Etheostoma spectabile (orangethroat darter): 116705184
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Entry
116705184 CDS
T08457
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
esp03041
]
116705184
Enzymes [BR:
esp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116705184
Spliceosome [BR:
esp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
116705184
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Microtub_bind
Motif
Other DBs
NCBI-GeneID:
116705184
NCBI-ProteinID:
XP_032397027
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All DBs
Position
2:complement(6252505..6261379)
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AA seq
649 aa
AA seq
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MRGSSSFGDRDRGRGRDRPQFGSMGGRNGPPPMKFGNPGERLRKKKWNLDELPKFEKNFY
TEHPELQHKSQYEMEEYCKKKEITIRGTGCPKAISAFHQAQFPQYVMDVLMQQNFKEPTA
IQSQGFPVALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPVCLVVAPTREL
AQQVQQVTYEFGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLETGKTNL
RRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAQDFLKDHIQ
INIGALELSANHNILQIVDVCMDSEKDRKLFQLMEEIMAEKENKTIIFVETKKRCDELTK
RMRRDGWPAMCIHGDKSQPERDWVLAEFRSGKAPILIATDVASRGLDVEDIKFVINYDYP
NSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLAEARQAINPKLLQFADSGQ
GGGRGGGRMRYRGSGYNNPSHMYQGDCDRRMHTGGGGDSKDSRSGFSREGRNDRNGERST
SSSFKDRSQDHRNSFNSGSDQYQSYSGRGGYNSRSAGQSGGGPDKSSQPQGPFGQPPPPL
PPPSSGGAWPLMVHQFAQPKPTPVGFMGQPSYNFASPPPPPPGPPPPRN
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgagggggagttcttcttttggagacagagacaggggccgtggacgagacaggccacag
tttgggtccatgggcggtcgcaatggacccccaccaatgaagtttgggaatccaggtgag
cgtcttcgcaagaagaagtggaacctggacgagctgccaaaatttgagaagaacttctac
actgaacacccagagctccaacacaagagtcagtatgaaatggaagagtattgcaaaaag
aaggagatcaccatcagaggcactggctgtccaaaagcgatctctgcttttcaccaggcg
cagtttcctcagtatgtgatggatgttctgatgcagcagaacttcaaggagccaacagcg
atccagtctcagggcttccctgtggccctgagcggcagggacatggtggggatcgcacag
actggctctggaaagacactggcttatcttctgcctgctattgtacacatcaaccaccag
ccttatctggagaggggagatggcccagtttgtctggtggttgccccaaccagagagctg
gctcagcaggttcaacaggtcacatatgaatttggcaagtcttcacgaatcaaaagcacc
tgtgtctatggtggagcacccaaaggaccacagattcgagacctcgagagaggtgttgag
atatgtattgccacacctggtcgcctcattgacttcttggagactgggaaaactaacctg
cggcgctgcacctacctcgtgctggatgaggctgaccgcatgctggacatgggcttcgag
ccacagattcgcaagatagttgaacaaatcaggcctgatagacagacactgatgtggagc
gcaacctggccaaaggaggtccggcagcttgcccaggacttcctgaaggaccacatccag
atcaatattggtgctctagagctcagtgccaaccataacatcctacagattgtcgatgtg
tgcatggacagtgaaaaggaccggaaactttttcagctgatggaggagataatggctgaa
aaagagaacaaaaccatcatttttgtggagactaaaaaacgttgtgatgagcttaccaag
aggatgaggcgggacgggtggccggccatgtgtatccatggagacaagagccagccagaa
agagactgggtgcttgcagaatttcggagtggtaaagctcccatactgattgctaccgat
gtggcctctcgcggtctggatgtggaagatatcaagtttgtcatcaactatgactatccc
aactcctctgaggattatgtccaccgtattggacgtacggcccgcagtaccaacaagggc
actgcctacaccttcttcaccccagggaacttgcggcaggccagagacctggtccgggtg
ctggcggaggcccggcaggccatcaaccctaaactgcttcagtttgcggactcagggcaa
gggggaggaagagggggtggcagaatgcgttaccgcggcagcggttacaacaaccctagc
cacatgtaccagggggactgtgatcgccgcatgcacaccggtggtggcggcgacagcaaa
gacagccgcagtggcttcagccgggagggccgcaacgatcgtaatggagagcgctccact
tcttcctcctttaaggacaggagccaggatcacaggaatagcttcaactcgggctcagat
cagtaccagagttacagcggcagagggggctacaactcccgcagcgcaggccagtctggc
ggaggcccggataagtctagccagccgcagggtccgtttggccagcctcctcctcctctt
cctcctccatcatcagggggggcgtggcctctgatggttcaccagtttgctcaacctaag
ccaacgccagtgggcttcatggggcaaccctcttacaattttgcttctccaccccctcct
cccccaggccctccacctccacggaactag
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