctccatctgtgtggatgagatcaacgggtatcgttgcgtgtgtccaccagac
aggactggaccccactgtcaagaagtgacaagaagaccttgctctgtcaatggacacgtc
acccctgatggactcaaatgggatgaagactgcaacacttgccactgttctaatgggaaa
gttgtgtgcacaaagatgtggtgtggccctacatcatgccacatgggtgccaaaggccga
ggcgggtgtccctcaggccagagctgcatccccatcagggagggccactgctttgtgaag
ccctgcctcggccttggagagtgctggcgctccaaccctcccccgcgtcccaccaaatgc
caccccagctccagttaccaggacaacagctgcgccaacatcaccttcaccttcaacaag
gagaccatgcctccaagcttgactgtggaggatgtgtgtaagcagctgaggcgcttgtat
gtagtgaagaatttctccttggagcattctgtgtccataacctgtgacccctcattctca
gccagcaatgaaatccacgtctgcatctccacggaggaccatcgtttggaccgaagcccc
attaaagagatcacagacaggataatcgacctggttagcaaacgcaacgggaacaacacc
atcatcaccgccatcgcagaagtgcgcgtgccaagccccagcaaaactgactacctagtg
cccctccttagctccatcttcatcgtcatctgggtccttgttctggtttccatttttctg
tggtgcatgcgccgccggcggaaacagagcaaccacaacgggacgacggccaccggctct
gaggacaacacgaccaacaacgtgcgggagcagcttaaccagatcaagaaccctatagag
aagcacgtgggcctcacggtggccatcaaagactacgaaaacaagaactccatcattgcc
aaaataaggacaaatcatcccgagggggatgaggacgacaaggagaggcacttacagaag
ggccgctttgccaaacagccagcatacacactggtggagagggacgagaagacgcccatc
tccaatcccaactccacatccaaacaccctaattggactaataaacaggacaacagagac
ttggagacagcaaacagcataaacaggatggactacattgtatag
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