Etheostoma spectabile (orangethroat darter): 116705262
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Entry
116705262 CDS
T08457
Symbol
hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116705262 (hps1)
Membrane trafficking [BR:
esp04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
116705262 (hps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_3
Fuz_longin_2
AraC_binding_2
Motif
Other DBs
NCBI-GeneID:
116705262
NCBI-ProteinID:
XP_032397157
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Position
17:12995610..13006493
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AA seq
681 aa
AA seq
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MKCLLIASESAEVLFQWTDPEFQQNVQEQYRASQEEGHGLPAFEDSISTLFAPIIISCST
MVDRLCDSYTSFTTENNHIYVLHQFDECLYIAVNGDGEEGEGDLRRKIYVMKKMIDVMFG
MVTLSSNLLRRELRPQDTEQRARLWKHLQSLLETYSQLRENDQSFLVEAVERLIHPTLCE
QCIEFLERRLVQQLNGSVERAGEEVLHAFILIHTKLLAFYSSRNASSLSTSDLLTLIIMA
QNMYPSNIDLDDTYPEDVESTSGSGPDSFYTPEPSPTDRDSSSSADKPVRGSTPVFEFVD
PDVQMAEDSLQALEVPPPSPSTPRRVFLEVSLKDGLYPMMPHSMYCLPLWPGISLVMLTK
IPTSAGAMSVYMFLEAFAKLEKRLSEGQEGSAATRSQPTIHDIRSKLDKFIKALGPSEIQ
SAQLQNVWTEFKNRAFSRGGPGFNRDLIPWCKNMKTQLCGIYRQCFLIQSGKADIPQRLS
TSLQERAQTMVQEKLMDWKDFLLVKSKRNITMVSYLEDFPGLIHFICVDRSTGQMIAPSL
NITERNTSELGKGPLAQFIKSKIWSLVSTTRRYLQKGYSTVTLRDGDFYFCYFLWFENET
GYKLEAGDIPILPDNSPPIGMLASDYYRKLLRYYSKNHQGEVVKCYELLTVHLGVIPTEI
ILQHCRQLASKLWEPSRNPLL
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtttgctgatagccagtgagagcgctgaggtcctctttcagtggactgaccca
gaatttcagcagaatgtccaggagcagtacagggcatcccaagaagagggccacgggctt
ccagccttcgaggacagcatcagcactctgtttgctcccatcattatctcctgcagcact
atggtggacaggctgtgtgacagctacacctcctttaccacagaaaacaaccacatctac
gtcctacaccagtttgatgagtgtctctacattgctgtgaatggagacggggaggaggga
gagggtgatctgaggaggaagatctatgtgatgaaaaagatgattgatgtcatgtttggc
atggtcaccctcagcagtaacctcctcaggagagaactgcgtcctcaggacacggagcaa
agggcaaggctgtggaagcatctccagagcctgctggagacctacagccagttacgagag
aacgaccagagcttcttagtggaggcagtggagaggctgatccaccccacgctgtgtgag
cagtgcatcgagttcctggagcgccgtttagttcagcagctcaatggcagtgtagagaga
gcaggagaggaggtgctgcatgccttcatcctgattcacaccaaactgcttgccttctac
tccagccgcaatgcaagctcgctctccacctcagacctcctgactctcatcatcatggca
cagaatatgtatcctagcaacatagacctggatgatacatatcctgaggatgttgagagt
acatccggttctggtcctgacagtttttacacaccagagccctcccctacagacagggac
tcaagcagttcagcagacaaaccagtgagaggaagtactcctgtgtttgagtttgtggac
ccggatgtccagatggcagaggacagtttgcaggctctggaagttcccccgccttcccct
tcaactcctcgcagagtcttcttagaggtctcactcaaagatgggctgtatcccatgatg
cctcactccatgtactgtttgccactgtggccgggcattagccttgtgatgctaactaag
attcctaccagtgctggggccatgtcagtgtatatgtttttggaagcctttgccaagctg
gaaaagcgtttaagtgaaggccaagaaggttctgctgctactagaagccagccgactata
catgacatacgaagcaaactggataaattcattaaagccctggggcctagtgagatacag
tctgcacagttacaaaacgtctggacagagttcaagaaccgagccttttccagaggaggg
cctggcttcaacagagatcttatcccatggtgtaagaatatgaagacccagctgtgtgga
atataccgacaatgttttctcattcaatctggaaaagctgacattcctcaacgtctttct
accagtctgcaggaacgagcccagaccatggtgcaagagaaactgatggactggaaggac
tttctgttggtgaaaagcaagaggaatataaccatggtttcttacctggaggatttccca
ggcctcatccattttatctgcgtggatcgatctaccggccaaatgattgcgccgtcgctt
aacatcactgaacgcaacacgtctgagctggggaagggaccgttggctcagttcatcaaa
agcaagatttggagcctggtcagcacaacacggcgctatctccagaagggttattccacg
gtcacattgcgcgacggagacttctacttctgctacttcctctggtttgaaaatgaaacc
gggtacaagttagaggcaggggacatacccatcctacctgataactctccccccattggg
atgcttgcctcggactactacaggaagctgctgcggtactatagcaagaatcaccagggt
gaagtggtgaagtgttacgagctgctgacagttcacctgggggtcatccccactgagatc
atcctccagcactgcagacagctggcaagcaaactgtgggagccgtcgcgcaacccactg
ctgtag
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