Etheostoma spectabile (orangethroat darter): 116705208
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Entry
116705208 CDS
T08457
Name
(RefSeq) prominin-1-A-like
KO
K06532
prominin 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esp04147
]
116705208
04090 CD molecules [BR:
esp04090
]
116705208
Exosome [BR:
esp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
116705208
CD molecules [BR:
esp04090
]
Proteins
116705208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
DUF948
CLZ
CCDC90-like
Tweety
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
116705208
NCBI-ProteinID:
XP_032397074
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All DBs
Position
17:complement(13411201..13423325)
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AA seq
838 aa
AA seq
DB search
MGLCESVRGRCWPGSAGTFRAGVGVLLLGLSLAQTVPPQPACPAAVAPQSLVQPQYQDTA
AVDNGVGFMAALVQSFLQTVQPNPLPNDLILKIVHDFDQKTLDQEIIKKILVYEVGFLVC
AAIGVLYIVLMPIVGFFLACCRCCGNCGGKMYQKQTSSIHCLRRTLYWTAFVTTAIILAG
NICMFKSNKAVKVSVDQSQMELNQTIGNIQSFLAAVPQQVNNVVNESYRTVQEVTRNLDA
IGPLLGTEIKERFRGTLDPALHSVKLLDQETVNISLYVDKLNSSLAQLQSSMDRIQANFT
AVKNQINQTLSKPNCNGCNILQSELQKIPLDISITIPTFNDFKSAVDEVNKINLKSQIKK
VEDYFDSIPQRVTNDTKDVVQSSKQLLGGIKTQISEVTNDIPLSNLTKVSETLNQVQGEI
GMVTPAVERAEYIRWAVCVVLCCMVLLVVLCNLLGLVLGPLGLKPKAQPTKRSCTSDCGG
VFLLMGAGFSFLFSWLFMIVVLVLFLLGGNVYTLLCRPWSNGELFKLIDTPGLIPGLEIG
PTLGLKTNISISEIYRDCKDNQPLWTTLHLYELIDLGDLLNVSKYTEQIQQLFENENINL
ATITLLSPEVKKQLGIFSNRATNIDSTAVTQKMNNISSINLNTTADKIDDIAVIQSNNDI
KKELQNEARDLRQIQTNIETTIIPQLKNLNSTLQSLGSITEKINGTVGEVLSNVGAAQDF
FNTSSAQIVRTESKKFLDCQLNYFLVYADWVNITITQQVGRCGPVAGAVDSVEIILCSHI
VESLNAFWFSLGWCMIFFIPSIIFSIKLAKYYRRMKYSDAYDDHLIMNHIPRAQTKFT
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggggttatgtgagagcgtgaggggtcgatgttggccgggcagcgctggaacgttcagg
gccggagtaggagtgttgctgctggggctcagcctggcccagactgtccctccacagcct
gcctgtccagcagctgtggccccacagagcctcgtccagccccagtaccaggacacggca
gcggtggacaacggtgtgggcttcatggcagctctggtccaatccttcctccaaacagtc
cagcctaaccctttacctaatgatctgatcctgaaaatagtccatgattttgaccaaaag
acgttagatcaagaaatcatcaaaaaaatcctggtgtatgaagtgggtttcctggtatgt
gcagccattggcgtactgtacattgtcctgatgcccatagttggtttcttcttggcgtgc
tgtcgctgttgtggcaactgtggtgggaagatgtaccagaagcagacatcctccattcac
tgtctcagaagaactttatactggactgcattcgtcaccacggctattatccttgctggg
aacatatgcatgttcaaaagtaacaaagccgtcaaagtgagtgtggaccagagtcaaatg
gagctcaaccaaactataggcaacatccaatccttcctcgcggctgtgcctcagcaagtc
aacaatgtggtgaatgagagctacagaactgtgcaggaggttaccagaaacctagatgcc
attggacctctgttgggaacagagatcaaggagcggtttagaggaaccctggacccagcg
ctgcactcagttaaacttctggaccaagagactgtaaacattagtctttatgtggacaag
ctgaactcatctttggcccaactgcagtccagcatggaccgcatccaggccaatttcact
gctgttaaaaatcaaataaatcagactttatccaaaccaaactgcaatggctgtaacatc
ctgcagtctgagctacagaaaataccactggacatctccattactattcccaccttcaat
gacttcaagtctgcagtggatgaagtcaacaaaataaatctcaaatcccaaatcaagaaa
gtggaggattattttgacagcatcccccagagggtgaccaatgacaccaaggatgtagtt
caaagcagcaagcagctgttgggtggaataaaaacacagatctcggaggttaccaatgac
atccctttatctaatctgaccaaagtgtcggagactctgaaccaggtgcagggagaaatc
ggcatggtaacaccagcggtcgagagagcagagtatattagatgggcagtgtgcgtggtg
ctgtgctgcatggtccttctggtggtgctgtgcaacctcctgggtctggtcctgggtccg
ctgggtctgaaacccaaagcacagcccacaaagcgctcctgcacgtcggactgtggaggc
gtcttcctcttaatgggcgcaggtttcagcttcctcttctcctggctgttcatgatagtg
gtgctggtgctgttcttgctgggcgggaatgtttacactctgctctgtcggccctggagc
aacggagaactgtttaagctcattgatactccaggtttaattccagggttggagataggt
ccaactttaggactgaaaaccaacatcagtatctctgaaatctatagggactgtaaggat
aaccagcctctctggacaacactgcacttgtatgagctcatagaccttggagacctgctc
aatgtatctaaatacacagagcagatccagcagctctttgagaatgaaaacatcaatctc
gccaccatcactctcctgagccctgaagttaaaaaacaactcggcatcttctccaacagg
gcgacaaatattgactccactgctgtgacgcagaagatgaacaacatttccagcatcaat
ctgaatacaacagcagataaaattgatgatatcgctgtgatacaatcaaacaatgatatt
aaaaaagagcttcaaaatgaggccagggacctgaggcagatccagaccaacatagaaaca
accatcatcccacaactgaaaaacctgaattcgaccctccaaagccttggatccatcaca
gaaaaaatcaatggaacagtgggggaggtgctgagcaacgtgggagcagcacaagacttc
ttcaacacaagctcagcacagatcgtcaggaccgagagcaaaaagtttttggactgtcag
ctaaattacttccttgtttatgctgattgggtcaacattacgataacacagcaggtgggc
cgctgtgggccggtggcaggagctgtggactctgttgagattatcctatgttcacacatt
gtagagtctctgaatgcattctggttcagtctgggctggtgcatgatcttcttcatcccc
agcatcatcttttctatcaaacttgccaagtactaccggaggatgaagtactctgatgcc
tatgacgaccacttaattatgaaccacataccgcgggcccagacaaaatttacctga
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