Etheostoma spectabile (orangethroat darter): 116705212
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Entry
116705212 CDS
T08457
Symbol
rrp12
Name
(RefSeq) LOW QUALITY PROTEIN: RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
esp03009
]
116705212 (rrp12)
Ribosome biogenesis [BR:
esp03009
]
Eukaryotic type
90S particles
Other 90S particles
116705212 (rrp12)
Pre-60S particles
Other pre-60S particles
116705212 (rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
116705212
NCBI-ProteinID:
XP_032397079
LinkDB
All DBs
Position
17:13531220..13543301
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AA seq
1287 aa
AA seq
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MVKSGKLRSGTVSKLKRWKKGHSSDSNPQTSRFRQAAKSRFFSRPSGKSDLTVDALKLHN
DLQAGPLEVSGRKDACMEEEPEAFSERTSGTFLSGLSDCSNLTFRKVQRYWESNSAAHKE
ICAVLAAVTEVIRSQGGKETETEYFAALMTTLEVVDSPESQTAVAYLLNLVMKRVPAPVL
MSKFSDTTKALMDVMSKQATSESASAVRWILSCLATLLRKQDASVWTYPTTLQAYHGLLS
FTVHSKPKVRKAAQQGICSVLRGSDFLFTDNAPTHHPAAVTTAKFCMKEMEQAGGSNEDT
TTLHVLGLLKELMGTFPLGAVKSCCETLLRVMTLSHTLVTASAMQAFHRLFSGKPNASTL
SPELNAQIITALYDYLPSENDLQPLMAWLAVMEKAHVHLASLQSSLSLGHLPRLFSAAMS
CLLSPHAQVVSAATNTLKTLLVECVAPHMEEMGMLTATASAGNPSYVCKMFRIVEEGLSY
RFHASWPFVLQILGCFYRAAGKQAHPIMTKSLQSLADLRSTPQFPFSGELDLAVGGAVES
MGPQVVLGAVPLNITGYDDDLEFPRSWLVPVIRDHVKNTHLGFFASYFLPLASTLKHRAD
ELEQAGQKLEARVYQTLQMQIWTMLPGFCTCPVDLLASFKGIARTLGMAVNERPDLRLTV
CQALRTIVSKSCSTEEEKAEVGRFSKNFLPILFNVYGQQPAAGESGTYRMAILDTIKVYL
TVTETQMVCTFLQKAIDRLRSTDTTEFTRLSMMDLVVAMAPSVDEVTMTKTFELIGPYLE
NKEPGMQKKAYRVLEEMCGGERDECRSFVVANLETLKVVLLDTLKKASSPAKRPRLKCLI
HIVKRLDEEHKDFITALLPEVIICTKEVSVGARKNAYNLLVEIGSAFVRFCGNTKDAMEQ
YLVLVYAGLTGSVTMITCTVLALTRLVFEYKDAIEETTREQLLHNICLLLSSRTREIVKA
ALGFIKVILFIMDPKTLASHATVMMEGVGNIKDDVRRHFRTKLKNIFTKFIRKFGFELVK
SMLPAEHHKVLVNIRKAEARTKRRKQVAEQHDDSESEEDEPKTKSQSIEDILAESDSDLS
EDEGKARNAQKKAGKPQKARAWLKEGEEDDPLNFLDPKVSQRVLATNPGLKKSAKVDHGF
KVTSDGRLIIREDDEEDGKDKDEGEMKDXLEEAGVKSKKTQKRKFRDDNVDEDMDTEPHL
KYKAGGSGIHRPLGRREDTGADYKSKKGKGDVKKQGKLDPYAYIPLKKAQLNRRKRAKLQ
GQFQGMVRGAQKGALSGKKMQKRKRKA
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaatcgggaaaacttcgatctgggacggtgtcgaaactcaaacgatggaagaaa
ggacacagtagcgactcaaacccgcagacgagtcgttttaggcaggctgccaaaagccgc
ttcttcagccgacccagcggaaagagcgatctaacagttgatgctcttaagctacacaat
gatctgcaggcaggtccgcttgaggtcagtggccggaaagatgcctgtatggaagaggag
cctgaggcattttcagaaagaacctcaggtactttcctcagcggcctgtcagactgctcc
aacctgaccttcagaaaggtgcaacgctactgggaatccaattcagctgctcacaaggag
atctgtgcagtgttggcagctgtgactgaggtgatccgtagtcaaggagggaaggagact
gaaacagagtactttgctgctttgatgaccaccctggaggttgtggactcaccagagtct
cagacggcagttgcgtacctcctcaacctcgtcatgaaacgggttcctgctccagtgctc
atgtctaagttctcagacaccaccaaggctctgatggatgtcatgtctaaacaggccacc
tctgagagtgcctctgcggttagatggatcctgtcatgcctggccactttgttgaggaag
caggatgcatctgtctggacttacccgactactcttcaggcctaccacggtcttctcagc
ttcacagttcacagcaagcctaaggtccgtaaagcagcccagcaaggcatttgctctgtt
ctcagaggtagtgacttcctgtttacagataacgctccgacccatcaccctgctgcagtg
accacagccaagttttgcatgaaagaaatggaacaggcaggaggcagcaacgaggacacc
accacactccatgtgctgggtcttctgaaggagttgatggggacctttcctctgggagct
gtcaagtcctgttgtgaaactctgctgcgagtgatgacactcagccatacgctggtgacg
gcgagtgccatgcaagcctttcataggctgttcagcgggaagccaaatgcttcaaccctc
tcaccggaacttaacgcacagatcatcacggctctgtacgactacctgcccagtgaaaac
gacttgcagcctttaatggcttggctcgctgtcatggagaaagcacatgttcacttggca
agtttgcagagttctctgagtttgggccacctccctcgcctcttctctgctgccatgtcc
tgccttttgtcgcctcacgcacaggtggtttctgcagccaccaatacgctaaagaccttg
ttggtggaatgtgttgccccccacatggaggaaatgggcatgctcactgccacagcctct
gcagggaacccctcctatgtctgcaaaatgtttcgtatcgtggaagaaggattgtcctat
cgcttccatgcctcctggccatttgtgctgcagatcctgggttgcttctatcgagctgca
gggaaacaagctcaccccatcatgaccaagtccctgcagtctctggcagacctacgctcc
actccgcagttccccttcagtggggagttggacctggccgtaggaggagctgtagagagc
atggggcctcaagttgtgctgggtgcagttcccctcaacatcaccggctatgatgatgac
ttggagttcccacgcagctggctggtcccggtcatacgggatcacgtgaagaacactcac
cttggtttcttcgcgtcttatttcctccccctggcttctacactcaagcatagagctgac
gaattagagcaagcaggacagaaacttgaagccagagtctaccagacattacagatgcag
atttggaccatgctccctggcttctgtacatgtcctgtggacctgctggcatccttcaaa
ggcatcgcgcgcacactcggtatggctgttaatgaacggccagacctgaggctcacagtg
tgccaggctctacgtactattgtcagcaagagctgctccactgaagaagaaaaagctgaa
gtgggacgcttctccaagaacttcctgcccatccttttcaatgtgtatggccagcagcct
gccgctggagagtccggcacctacaggatggctatactagacactatcaaggtctactta
actgtcaccgaaacacagatggtctgcacgttcctgcaaaaagccatagacagattgaga
agcaccgacaccactgagttcacacggctgtcaatgatggaccttgtagttgccatggct
ccctccgttgatgaggtcaccatgactaaaacctttgaactgattgggccatatttagag
aacaaagagccaggcatgcagaagaaggcgtaccgtgtgctggaggagatgtgcggtgga
gagagagatgagtgcagatcgtttgtcgtggctaatctggaaacactcaaagttgtcctg
ctcgacactctgaaaaaggcctcttcaccagcaaagaggccgagactgaagtgtctgatc
cacattgtgaaaaggctcgatgaagaacacaaagactttatcacagcgctgctgccagag
gtgattatatgcaccaaggaggtgtctgttggcgcacgtaagaatgcctacaacctgctg
gtggaaataggaagtgcatttgtccgcttctgtgggaacacaaaagatgccatggagcag
tatttagtgttggtgtatgcaggacttacaggctccgtcaccatgatcacctgtacagtg
ttggcgctaactcgactggtgtttgagtataaagacgctatagaggagaccaccagggag
cagctgctgcacaacatctgtctgctgttgtcgtcgcgtaccagagagatagttaaagct
gccttaggcttcatcaaggtcatcctcttcattatggaccccaagacgctggcatcacat
gccactgtcatgatggagggagttgggaacatcaaagatgacgtgaggcggcacttcaga
accaaattaaagaacatcttcactaagtttatcaggaagtttggttttgagctggtgaag
agcatgctgcctgcagaacaccacaaggtgcttgtaaacatccgcaaggccgaggctcgc
accaagaggaggaaacaggtcgcagagcagcatgatgactccgagagcgaagaggacgaa
cctaaaacaaagagccaaagtattgaggacatccttgcagagtcagacagtgatttgtca
gaggatgaaggaaaggctcgtaatgctcagaagaaagcaggaaaaccgcagaaagcacgg
gcctggctcaaagaaggagaggaagatgacccacttaacttcctggatcccaaggtttcc
cagagagtgctagccaccaacccagggctgaaaaagagtgccaaggttgaccacggcttc
aaggtgacatcagacggacggctgatcatcagagaggatgacgaggaggatggcaaagac
aaagatgagggagagatgaaagatnatttagaagaggctggagtcaaaagtaaaaagaca
cagaaaaggaagttcagagatgacaatgttgatgaggacatggacactgaaccccatcta
aaatacaaagctgggggctcaggcatccacagacctctgggaagaagggaagacactggg
gcagactacaagtcaaagaaaggaaaaggagatgtgaagaaacaaggaaagcttgatcct
tacgcgtacatccctctgaagaaggcccagcttaatcgaaggaagcgcgccaaactgcag
ggccagttccagggcatggtgagaggagcccagaaaggggcgctgtctgggaaaaaaatg
cagaagaggaagaggaaagcctga
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